Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:55:36 (142047): wrapper (7.7.26015): starting
14:55:36 (142047): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 14:55:36] Arguments: --nthreads 12
[2026-01-27 14:55:36] Threads: 12
[2026-01-27 14:55:36] Checking for CVMFS
[2026-01-27 14:55:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 14:55:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 14:55:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 14:55:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 14:55:44] 2.13.3.0 27914 203 42864 155571 1 50 2761528 4096001 0 130560 0 122388 99.968 7954 482 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 14:55:44] CVMFS is ok
[2026-01-27 14:55:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 14:55:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 14:55:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 14:55:44] Further information can be found at the LHC@home message board.
[2026-01-27 14:55:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 14:55:44] Checking for apptainer binary...
[2026-01-27 14:55:44] apptainer is not installed, using version from CVMFS
[2026-01-27 14:55:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 14:55:44] stillopo-district-pop
[2026-01-27 14:55:44] apptainer works
[2026-01-27 14:55:44] Set ATHENA_PROC_NUMBER=12
[2026-01-27 14:55:44] Set ATHENA_CORE_NUMBER=12
[2026-01-27 14:55:44] Starting ATLAS job with PandaID=6983602379
[2026-01-27 14:55:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 16:01:41]  *** The last 200 lines of the pilot log: ***
[2026-01-27 16:01:41]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6983602379/log.48329616._000069.job.log.tgz.1
[2026-01-27 16:01:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/a2/log.48329616._000069.job.log.tgz.1
[2026-01-27 16:01:41]  workdir=None
[2026-01-27 16:01:41] ]
[2026-01-27 16:01:41] 2026-01-27 05:01:08,537 | INFO     | transferring file log.48329616._000069.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/log.48329616._000069.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-27 16:01:41] 2026-01-27 05:01:08,537 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/log.48329616._000069.job.log.tgz.1 /var/lib/boinc/slots/0/log.48329616._000069.job
[2026-01-27 16:01:41] 2026-01-27 05:01:08,544 | INFO     | adding to output.list: log.48329616._000069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/a2/log.48329616._000069.job.log.tg
[2026-01-27 16:01:41] 2026-01-27 05:01:08,544 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 16:01:41] 2026-01-27 05:01:08,545 | INFO     | summary of transferred files:
[2026-01-27 16:01:41] 2026-01-27 05:01:08,545 | INFO     |  -- lfn=log.48329616._000069.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 16:01:41] 2026-01-27 05:01:08,545 | INFO     | stage-out finished correctly
[2026-01-27 16:01:41] 2026-01-27 05:01:08,573 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 16:01:41] 2026-01-27 05:01:08,599 | INFO     | job 6983602379 has state=finished
[2026-01-27 16:01:41] 2026-01-27 05:01:08,599 | INFO     | preparing for final server update for job 6983602379 in state='finished'
[2026-01-27 16:01:41] 2026-01-27 05:01:09,314 | WARNING  | process 151052 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 16:01:41] 2026-01-27 05:01:09,314 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4436071 B
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16159 B
[2026-01-27 16:01:41] 2026-01-27 05:01:09,315 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,322 | INFO     | sufficient remaining disk space (226190426112 B)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,322 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,323 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6983602379: 4749174 B (within 5033164800 B limit)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,323 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6983602379/HITS.48329616._000069.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,323 | INFO     | total size of present files: 0 B (workdir size: 4749174 B)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,323 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/HITS.48329616._000069.pool.root.1 since it does not exist
[2026-01-27 16:01:41] 2026-01-27 05:01:09,353 | INFO     | number of running child processes to parent process 151052: 1
[2026-01-27 16:01:41] 2026-01-27 05:01:09,353 | INFO     | maximum number of monitored processes: 6
[2026-01-27 16:01:41] 2026-01-27 05:01:09,714 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,714 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/jobReport.json
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | this job has now completed (state=finished)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | log transfer has been attempted: DONE
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | job 6983602379 has finished - writing final server update
[2026-01-27 16:01:41] 2026-01-27 05:01:09,715 | INFO     | total number of processed events: 400 (read)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6983602379/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | INFO     | extracted standard info from prmon json
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 16:01:41] 2026-01-27 05:01:09,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | fitting pss+swap vs Time
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | sum of square deviations: 57407588.0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | sum of deviations: -9386140089.0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | mean x: 1769488212.0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | mean y: 2947571.0877192984
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | intersect: 289314253311.1256
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | chi2: 0.07955944835127306
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | current memory leak: -163.50 B/s (using 57 data points, chi2=0.08)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | could have reported an average CPU frequency of 2983 MHz (6 samples)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | ..............................
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . Timing measurements:
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . get job = 0 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . initial setup = 7 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . payload setup = 1 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . stage-in = 0 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . payload execution = 3867 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . stage-out = 0 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | . log creation = 0 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,717 | INFO     | ..............................
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | 
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | job summary report
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | --------------------------------------------------
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | PanDA job id: 6983602379
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | task id: 48329616
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | errors: (none)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | pilot state: finished 
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | transexitcode: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | exeerrorcode: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | exeerrordiag: 
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | exitcode: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | exitmsg: OK
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | cpuconsumptiontime: 42613 s
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | nevents: 400
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | neventsw: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | pid: 151052
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | pgrp: 151052
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | corecount: 12
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | event service: False
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | sizes: {0: 2284356, 11: 2284356, 3872: 2310288, 3873: 2319342, 3874: 2319508}
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | --------------------------------------------------
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | 
[2026-01-27 16:01:41] 2026-01-27 05:01:09,840 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,849 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 16:01:41] 2026-01-27 05:01:09,850 | INFO     | job 6983602379 has completed (purged errors)
[2026-01-27 16:01:41] 2026-01-27 05:01:09,850 | INFO     | overall cleanup function is called
[2026-01-27 16:01:41] 2026-01-27 05:01:10,855 | INFO     | --- collectZombieJob: --- 10, [151052]
[2026-01-27 16:01:41] 2026-01-27 05:01:10,855 | INFO     | zombie collector waiting for pid 151052
[2026-01-27 16:01:41] 2026-01-27 05:01:10,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 16:01:41] 2026-01-27 05:01:10,855 | INFO     | collected zombie processes
[2026-01-27 16:01:41] 2026-01-27 05:01:10,855 | INFO     | will attempt to kill all subprocesses of pid=151052
[2026-01-27 16:01:41] 2026-01-27 05:01:10,898 | INFO     | process IDs to be killed: [151052] (in reverse order)
[2026-01-27 16:01:41] 2026-01-27 05:01:10,919 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 16:01:41] 2026-01-27 05:01:10,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 16:01:41] 2026-01-27 05:01:10,921 | INFO     | did not find any defunct processes belonging to 151052
[2026-01-27 16:01:41] 2026-01-27 05:01:10,922 | INFO     | did not find any defunct processes belonging to 151052
[2026-01-27 16:01:41] 2026-01-27 05:01:10,922 | INFO     | ready for new job
[2026-01-27 16:01:41] 2026-01-27 05:01:10,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | **************************************
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | **************************************
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | 
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | architecture information:
[2026-01-27 16:01:41] 2026-01-27 05:01:10,923 | INFO     | executing command: cat /etc/os-release
[2026-01-27 16:01:41] 2026-01-27 05:01:10,929 | INFO     | cat /etc/os-release:
[2026-01-27 16:01:41] NAME="CentOS Linux"
[2026-01-27 16:01:41] VERSION="7 (Core)"
[2026-01-27 16:01:41] ID="centos"
[2026-01-27 16:01:41] ID_LIKE="rhel fedora"
[2026-01-27 16:01:41] VERSION_ID="7"
[2026-01-27 16:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 16:01:41] ANSI_COLOR="0;31"
[2026-01-27 16:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 16:01:41] HOME_URL="https://www.centos.org/"
[2026-01-27 16:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 16:01:41] 
[2026-01-27 16:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 16:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 16:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 16:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 16:01:41] 
[2026-01-27 16:01:41] 2026-01-27 05:01:10,929 | INFO     | **************************************
[2026-01-27 16:01:41] 2026-01-27 05:01:11,431 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | INFO     | sufficient remaining disk space (226195668992 B)
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | INFO     | update_server=False
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 16:01:41] 2026-01-27 05:01:11,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 16:01:41] 2026-01-27 05:01:11,461 | INFO     | all data control threads have been joined
[2026-01-27 16:01:41] 2026-01-27 05:01:11,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 16:01:41] 2026-01-27 05:01:11,669 | INFO     | all job control threads have been joined
[2026-01-27 16:01:41] 2026-01-27 05:01:11,771 | INFO     | all payload control threads have been joined
[2026-01-27 16:01:41] 2026-01-27 05:01:11,856 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 16:01:41] 2026-01-27 05:01:11,856 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 16:01:41] 2026-01-27 05:01:11,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 16:01:41] 2026-01-27 05:01:11,856 | INFO     | will abort loop
[2026-01-27 16:01:41] 2026-01-27 05:01:12,443 | INFO     | [job] queue monitor thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,444 | INFO     | [job] retrieve thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,466 | INFO     | [data] control thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,468 | INFO     | [job] validate thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,511 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,512 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,670 | INFO     | [data] copytool_in thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,674 | INFO     | [job] control thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,776 | INFO     | [payload] control thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:12,861 | INFO     | [job] job monitor thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:13,035 | INFO     | [payload] failed_post thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:13,584 | INFO     | [data] copytool_out thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:13,660 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:13,986 | INFO     | [payload] validate_post thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:14,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 16:01:41] 2026-01-27 05:01:18,609 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:21,689 | INFO     | job.realtimelogging is not enabled
[2026-01-27 16:01:41] 2026-01-27 05:01:22,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 16:01:41] 2026-01-27 05:01:30,607 | INFO     | [monitor] cgroup control has ended
[2026-01-27 16:01:41] 2026-01-27 05:01:32,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130185594857280)>', '<ExcThread(monitor, started 130184485271296)>']
[2026-01-27 16:01:41] 2026-01-27 05:01:37,339 | INFO     | all workflow threads have been joined
[2026-01-27 16:01:41] 2026-01-27 05:01:37,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 16:01:41] 2026-01-27 05:01:37,340 | INFO     | traces error code: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:37,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | INFO     | PID=146433 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 16:01:41] 2026-01-27 05:01:41,290 | INFO     | [monitor] control thread has ended
[2026-01-27 16:01:41] 2026-01-27 05:01:41,331 [wrapper] ==== pilot stdout END ====
[2026-01-27 16:01:41] 2026-01-27 05:01:41,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 16:01:41] 2026-01-27 05:01:41,333 [wrapper] pilotpid: 146433
[2026-01-27 16:01:41] 2026-01-27 05:01:41,334 [wrapper] Pilot exit status: 0
[2026-01-27 16:01:41] 2026-01-27 05:01:41,337 [wrapper] pandaids: 6983602379
[2026-01-27 16:01:41] 2026-01-27 05:01:41,346 [wrapper] cleanup supervisor_pilot  176689 146434
[2026-01-27 16:01:41] 2026-01-27 05:01:41,347 [wrapper] Test setup, not cleaning
[2026-01-27 16:01:41] 2026-01-27 05:01:41,348 [wrapper] apfmon messages muted
[2026-01-27 16:01:41] 2026-01-27 05:01:41,349 [wrapper] ==== wrapper stdout END ====
[2026-01-27 16:01:41] 2026-01-27 05:01:41,349 [wrapper] ==== wrapper stderr END ====
[2026-01-27 16:01:41]  *** Error codes and diagnostics ***
[2026-01-27 16:01:41]     "exeErrorCode": 0,
[2026-01-27 16:01:41]     "exeErrorDiag": "",
[2026-01-27 16:01:41]     "pilotErrorCode": 0,
[2026-01-27 16:01:41]     "pilotErrorDiag": "",
[2026-01-27 16:01:41]  *** Listing of results directory ***
[2026-01-27 16:01:41] total 462660
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc    584422 Jan 26 12:12 pilot3.tar.gz
[2026-01-27 16:01:41] -rwx------ 1 boinc boinc     36322 Jan 26 12:15 runpilot2-wrapper.sh
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc      5111 Jan 26 12:18 queuedata.json
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc       100 Jan 27 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 16:01:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 14:55 run_atlas
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc       105 Jan 27 14:55 job.xml
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc 273174023 Jan 27 14:55 EVNT.48329614._000003.pool.root.1
[2026-01-27 16:01:41] drwxrwx--x 2 boinc boinc      4096 Jan 27 14:55 shared
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc    597772 Jan 27 14:55 input.tar.gz
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:55 start_atlas.sh
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:55 boinc_setup_complete
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc      9377 Jan 27 14:55 init_data.xml
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:55 boinc_lockfile
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc      2606 Jan 27 14:55 pandaJob.out
[2026-01-27 16:01:41] -rw------- 1 boinc boinc   1006433 Jan 27 14:56 agis_schedconf.cvmfs.json
[2026-01-27 16:01:41] -rw------- 1 boinc boinc   1516246 Jan 27 14:56 agis_ddmendpoints.agis.ALL.json
[2026-01-27 16:01:41] -rw------- 1 boinc boinc       448 Jan 27 14:56 workernode_map.json
[2026-01-27 16:01:41] drwx------ 5 boinc boinc      4096 Jan 27 14:56 pilot3
[2026-01-27 16:01:41] -rw------- 1 boinc boinc        95 Jan 27 16:00 pilot_heartbeat.json
[2026-01-27 16:01:41] -rw------- 1 boinc boinc 194720603 Jan 27 16:00 HITS.48329616._000069.pool.root.1
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc       529 Jan 27 16:00 boinc_task_state.xml
[2026-01-27 16:01:41] -rw------- 1 boinc boinc      1040 Jan 27 16:01 memory_monitor_summary.json
[2026-01-27 16:01:41] -rw------- 1 boinc boinc    384214 Jan 27 16:01 log.48329616._000069.job.log.tgz.1
[2026-01-27 16:01:41] -rw------- 1 boinc boinc      6417 Jan 27 16:01 heartbeat.json
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc      8192 Jan 27 16:01 boinc_mmap_file
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc        27 Jan 27 16:01 wrapper_checkpoint.txt
[2026-01-27 16:01:41] -rw------- 1 boinc boinc       746 Jan 27 16:01 pilotlog.txt
[2026-01-27 16:01:41] -rw------- 1 boinc boinc    578517 Jan 27 16:01 log.48329616._000069.job.log.1
[2026-01-27 16:01:41] -rw------- 1 boinc boinc       357 Jan 27 16:01 output.list
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc       620 Jan 27 16:01 runtime_log
[2026-01-27 16:01:41] -rw------- 1 boinc boinc    983040 Jan 27 16:01 result.tar.gz
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc      8842 Jan 27 16:01 runtime_log.err
[2026-01-27 16:01:41] -rw------- 1 boinc boinc       662 Jan 27 16:01 HoNLDmONQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZH2KDmPXUGqm.diag
[2026-01-27 16:01:41] -rw-r--r-- 1 boinc boinc     22631 Jan 27 16:01 stderr.txt
[2026-01-27 16:01:41] HITS file was successfully produced:
[2026-01-27 16:01:41] -rw------- 1 boinc boinc 194720603 Jan 27 16:00 shared/HITS.pool.root.1
[2026-01-27 16:01:41]  *** Contents of shared directory: ***
[2026-01-27 16:01:41] total 458500
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc 273174023 Jan 27 14:55 ATLAS.root_0
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc    597772 Jan 27 14:55 input.tar.gz
[2026-01-27 16:01:41] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:55 start_atlas.sh
[2026-01-27 16:01:41] -rw------- 1 boinc boinc 194720603 Jan 27 16:00 HITS.pool.root.1
[2026-01-27 16:01:41] -rw------- 1 boinc boinc    983040 Jan 27 16:01 result.tar.gz
16:01:42 (142047): run_atlas exited; CPU time 42640.309405
16:01:42 (142047): called boinc_finish(0)

</stderr_txt>
]]>

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