Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:07:10 (1541735): wrapper (7.7.26015): starting
21:07:10 (1541735): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 21:07:10] Arguments: --nthreads 12
[2026-01-27 21:07:10] Threads: 12
[2026-01-27 21:07:10] Checking for CVMFS
[2026-01-27 21:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 21:07:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 21:07:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 21:07:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 21:07:11] 2.13.1.0 2787 3212 71964 155598 1 50 2901958 4096001 1002 130560 0 4565629 99.956 347155 1163 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 21:07:11] CVMFS is ok
[2026-01-27 21:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 21:07:11] Checking for apptainer binary...
[2026-01-27 21:07:11] apptainer is not installed, using version from CVMFS
[2026-01-27 21:07:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 21:07:11] ryzen7
[2026-01-27 21:07:11] apptainer works
[2026-01-27 21:07:11] Set ATHENA_PROC_NUMBER=12
[2026-01-27 21:07:11] Set ATHENA_CORE_NUMBER=12
[2026-01-27 21:07:11] Starting ATLAS job with PandaID=6984042489
[2026-01-27 21:07:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 22:24:42]  *** The last 200 lines of the pilot log: ***
[2026-01-27 22:24:42]  mtime=0
[2026-01-27 22:24:42]  protocol_id=None
[2026-01-27 22:24:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 22:24:42]  replicas=None
[2026-01-27 22:24:42]  scope=mc23_13p6TeV
[2026-01-27 22:24:42]  status=None
[2026-01-27 22:24:42]  status_code=0
[2026-01-27 22:24:42]  storage_token=
[2026-01-27 22:24:42]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984042489/log.47929392._005190.job.log.tgz.1
[2026-01-27 22:24:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/1e/log.47929392._005190.job.log.tgz.1
[2026-01-27 22:24:42]  workdir=None
[2026-01-27 22:24:42] ]
[2026-01-27 22:24:42] 2026-01-27 22:23:36,768 | INFO     | transferring file log.47929392._005190.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984042489/log.47929392._005190.job.log.tgz.1 t
[2026-01-27 22:24:42] 2026-01-27 22:23:36,768 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984042489/log.47929392._005190.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-27 22:24:42] 2026-01-27 22:23:36,990 | INFO     | adding to output.list: log.47929392._005190.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/1e/log.47929392._005190.job.log.tg
[2026-01-27 22:24:42] 2026-01-27 22:23:36,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 22:24:42] 2026-01-27 22:23:36,990 | INFO     | summary of transferred files:
[2026-01-27 22:24:42] 2026-01-27 22:23:36,990 | INFO     |  -- lfn=log.47929392._005190.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 22:24:42] 2026-01-27 22:23:36,991 | INFO     | stage-out finished correctly
[2026-01-27 22:24:42] 2026-01-27 22:23:37,124 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 22:24:42] 2026-01-27 22:23:38,598 | INFO     | time since job start (4569s) is within the limit (349056.0s)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,410 | INFO     | job 6984042489 has state=finished
[2026-01-27 22:24:42] 2026-01-27 22:23:39,410 | INFO     | preparing for final server update for job 6984042489 in state='finished'
[2026-01-27 22:24:42] 2026-01-27 22:23:39,410 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984042489/jobReport.json
[2026-01-27 22:24:42] 2026-01-27 22:23:39,411 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/2/workernode_map.json
[2026-01-27 22:24:42] 2026-01-27 22:23:39,412 | INFO     | this job has now completed (state=finished)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,412 | INFO     | log transfer has been attempted: DONE
[2026-01-27 22:24:42] 2026-01-27 22:23:39,412 | INFO     | job 6984042489 has finished - writing final server update
[2026-01-27 22:24:42] 2026-01-27 22:23:39,412 | INFO     | total number of processed events: 400 (read)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984042489/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | INFO     | extracted standard info from prmon json
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 22:24:42] 2026-01-27 22:23:39,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 22:24:42] 2026-01-27 22:23:39,437 | INFO     | fitting pss+swap vs Time
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | sum of square deviations: 97479037.0
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | sum of deviations: 489097.9999999767
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | mean x: 1769550413.5
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | mean y: 2718199.970588235
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | intersect: -6160463.532642534
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | chi2: 0.006571066815800805
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | current memory leak: 0.01 B/s (using 68 data points, chi2=0.01)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,438 | INFO     | could have reported an average CPU frequency of 3990 MHz (6 samples)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | ..............................
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . Timing measurements:
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . get job = 0 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . initial setup = 3 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . payload setup = 2 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . stage-in = 0 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . payload execution = 4548 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . stage-out = 1 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | . log creation = 0 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,439 | INFO     | ..............................
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | 
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | job summary report
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | --------------------------------------------------
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | PanDA job id: 6984042489
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | task id: 47929392
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | errors: (none)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | pilot state: finished 
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | transexitcode: 0
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | exeerrorcode: 0
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | exeerrordiag: 
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | exitcode: 0
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | exitmsg: OK
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | cpuconsumptiontime: 24232 s
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | nevents: 400
[2026-01-27 22:24:42] 2026-01-27 22:23:39,582 | INFO     | neventsw: 0
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | pid: 1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | pgrp: 1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | corecount: 12
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | event service: False
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | sizes: {0: 2284304, 11: 2284304, 4554: 2310558, 4557: 2319658, 4559: 2319796}
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | --------------------------------------------------
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | 
[2026-01-27 22:24:42] 2026-01-27 22:23:39,583 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | job 6984042489 has completed (purged errors)
[2026-01-27 22:24:42] 2026-01-27 22:23:39,659 | INFO     | overall cleanup function is called
[2026-01-27 22:24:42] 2026-01-27 22:23:39,767 | INFO     | PID=1545833 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 22:24:42] 2026-01-27 22:23:39,767 | INFO     | .. there are 3 such processes running
[2026-01-27 22:24:42] 2026-01-27 22:23:40,643 | WARNING  | process 1550394 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 22:24:42] 2026-01-27 22:23:40,666 | INFO     | --- collectZombieJob: --- 10, [1550394]
[2026-01-27 22:24:42] 2026-01-27 22:23:40,666 | INFO     | zombie collector waiting for pid 1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:40,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 22:24:42] 2026-01-27 22:23:40,666 | INFO     | collected zombie processes
[2026-01-27 22:24:42] 2026-01-27 22:23:40,666 | INFO     | will attempt to kill all subprocesses of pid=1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:40,769 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 22:24:42] 2026-01-27 22:23:40,769 | INFO     | reaping zombies for max 20 seconds
[2026-01-27 22:24:42] 2026-01-27 22:23:40,810 | INFO     | checking for looping job (in state=finished)
[2026-01-27 22:24:42] 2026-01-27 22:23:40,810 | INFO     | using looping job limit: 7200 s
[2026-01-27 22:24:42] 2026-01-27 22:23:40,858 | INFO     | process IDs to be killed: [1550394] (in reverse order)
[2026-01-27 22:24:42] 2026-01-27 22:23:40,969 | INFO     | number of running child processes to parent process 1550394: 1
[2026-01-27 22:24:42] 2026-01-27 22:23:40,969 | INFO     | maximum number of monitored processes: 6
[2026-01-27 22:24:42] 2026-01-27 22:23:40,969 | INFO     | aborting job monitoring since job object (job id=6984042489) has expired
[2026-01-27 22:24:42] 2026-01-27 22:23:41,022 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 22:24:42] 2026-01-27 22:23:41,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 22:24:42] 2026-01-27 22:23:41,024 | INFO     | did not find any defunct processes belonging to 1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:41,025 | INFO     | did not find any defunct processes belonging to 1550394
[2026-01-27 22:24:42] 2026-01-27 22:23:41,025 | INFO     | ready for new job
[2026-01-27 22:24:42] 2026-01-27 22:23:41,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 22:24:42] 2026-01-27 22:23:41,026 | INFO     | **************************************
[2026-01-27 22:24:42] 2026-01-27 22:23:41,027 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 22:24:42] 2026-01-27 22:23:41,027 | INFO     | **************************************
[2026-01-27 22:24:42] 2026-01-27 22:23:41,027 | INFO     | 
[2026-01-27 22:24:42] 2026-01-27 22:23:41,050 | INFO     | architecture information:
[2026-01-27 22:24:42] 2026-01-27 22:23:41,050 | INFO     | executing command: cat /etc/os-release
[2026-01-27 22:24:42] 2026-01-27 22:23:41,162 | INFO     | cat /etc/os-release:
[2026-01-27 22:24:42] NAME="CentOS Linux"
[2026-01-27 22:24:42] VERSION="7 (Core)"
[2026-01-27 22:24:42] ID="centos"
[2026-01-27 22:24:42] ID_LIKE="rhel fedora"
[2026-01-27 22:24:42] VERSION_ID="7"
[2026-01-27 22:24:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 22:24:42] ANSI_COLOR="0;31"
[2026-01-27 22:24:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 22:24:42] HOME_URL="https://www.centos.org/"
[2026-01-27 22:24:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 22:24:42] 
[2026-01-27 22:24:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 22:24:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 22:24:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 22:24:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 22:24:42] 
[2026-01-27 22:24:42] 2026-01-27 22:23:41,162 | INFO     | **************************************
[2026-01-27 22:24:42] 2026-01-27 22:23:41,666 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-27 22:24:42] 2026-01-27 22:23:41,754 | INFO     | sufficient remaining disk space (150980263936 B)
[2026-01-27 22:24:42] 2026-01-27 22:23:41,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 22:24:42] 2026-01-27 22:23:41,754 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 22:24:42] 2026-01-27 22:23:41,754 | INFO     | update_server=False
[2026-01-27 22:24:42] 2026-01-27 22:23:41,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 22:24:42] 2026-01-27 22:23:41,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 22:24:42] 2026-01-27 22:23:41,758 | INFO     | will abort loop
[2026-01-27 22:24:42] 2026-01-27 22:23:42,522 | INFO     | all payload control threads have been joined
[2026-01-27 22:24:42] 2026-01-27 22:23:42,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 22:24:42] 2026-01-27 22:23:42,762 | INFO     | [job] retrieve thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:42,766 | INFO     | [job] job monitor thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:42,806 | INFO     | all data control threads have been joined
[2026-01-27 22:24:42] 2026-01-27 22:23:42,810 | INFO     | all job control threads have been joined
[2026-01-27 22:24:42] 2026-01-27 22:23:42,902 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:42,990 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 22:24:42] 2026-01-27 22:23:43,530 | INFO     | [payload] control thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,590 | INFO     | [job] validate thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,690 | INFO     | [payload] validate_post thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,718 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,810 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,814 | INFO     | [data] control thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:43,814 | INFO     | [job] control thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:44,078 | INFO     | [data] copytool_in thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:44,122 | INFO     | [payload] failed_post thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:44,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 22:24:42] 2026-01-27 22:23:44,666 | INFO     | [data] copytool_out thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:45,626 | INFO     | [job] queue monitor thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:23:47,306 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 22:24:42] 2026-01-27 22:24:11,914 | INFO     | PID=1545833 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 22:24:42] 2026-01-27 22:24:11,914 | INFO     | .. there are 3 such processes running
[2026-01-27 22:24:42] 2026-01-27 22:24:11,914 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 22:24:42] 2026-01-27 22:24:11,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 22:24:42] 2026-01-27 22:24:11,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 22:24:42] 2026-01-27 22:24:36,383 | INFO     | [monitor] cgroup control has ended
[2026-01-27 22:24:42] 2026-01-27 22:24:37,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746041329472)>', '<ExcThread(monitor, started 139745610950400)>']
[2026-01-27 22:24:42] 2026-01-27 22:24:38,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 22:24:42] 2026-01-27 22:24:38,019 | INFO     | [monitor] control thread has ended
[2026-01-27 22:24:42] 2026-01-27 22:24:42,802 | INFO     | all workflow threads have been joined
[2026-01-27 22:24:42] 2026-01-27 22:24:42,802 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 22:24:42] 2026-01-27 22:24:42,802 | INFO     | traces error code: 0
[2026-01-27 22:24:42] 2026-01-27 22:24:42,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 22:24:42] 2026-01-27 22:24:42,850 [wrapper] ==== pilot stdout END ====
[2026-01-27 22:24:42] 2026-01-27 22:24:42,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 22:24:42] 2026-01-27 22:24:42,853 [wrapper] pilotpid: 1545833
[2026-01-27 22:24:42] 2026-01-27 22:24:42,855 [wrapper] Pilot exit status: 0
[2026-01-27 22:24:42] 2026-01-27 22:24:42,860 [wrapper] pandaids: 6984042489
[2026-01-27 22:24:42] 2026-01-27 22:24:42,876 [wrapper] cleanup supervisor_pilot 1581345 1545834
[2026-01-27 22:24:42] 2026-01-27 22:24:42,878 [wrapper] Test setup, not cleaning
[2026-01-27 22:24:42] 2026-01-27 22:24:42,880 [wrapper] apfmon messages muted
[2026-01-27 22:24:42] 2026-01-27 22:24:42,881 [wrapper] ==== wrapper stdout END ====
[2026-01-27 22:24:42] 2026-01-27 22:24:42,882 [wrapper] ==== wrapper stderr END ====
[2026-01-27 22:24:42]  *** Error codes and diagnostics ***
[2026-01-27 22:24:42]     "exeErrorCode": 0,
[2026-01-27 22:24:42]     "exeErrorDiag": "",
[2026-01-27 22:24:42]     "pilotErrorCode": 0,
[2026-01-27 22:24:42]     "pilotErrorDiag": "",
[2026-01-27 22:24:42]  *** Listing of results directory ***
[2026-01-27 22:24:42] total 434352
[2026-01-27 22:24:42] -rw-r--r-- 1 boinc boinc    584422 Jan 26 05:14 pilot3.tar.gz
[2026-01-27 22:24:42] -rwx------ 1 boinc boinc     36322 Jan 26 05:17 runpilot2-wrapper.sh
[2026-01-27 22:24:42] -rw-r--r-- 1 boinc boinc      5111 Jan 26 05:21 queuedata.json
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc       100 Jan 27 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 22:24:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 21:07 run_atlas
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc       105 Jan 27 21:07 job.xml
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc     15845 Jan 27 21:07 start_atlas.sh
[2026-01-27 22:24:42] drwxrwx--x 2 boinc boinc      4096 Jan 27 21:07 shared
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc    597753 Jan 27 21:07 input.tar.gz
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc      6935 Jan 27 21:07 init_data.xml
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc 252528317 Jan 27 21:07 EVNT.47929390._000201.pool.root.1
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc         0 Jan 27 21:07 boinc_setup_complete
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc         0 Jan 27 21:07 boinc_lockfile
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc      2551 Jan 27 21:07 pandaJob.out
[2026-01-27 22:24:42] -rw------- 1 boinc boinc   1005244 Jan 27 21:07 agis_schedconf.cvmfs.json
[2026-01-27 22:24:42] -rw------- 1 boinc boinc   1516246 Jan 27 21:07 agis_ddmendpoints.agis.ALL.json
[2026-01-27 22:24:42] -rw------- 1 boinc boinc       414 Jan 27 21:07 workernode_map.json
[2026-01-27 22:24:42] drwx------ 5 boinc boinc      4096 Jan 27 21:07 pilot3
[2026-01-27 22:24:42] -rw------- 1 boinc boinc 186153501 Jan 27 22:22 HITS.47929392._005190.pool.root.1
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc       529 Jan 27 22:23 boinc_task_state.xml
[2026-01-27 22:24:42] -rw------- 1 boinc boinc        95 Jan 27 22:23 pilot_heartbeat.json
[2026-01-27 22:24:42] -rw------- 1 boinc boinc      1016 Jan 27 22:23 memory_monitor_summary.json
[2026-01-27 22:24:42] -rw------- 1 boinc boinc    379436 Jan 27 22:23 log.47929392._005190.job.log.tgz.1
[2026-01-27 22:24:42] -rw------- 1 boinc boinc      6260 Jan 27 22:23 heartbeat.json
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 22:24 boinc_mmap_file
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc        27 Jan 27 22:24 wrapper_checkpoint.txt
[2026-01-27 22:24:42] -rw------- 1 boinc boinc      4845 Jan 27 22:24 pilotlog.txt
[2026-01-27 22:24:42] -rw------- 1 boinc boinc    695298 Jan 27 22:24 log.47929392._005190.job.log.1
[2026-01-27 22:24:42] -rw------- 1 boinc boinc       357 Jan 27 22:24 output.list
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc       620 Jan 27 22:24 runtime_log
[2026-01-27 22:24:42] -rw------- 1 boinc boinc   1095680 Jan 27 22:24 result.tar.gz
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc      9156 Jan 27 22:24 runtime_log.err
[2026-01-27 22:24:42] -rw------- 1 boinc boinc       649 Jan 27 22:24 9q7KDmu9T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1C9KDmqOAZ3n.diag
[2026-01-27 22:24:42] -rw-rw-r-- 1 boinc boinc     21588 Jan 27 22:24 stderr.txt
[2026-01-27 22:24:42] HITS file was successfully produced:
[2026-01-27 22:24:42] -rw------- 1 boinc boinc 186153501 Jan 27 22:22 shared/HITS.pool.root.1
[2026-01-27 22:24:42]  *** Contents of shared directory: ***
[2026-01-27 22:24:42] total 430084
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc     15845 Jan 27 21:07 start_atlas.sh
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc    597753 Jan 27 21:07 input.tar.gz
[2026-01-27 22:24:42] -rw-r--r-- 2 boinc boinc 252528317 Jan 27 21:07 ATLAS.root_0
[2026-01-27 22:24:42] -rw------- 1 boinc boinc 186153501 Jan 27 22:22 HITS.pool.root.1
[2026-01-27 22:24:42] -rw------- 1 boinc boinc   1095680 Jan 27 22:24 result.tar.gz
22:24:44 (1541735): run_atlas exited; CPU time 24252.107239
22:24:44 (1541735): called boinc_finish(0)

</stderr_txt>
]]>

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