Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:36 (977680): wrapper (7.7.26015): starting
19:00:36 (977680): wrapper: running run_atlas (--nthreads 11)
[2026-01-26 19:00:36] Arguments: --nthreads 11
[2026-01-26 19:00:36] Threads: 11
[2026-01-26 19:00:36] Checking for CVMFS
[2026-01-26 19:00:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:00:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:00:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:00:37] 2.13.3.0 9582 118560 245956 155566 1 761 33002802 40960001 36171 16776704 0 1342860600 99.720 990293862 48883 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 19:00:37] CVMFS is ok
[2026-01-26 19:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:00:37] Further information can be found at the LHC@home message board.
[2026-01-26 19:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:00:37] Checking for apptainer binary...
[2026-01-26 19:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:00:37] Running /usr/bin/apptainer --version
[2026-01-26 19:00:37] apptainer version 1.4.5-2.el9
[2026-01-26 19:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:00:39] c8-7-4.aglt2.org
[2026-01-26 19:00:39] apptainer works
[2026-01-26 19:00:40] Set ATHENA_PROC_NUMBER=11
[2026-01-26 19:00:40] Set ATHENA_CORE_NUMBER=11
[2026-01-26 19:00:40] Starting ATLAS job with PandaID=6982026468
[2026-01-26 19:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:57:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:57:24]  guid=516e81dd-e4e3-405a-bb88-c5995f5a95ac
[2026-01-26 19:57:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 19:57:24]  is_altstaged=None
[2026-01-26 19:57:24]  is_tar=False
[2026-01-26 19:57:24]  lfn=log.48310826._007865.job.log.tgz.1
[2026-01-26 19:57:24]  mtime=0
[2026-01-26 19:57:24]  protocol_id=None
[2026-01-26 19:57:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:57:24]  replicas=None
[2026-01-26 19:57:24]  scope=mc23_13p6TeV
[2026-01-26 19:57:24]  status=None
[2026-01-26 19:57:24]  status_code=0
[2026-01-26 19:57:24]  storage_token=
[2026-01-26 19:57:24]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6982026468/log.48310826._007865.job.log.tgz.1
[2026-01-26 19:57:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/4a/log.48310826._007865.job.log.tgz.1
[2026-01-26 19:57:24]  workdir=None
[2026-01-26 19:57:24] ]
[2026-01-26 19:57:24] 2026-01-27 00:56:20,208 | INFO     | transferring file log.48310826._007865.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6982026468/log.48310826._007865.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 19:57:24] 2026-01-27 00:56:20,208 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6982026468/log.48310826._007865.job.log.tgz.1 /tmp/boinchome/slots/2/log.48310826._007865.job
[2026-01-26 19:57:24] 2026-01-27 00:56:20,353 | INFO     | adding to output.list: log.48310826._007865.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/4a/log.48310826._007865.job.log.tg
[2026-01-26 19:57:24] 2026-01-27 00:56:20,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:57:24] 2026-01-27 00:56:20,354 | INFO     | summary of transferred files:
[2026-01-26 19:57:24] 2026-01-27 00:56:20,354 | INFO     |  -- lfn=log.48310826._007865.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:57:24] 2026-01-27 00:56:20,354 | INFO     | stage-out finished correctly
[2026-01-26 19:57:24] 2026-01-27 00:56:21,206 | INFO     | time since job start (3311s) is within the limit (349056.0s)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,412 | INFO     | monitor loop #218: job 0:6982026468 is in state 'finished'
[2026-01-26 19:57:24] 2026-01-27 00:56:22,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,570 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:57:24] 2026-01-27 00:56:22,831 | INFO     | job 6982026468 has state=finished
[2026-01-26 19:57:24] 2026-01-27 00:56:22,838 | INFO     | preparing for final server update for job 6982026468 in state='finished'
[2026-01-26 19:57:24] 2026-01-27 00:56:22,838 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6982026468/jobReport.json
[2026-01-26 19:57:24] 2026-01-27 00:56:22,839 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-01-26 19:57:24] 2026-01-27 00:56:22,839 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,840 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,840 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:57:24] 2026-01-27 00:56:22,840 | INFO     | job 6982026468 has finished - writing final server update
[2026-01-26 19:57:24] 2026-01-27 00:56:22,840 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,892 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6982026468/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,893 | INFO     | extracted standard info from prmon json
[2026-01-26 19:57:24] 2026-01-27 00:56:22,893 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:57:24] 2026-01-27 00:56:22,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:57:24] 2026-01-27 00:56:22,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:57:24] 2026-01-27 00:56:22,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | sum of square deviations: 32180552.808510672
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | sum of deviations: -1213416945.8297868
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | mean x: 1769473818.06383
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | mean y: 2654910.276595745
[2026-01-26 19:57:24] 2026-01-27 00:56:22,894 | INFO     | intersect: 66723370642.448425
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | chi2: 0.008402405933416087
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | current memory leak: -37.71 B/s (using 47 data points, chi2=0.01)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | could have reported an average CPU frequency of 3799 MHz (5 samples)
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | ..............................
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . Timing measurements:
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . get job = 0 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . initial setup = 10 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . payload setup = 12 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . stage-in = 0 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . payload execution = 3277 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . stage-out = 2 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | . log creation = 0 s
[2026-01-26 19:57:24] 2026-01-27 00:56:22,895 | INFO     | ..............................
[2026-01-26 19:57:24] 2026-01-27 00:56:23,214 | INFO     | 
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | job summary report
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | --------------------------------------------------
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | PanDA job id: 6982026468
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | task id: 48310826
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | errors: (none)
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | pilot state: finished 
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | transexitcode: 0
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | exeerrorcode: 0
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | exeerrordiag: 
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | exitcode: 0
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | exitmsg: OK
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | cpuconsumptiontime: 20730 s
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | nevents: 400
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | neventsw: 0
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | pid: 1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | pgrp: 1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | corecount: 11
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | event service: False
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | sizes: {0: 2284241, 11: 2284241, 3294: 2309845, 3295: 2309844, 3299: 2318898, 3301: 2319308}
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | --------------------------------------------------
[2026-01-26 19:57:24] 2026-01-27 00:56:23,215 | INFO     | 
[2026-01-26 19:57:24] 2026-01-27 00:56:23,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 19:57:24] 2026-01-27 00:56:23,226 | INFO     | time since job start (3313s) is within the limit (349056.0s)
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,481 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:57:24] 2026-01-27 00:56:23,482 | INFO     | job 6982026468 has completed (purged errors)
[2026-01-26 19:57:24] 2026-01-27 00:56:23,482 | INFO     | overall cleanup function is called
[2026-01-26 19:57:24] 2026-01-27 00:56:24,489 | INFO     | --- collectZombieJob: --- 10, [1007333]
[2026-01-26 19:57:24] 2026-01-27 00:56:24,490 | INFO     | zombie collector waiting for pid 1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:24,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:57:24] 2026-01-27 00:56:24,490 | INFO     | collected zombie processes
[2026-01-26 19:57:24] 2026-01-27 00:56:24,490 | INFO     | will attempt to kill all subprocesses of pid=1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:25,718 | INFO     | process IDs to be killed: [1007333] (in reverse order)
[2026-01-26 19:57:24] 2026-01-27 00:56:26,403 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:57:24] 2026-01-27 00:56:26,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:57:24] 2026-01-27 00:56:26,532 | INFO     | did not find any defunct processes belonging to 1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:26,657 | INFO     | did not find any defunct processes belonging to 1007333
[2026-01-26 19:57:24] 2026-01-27 00:56:26,673 | INFO     | ready for new job
[2026-01-26 19:57:24] 2026-01-27 00:56:26,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:57:24] 2026-01-27 00:56:26,675 | INFO     | **************************************
[2026-01-26 19:57:24] 2026-01-27 00:56:26,675 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:57:24] 2026-01-27 00:56:26,675 | INFO     | **************************************
[2026-01-26 19:57:24] 2026-01-27 00:56:26,675 | INFO     | 
[2026-01-26 19:57:24] 2026-01-27 00:56:26,696 | INFO     | architecture information:
[2026-01-26 19:57:24] 2026-01-27 00:56:26,705 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:57:24] 2026-01-27 00:56:26,818 | INFO     | cat /etc/os-release:
[2026-01-26 19:57:24] NAME="CentOS Linux"
[2026-01-26 19:57:24] VERSION="7 (Core)"
[2026-01-26 19:57:24] ID="centos"
[2026-01-26 19:57:24] ID_LIKE="rhel fedora"
[2026-01-26 19:57:24] VERSION_ID="7"
[2026-01-26 19:57:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:57:24] ANSI_COLOR="0;31"
[2026-01-26 19:57:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:57:24] HOME_URL="https://www.centos.org/"
[2026-01-26 19:57:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:57:24] 
[2026-01-26 19:57:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:57:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:57:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:57:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:57:24] 
[2026-01-26 19:57:24] 2026-01-27 00:56:26,818 | INFO     | **************************************
[2026-01-26 19:57:24] 2026-01-27 00:56:27,322 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 19:57:24] 2026-01-27 00:56:27,387 | INFO     | sufficient remaining disk space (166956367872 B)
[2026-01-26 19:57:24] 2026-01-27 00:56:27,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:57:24] 2026-01-27 00:56:27,387 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:57:24] 2026-01-27 00:56:27,387 | INFO     | update_server=False
[2026-01-26 19:57:24] 2026-01-27 00:56:27,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:57:24] 2026-01-27 00:56:27,429 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 19:57:24] 2026-01-27 00:56:27,430 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 19:57:24] 2026-01-27 00:56:27,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:57:24] 2026-01-27 00:56:27,430 | INFO     | will abort loop
[2026-01-26 19:57:24] 2026-01-27 00:56:27,499 | INFO     | all data control threads have been joined
[2026-01-26 19:57:24] 2026-01-27 00:56:28,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:57:24] 2026-01-27 00:56:28,393 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,411 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,435 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,467 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,505 | INFO     | [data] control thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,575 | INFO     | all payload control threads have been joined
[2026-01-26 19:57:24] 2026-01-27 00:56:28,695 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:57:24] 2026-01-27 00:56:28,783 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:28,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:57:24] 2026-01-27 00:56:28,986 | INFO     | [job] validate thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:29,094 | INFO     | all job control threads have been joined
[2026-01-26 19:57:24] 2026-01-27 00:56:29,183 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:29,281 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:29,453 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:29,581 | INFO     | [payload] control thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:29,592 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:30,100 | INFO     | [job] control thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:30,722 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:32,871 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:57:24] 2026-01-27 00:56:57,281 | INFO     | PID=988473 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 19:57:24] 2026-01-27 00:56:57,281 | INFO     | .. there are 40 such processes running
[2026-01-26 19:57:24] 2026-01-27 00:56:57,281 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:57:24] 2026-01-27 00:56:57,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:57:24] 2026-01-27 00:56:57,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:57:24] 2026-01-27 00:57:16,044 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:57:24] 2026-01-27 00:57:17,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749266999104)>', '<ExcThread(monitor, started 139748588885760)>']
[2026-01-26 19:57:24] 2026-01-27 00:57:18,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:57:24] 2026-01-27 00:57:18,412 | INFO     | [monitor] control thread has ended
[2026-01-26 19:57:24] 2026-01-27 00:57:22,786 | INFO     | all workflow threads have been joined
[2026-01-26 19:57:24] 2026-01-27 00:57:22,787 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:57:24] 2026-01-27 00:57:22,787 | INFO     | traces error code: 0
[2026-01-26 19:57:24] 2026-01-27 00:57:22,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:57:24] 2026-01-27 00:57:23,071 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:57:24] 2026-01-27 00:57:23,102 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:57:24] 2026-01-27 00:57:23,124 [wrapper] pilotpid: 988473
[2026-01-26 19:57:24] 2026-01-27 00:57:23,137 [wrapper] Pilot exit status: 0
[2026-01-26 19:57:24] 2026-01-27 00:57:23,273 [wrapper] pandaids: 6982026468
[2026-01-26 19:57:24] 2026-01-27 00:57:23,956 [wrapper] cleanup supervisor_pilot 1572999 988474
[2026-01-26 19:57:24] 2026-01-27 00:57:23,981 [wrapper] Test setup, not cleaning
[2026-01-26 19:57:24] 2026-01-27 00:57:24,023 [wrapper] apfmon messages muted
[2026-01-26 19:57:24] 2026-01-27 00:57:24,043 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:57:24] 2026-01-27 00:57:24,061 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:57:24]  *** Error codes and diagnostics ***
[2026-01-26 19:57:24]     "exeErrorCode": 0,
[2026-01-26 19:57:24]     "exeErrorDiag": "",
[2026-01-26 19:57:24]     "pilotErrorCode": 0,
[2026-01-26 19:57:24]     "pilotErrorDiag": "",
[2026-01-26 19:57:24]  *** Listing of results directory ***
[2026-01-26 19:57:24] total 674480
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 21:18 pilot3.tar.gz
[2026-01-26 19:57:24] -rwx------. 1 boincer umatlas     36322 Jan 24 21:22 runpilot2-wrapper.sh
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 21:26 queuedata.json
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas       100 Jan 26 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:57:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 19:00 run_atlas
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas       105 Jan 26 19:00 job.xml
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas 503483363 Jan 26 19:00 EVNT.48310824._000077.pool.root.1
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 19:00 start_atlas.sh
[2026-01-26 19:57:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 19:00 shared
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas    597759 Jan 26 19:00 input.tar.gz
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas         0 Jan 26 19:00 boinc_lockfile
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas      2523 Jan 26 19:00 pandaJob.out
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas        57 Jan 26 19:00 setup.sh.local
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas   1006441 Jan 26 19:01 agis_schedconf.cvmfs.json
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas   1516246 Jan 26 19:01 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas       429 Jan 26 19:01 workernode_map.json
[2026-01-26 19:57:24] drwx------. 5 boincer umatlas      4096 Jan 26 19:01 pilot3
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas 181617454 Jan 26 19:55 HITS.48310826._007865.pool.root.1
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas       530 Jan 26 19:55 boinc_task_state.xml
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas        95 Jan 26 19:56 pilot_heartbeat.json
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas      1047 Jan 26 19:56 memory_monitor_summary.json
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas    338774 Jan 26 19:56 log.48310826._007865.job.log.tgz.1
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas      6352 Jan 26 19:56 heartbeat.json
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas      7172 Jan 26 19:56 init_data.xml
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 19:57 boinc_mmap_file
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas        27 Jan 26 19:57 wrapper_checkpoint.txt
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas      5006 Jan 26 19:57 pilotlog.txt
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas    469447 Jan 26 19:57 log.48310826._007865.job.log.1
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas       357 Jan 26 19:57 output.list
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas       620 Jan 26 19:57 runtime_log
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas    829440 Jan 26 19:57 result.tar.gz
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas      9333 Jan 26 19:57 runtime_log.err
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas       655 Jan 26 19:57 hqGNDmyw438nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtY6KDmxPXuBo.diag
[2026-01-26 19:57:24] -rw-r--r--. 1 boincer umatlas     21392 Jan 26 19:57 stderr.txt
[2026-01-26 19:57:24] HITS file was successfully produced:
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas 181617454 Jan 26 19:55 shared/HITS.pool.root.1
[2026-01-26 19:57:24]  *** Contents of shared directory: ***
[2026-01-26 19:57:24] total 670468
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas 503483363 Jan 26 19:00 ATLAS.root_0
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 19:00 start_atlas.sh
[2026-01-26 19:57:24] -rw-r--r--. 2 boincer umatlas    597759 Jan 26 19:00 input.tar.gz
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas 181617454 Jan 26 19:55 HITS.pool.root.1
[2026-01-26 19:57:24] -rw-------. 1 boincer umatlas    829440 Jan 26 19:57 result.tar.gz
19:57:26 (977680): run_atlas exited; CPU time 20811.187609
19:57:26 (977680): called boinc_finish(0)

</stderr_txt>
]]>

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