Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:49 (22624): wrapper (7.7.26015): starting
18:52:49 (22624): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:52:49] Arguments: --nthreads 12
[2026-01-26 18:52:49] Threads: 12
[2026-01-26 18:52:49] Checking for CVMFS
[2026-01-26 18:52:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:52:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:52:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:52:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:52:49] 2.11.2.0 28623 368830 97684 155566 2 52 12705482 20275201 1 130560 4 159050240 99.949 21690680 16443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 18:52:49] CVMFS is ok
[2026-01-26 18:52:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:52:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:52:49] Further information can be found at the LHC@home message board.
[2026-01-26 18:52:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:52:49] Checking for apptainer binary...
[2026-01-26 18:52:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:52:49] Running /usr/bin/apptainer --version
[2026-01-26 18:52:49] apptainer version 1.3.2-1.el7
[2026-01-26 18:52:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:52:51] c-205-20.aglt2.org
[2026-01-26 18:52:51] apptainer works
[2026-01-26 18:52:51] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:52:51] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:52:51] Starting ATLAS job with PandaID=6977184704
[2026-01-26 18:52:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:08:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:08:24]  lfn=log.48298283._000464.job.log.tgz.1
[2026-01-26 20:08:24]  mtime=0
[2026-01-26 20:08:24]  protocol_id=None
[2026-01-26 20:08:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 20:08:24]  replicas=None
[2026-01-26 20:08:24]  scope=mc23_13p6TeV
[2026-01-26 20:08:24]  status=None
[2026-01-26 20:08:24]  status_code=0
[2026-01-26 20:08:24]  storage_token=
[2026-01-26 20:08:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6977184704/log.48298283._000464.job.log.tgz.1
[2026-01-26 20:08:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/44/log.48298283._000464.job.log.tgz.1
[2026-01-26 20:08:24]  workdir=None
[2026-01-26 20:08:24] ]
[2026-01-26 20:08:24] 2026-01-27 01:07:47,779 | INFO     | transferring file log.48298283._000464.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6977184704/log.48298283._000464.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 20:08:24] 2026-01-27 01:07:47,780 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6977184704/log.48298283._000464.job.log.tgz.1 /tmp/boinchome/slots/0/log.48298283._000464.job
[2026-01-26 20:08:24] 2026-01-27 01:07:47,801 | INFO     | adding to output.list: log.48298283._000464.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/44/log.48298283._000464.job.log.tg
[2026-01-26 20:08:24] 2026-01-27 01:07:47,802 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 20:08:24] 2026-01-27 01:07:47,802 | INFO     | summary of transferred files:
[2026-01-26 20:08:24] 2026-01-27 01:07:47,802 | INFO     |  -- lfn=log.48298283._000464.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 20:08:24] 2026-01-27 01:07:47,803 | INFO     | stage-out finished correctly
[2026-01-26 20:08:24] 2026-01-27 01:07:49,294 | INFO     | time since job start (4479s) is within the limit (349056.0s)
[2026-01-26 20:08:24] 2026-01-27 01:07:49,655 | WARNING  | process 30763 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:08:24] 2026-01-27 01:07:49,655 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6977184704/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:08:24] 2026-01-27 01:07:49,742 | INFO     | number of running child processes to parent process 30763: 1
[2026-01-26 20:08:24] 2026-01-27 01:07:49,742 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:08:24] 2026-01-27 01:07:51,114 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 20:08:24] 2026-01-27 01:07:51,300 | INFO     | time since job start (4481s) is within the limit (349056.0s)
[2026-01-26 20:08:24] 2026-01-27 01:07:52,246 | INFO     | monitor loop #340: job 0:6977184704 is in state 'finished'
[2026-01-26 20:08:24] 2026-01-27 01:07:52,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 20:08:24] 2026-01-27 01:07:52,415 | INFO     | PID=26370 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,169 | INFO     | job 6977184704 has state=finished
[2026-01-26 20:08:24] 2026-01-27 01:07:53,169 | INFO     | preparing for final server update for job 6977184704 in state='finished'
[2026-01-26 20:08:24] 2026-01-27 01:07:53,169 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6977184704/jobReport.json
[2026-01-26 20:08:24] 2026-01-27 01:07:53,173 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 20:08:24] 2026-01-27 01:07:53,173 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,173 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,174 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:08:24] 2026-01-27 01:07:53,174 | INFO     | job 6977184704 has finished - writing final server update
[2026-01-26 20:08:24] 2026-01-27 01:07:53,174 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,177 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6977184704/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,178 | INFO     | extracted standard info from prmon json
[2026-01-26 20:08:24] 2026-01-27 01:07:53,178 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:08:24] 2026-01-27 01:07:53,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:08:24] 2026-01-27 01:07:53,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:08:24] 2026-01-27 01:07:53,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | sum of square deviations: 89127252.5
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | sum of deviations: -5498841157.0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | mean x: 1769473901.5
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | mean y: 2761554.0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,180 | INFO     | intersect: 109173140342.52559
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | chi2: 0.05934366505044005
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | current memory leak: -61.70 B/s (using 66 data points, chi2=0.06)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | ..............................
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | . Timing measurements:
[2026-01-26 20:08:24] 2026-01-27 01:07:53,181 | INFO     | . get job = 0 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . initial setup = 7 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . payload setup = 7 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . stage-in = 0 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . payload execution = 4454 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . stage-out = 0 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | . log creation = 0 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,182 | INFO     | ..............................
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | job summary report
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | --------------------------------------------------
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | PanDA job id: 6977184704
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | task id: 48298283
[2026-01-26 20:08:24] 2026-01-27 01:07:53,261 | INFO     | errors: (none)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | pilot state: finished 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | transexitcode: 0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | exeerrorcode: 0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | exeerrordiag: 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,262 | INFO     | exitcode: 0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | exitmsg: OK
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | cpuconsumptiontime: 48379 s
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | nevents: 400
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | neventsw: 0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | pid: 30763
[2026-01-26 20:08:24] 2026-01-27 01:07:53,263 | INFO     | pgrp: 30763
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | corecount: 12
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | event service: False
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | sizes: {0: 2284166, 1: 2284372, 11: 2284400, 4465: 2310484, 4466: 2319482, 4469: 2319538, 4471: 2319860}
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | --------------------------------------------------
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | 
[2026-01-26 20:08:24] 2026-01-27 01:07:53,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 20:08:24] 2026-01-27 01:07:53,287 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,287 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,288 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,288 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | job 6977184704 has completed (purged errors)
[2026-01-26 20:08:24] 2026-01-27 01:07:53,290 | INFO     | overall cleanup function is called
[2026-01-26 20:08:24] 2026-01-27 01:07:54,298 | INFO     | --- collectZombieJob: --- 10, [30763]
[2026-01-26 20:08:24] 2026-01-27 01:07:54,298 | INFO     | zombie collector waiting for pid 30763
[2026-01-26 20:08:24] 2026-01-27 01:07:54,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:08:24] 2026-01-27 01:07:54,298 | INFO     | collected zombie processes
[2026-01-26 20:08:24] 2026-01-27 01:07:54,299 | INFO     | will attempt to kill all subprocesses of pid=30763
[2026-01-26 20:08:24] 2026-01-27 01:07:54,391 | INFO     | process IDs to be killed: [30763] (in reverse order)
[2026-01-26 20:08:24] 2026-01-27 01:07:54,443 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:08:24] 2026-01-27 01:07:54,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:08:24] 2026-01-27 01:07:54,447 | INFO     | did not find any defunct processes belonging to 30763
[2026-01-26 20:08:24] 2026-01-27 01:07:54,450 | INFO     | did not find any defunct processes belonging to 30763
[2026-01-26 20:08:24] 2026-01-27 01:07:54,450 | INFO     | ready for new job
[2026-01-26 20:08:24] 2026-01-27 01:07:54,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:08:24] 2026-01-27 01:07:54,452 | INFO     | **************************************
[2026-01-26 20:08:24] 2026-01-27 01:07:54,452 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:08:24] 2026-01-27 01:07:54,452 | INFO     | **************************************
[2026-01-26 20:08:24] 2026-01-27 01:07:54,452 | INFO     | 
[2026-01-26 20:08:24] 2026-01-27 01:07:54,453 | INFO     | architecture information:
[2026-01-26 20:08:24] 2026-01-27 01:07:54,453 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:08:24] 2026-01-27 01:07:54,468 | INFO     | cat /etc/os-release:
[2026-01-26 20:08:24] NAME="CentOS Linux"
[2026-01-26 20:08:24] VERSION="7 (Core)"
[2026-01-26 20:08:24] ID="centos"
[2026-01-26 20:08:24] ID_LIKE="rhel fedora"
[2026-01-26 20:08:24] VERSION_ID="7"
[2026-01-26 20:08:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:08:24] ANSI_COLOR="0;31"
[2026-01-26 20:08:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:08:24] HOME_URL="https://www.centos.org/"
[2026-01-26 20:08:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:08:24] 
[2026-01-26 20:08:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:08:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:08:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:08:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:08:24] 
[2026-01-26 20:08:24] 2026-01-27 01:07:54,468 | INFO     | **************************************
[2026-01-26 20:08:24] 2026-01-27 01:07:54,971 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 20:08:24] 2026-01-27 01:07:54,987 | INFO     | sufficient remaining disk space (29281484800 B)
[2026-01-26 20:08:24] 2026-01-27 01:07:54,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:08:24] 2026-01-27 01:07:54,988 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:08:24] 2026-01-27 01:07:54,988 | INFO     | update_server=False
[2026-01-26 20:08:24] 2026-01-27 01:07:54,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:08:24] 2026-01-27 01:07:54,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:08:24] 2026-01-27 01:07:55,003 | INFO     | all job control threads have been joined
[2026-01-26 20:08:24] 2026-01-27 01:07:55,568 | INFO     | all payload control threads have been joined
[2026-01-26 20:08:24] 2026-01-27 01:07:55,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:08:24] 2026-01-27 01:07:55,769 | INFO     | aborting loop
[2026-01-26 20:08:24] 2026-01-27 01:07:55,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:08:24] 2026-01-27 01:07:55,991 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:55,994 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:55,995 | INFO     | all data control threads have been joined
[2026-01-26 20:08:24] 2026-01-27 01:07:56,008 | INFO     | [job] control thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,021 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,022 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,065 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,211 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,573 | INFO     | [payload] control thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,774 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:56,873 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:57,000 | INFO     | [data] control thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:57,108 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:57,193 | INFO     | [job] validate thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:07:57,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:08:24] 2026-01-27 01:07:57,899 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:08:01,206 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:08:03,110 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-26 20:08:24] 2026-01-27 01:08:05,792 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:08:24] 2026-01-27 01:08:06,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:08:24] 2026-01-27 01:08:17,125 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:08:24] 2026-01-27 01:08:18,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679910876992)>', '<ExcThread(monitor, started 139679156389632)>']
[2026-01-26 20:08:24] 2026-01-27 01:08:23,962 | INFO     | all workflow threads have been joined
[2026-01-26 20:08:24] 2026-01-27 01:08:23,963 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:08:24] 2026-01-27 01:08:23,963 | INFO     | traces error code: 0
[2026-01-26 20:08:24] 2026-01-27 01:08:23,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:08:24] 2026-01-27 01:08:24,615 | INFO     | PID=26370 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 20:08:24] 2026-01-27 01:08:24,615 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:08:24] 2026-01-27 01:08:24,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:08:24] 2026-01-27 01:08:24,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:08:24] 2026-01-27 01:08:24,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:08:24] 2026-01-27 01:08:24,616 | INFO     | [monitor] control thread has ended
[2026-01-26 20:08:24] 2026-01-27 01:08:24,699 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:08:24] 2026-01-27 01:08:24,703 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:08:24] 2026-01-27 01:08:24,707 [wrapper] pilotpid: 26370
[2026-01-26 20:08:24] 2026-01-27 01:08:24,710 [wrapper] Pilot exit status: 0
[2026-01-26 20:08:24] 2026-01-27 01:08:24,726 [wrapper] pandaids: 6977184704
[2026-01-26 20:08:24] 2026-01-27 01:08:24,764 [wrapper] cleanup supervisor_pilot 20887 26371
[2026-01-26 20:08:24] 2026-01-27 01:08:24,768 [wrapper] Test setup, not cleaning
[2026-01-26 20:08:24] 2026-01-27 01:08:24,772 [wrapper] apfmon messages muted
[2026-01-26 20:08:24] 2026-01-27 01:08:24,775 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:08:24] 2026-01-27 01:08:24,779 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:08:24]  *** Error codes and diagnostics ***
[2026-01-26 20:08:24]     "exeErrorCode": 0,
[2026-01-26 20:08:24]     "exeErrorDiag": "",
[2026-01-26 20:08:24]     "pilotErrorCode": 0,
[2026-01-26 20:08:24]     "pilotErrorDiag": "",
[2026-01-26 20:08:24]  *** Listing of results directory ***
[2026-01-26 20:08:24] total 428260
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas    584422 Jan 20 22:29 pilot3.tar.gz
[2026-01-26 20:08:24] -rwx------ 1 boincer umatlas     36322 Jan 20 22:30 runpilot2-wrapper.sh
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas      5111 Jan 20 22:31 queuedata.json
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas       100 Jan 26 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:08:24] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 18:52 run_atlas
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas       105 Jan 26 18:52 job.xml
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas 256197655 Jan 26 18:52 EVNT.48298280._000019.pool.root.1
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:52 start_atlas.sh
[2026-01-26 20:08:24] drwxrwx--x 2 boincer umatlas      4096 Jan 26 18:52 shared
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas    597774 Jan 26 18:52 input.tar.gz
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas         0 Jan 26 18:52 boinc_lockfile
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas      2621 Jan 26 18:52 pandaJob.out
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas        57 Jan 26 18:52 setup.sh.local
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas   1006441 Jan 26 18:53 agis_schedconf.cvmfs.json
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas   1516246 Jan 26 18:53 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas       445 Jan 26 18:53 workernode_map.json
[2026-01-26 20:08:24] drwx------ 5 boincer umatlas      4096 Jan 26 18:53 pilot3
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 20:01 init_data.xml
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas 176323500 Jan 26 20:07 HITS.48298283._000464.pool.root.1
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas       529 Jan 26 20:07 boinc_task_state.xml
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas      1044 Jan 26 20:07 memory_monitor_summary.json
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas    387603 Jan 26 20:07 log.48298283._000464.job.log.tgz.1
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas      6416 Jan 26 20:07 heartbeat.json
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas        27 Jan 26 20:08 wrapper_checkpoint.txt
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 20:08 boinc_mmap_file
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas        95 Jan 26 20:08 pilot_heartbeat.json
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas       745 Jan 26 20:08 pilotlog.txt
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas    653084 Jan 26 20:08 log.48298283._000464.job.log.1
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas       357 Jan 26 20:08 output.list
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas       620 Jan 26 20:08 runtime_log
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas   1054720 Jan 26 20:08 result.tar.gz
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 20:08 runtime_log.err
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas       659 Jan 26 20:08 2CULDm75d28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWHrKDmfxeEHn.diag
[2026-01-26 20:08:24] -rw-r--r-- 1 boincer umatlas     21732 Jan 26 20:08 stderr.txt
[2026-01-26 20:08:24] HITS file was successfully produced:
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas 176323500 Jan 26 20:07 shared/HITS.pool.root.1
[2026-01-26 20:08:24]  *** Contents of shared directory: ***
[2026-01-26 20:08:24] total 424024
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas 256197655 Jan 26 18:52 ATLAS.root_0
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:52 start_atlas.sh
[2026-01-26 20:08:24] -rw-r--r-- 2 boincer umatlas    597774 Jan 26 18:52 input.tar.gz
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas 176323500 Jan 26 20:07 HITS.pool.root.1
[2026-01-26 20:08:24] -rw------- 1 boincer umatlas   1054720 Jan 26 20:08 result.tar.gz
20:08:25 (22624): run_atlas exited; CPU time 48347.129722
20:08:25 (22624): called boinc_finish(0)

</stderr_txt>
]]>

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