Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:29 (31249): wrapper (7.7.26015): starting
18:51:29 (31249): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:51:29] Arguments: --nthreads 12
[2026-01-26 18:51:29] Threads: 12
[2026-01-26 18:51:29] Checking for CVMFS
[2026-01-26 18:51:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:51:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:51:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:51:30] 2.11.2.0 2910 127425 97796 155566 1 52 20267516 20275200 1 130560 0 37765163 99.957 5312669 29955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 18:51:30] CVMFS is ok
[2026-01-26 18:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:51:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:51:30] Further information can be found at the LHC@home message board.
[2026-01-26 18:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:51:30] Checking for apptainer binary...
[2026-01-26 18:51:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:51:30] Running /usr/bin/apptainer --version
[2026-01-26 18:51:30] apptainer version 1.3.2-1.el7
[2026-01-26 18:51:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:51:31] c-205-11.aglt2.org
[2026-01-26 18:51:31] apptainer works
[2026-01-26 18:51:31] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:51:31] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:51:31] Starting ATLAS job with PandaID=6983062615
[2026-01-26 18:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:02:04]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:02:04]  filesize=421717
[2026-01-26 20:02:04]  filetype=log
[2026-01-26 20:02:04]  guid=6a782860-24aa-4988-9985-69f91fbd9519
[2026-01-26 20:02:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 20:02:04]  is_altstaged=None
[2026-01-26 20:02:04]  is_tar=False
[2026-01-26 20:02:04]  lfn=log.48310724._010304.job.log.tgz.1
[2026-01-26 20:02:04]  mtime=0
[2026-01-26 20:02:04]  protocol_id=None
[2026-01-26 20:02:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 20:02:04]  replicas=None
[2026-01-26 20:02:04]  scope=mc23_13p6TeV
[2026-01-26 20:02:04]  status=None
[2026-01-26 20:02:04]  status_code=0
[2026-01-26 20:02:04]  storage_token=
[2026-01-26 20:02:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983062615/log.48310724._010304.job.log.tgz.1
[2026-01-26 20:02:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/27/log.48310724._010304.job.log.tgz.1
[2026-01-26 20:02:04]  workdir=None
[2026-01-26 20:02:04] ]
[2026-01-26 20:02:04] 2026-01-27 01:01:22,702 | INFO     | transferring file log.48310724._010304.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983062615/log.48310724._010304.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 20:02:04] 2026-01-27 01:01:22,702 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983062615/log.48310724._010304.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310724._010304.job
[2026-01-26 20:02:04] 2026-01-27 01:01:22,724 | INFO     | adding to output.list: log.48310724._010304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/27/log.48310724._010304.job.log.tg
[2026-01-26 20:02:04] 2026-01-27 01:01:22,725 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 20:02:04] 2026-01-27 01:01:22,725 | INFO     | summary of transferred files:
[2026-01-26 20:02:04] 2026-01-27 01:01:22,725 | INFO     |  -- lfn=log.48310724._010304.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 20:02:04] 2026-01-27 01:01:22,726 | INFO     | stage-out finished correctly
[2026-01-26 20:02:04] 2026-01-27 01:01:24,058 | INFO     | time since job start (4173s) is within the limit (349056.0s)
[2026-01-26 20:02:04] 2026-01-27 01:01:24,814 | WARNING  | process 7110 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:02:04] 2026-01-27 01:01:24,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983062615/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:02:04] 2026-01-27 01:01:24,902 | INFO     | number of running child processes to parent process 7110: 1
[2026-01-26 20:02:04] 2026-01-27 01:01:24,903 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:02:04] 2026-01-27 01:01:25,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 20:02:04] 2026-01-27 01:01:25,623 | INFO     | job 6983062615 has state=finished
[2026-01-26 20:02:04] 2026-01-27 01:01:25,623 | INFO     | preparing for final server update for job 6983062615 in state='finished'
[2026-01-26 20:02:04] 2026-01-27 01:01:25,623 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983062615/jobReport.json
[2026-01-26 20:02:04] 2026-01-27 01:01:25,626 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 20:02:04] 2026-01-27 01:01:25,626 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,627 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,627 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:02:04] 2026-01-27 01:01:25,627 | INFO     | job 6983062615 has finished - writing final server update
[2026-01-26 20:02:04] 2026-01-27 01:01:25,627 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,629 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983062615/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,629 | INFO     | extracted standard info from prmon json
[2026-01-26 20:02:04] 2026-01-27 01:01:25,629 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:02:04] 2026-01-27 01:01:25,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:02:04] 2026-01-27 01:01:25,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:02:04] 2026-01-27 01:01:25,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:02:04] 2026-01-27 01:01:25,631 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:02:04] 2026-01-27 01:01:25,631 | INFO     | sum of square deviations: 70364110.0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,631 | INFO     | sum of deviations: -6164575575.999998
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | mean x: 1769473671.0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | mean y: 2774390.6721311477
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | intersect: 155025756627.23642
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | chi2: 0.05067447706125359
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | current memory leak: -87.61 B/s (using 61 data points, chi2=0.05)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,632 | INFO     | could have reported an average CPU frequency of 1806 MHz (6 samples)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | ..............................
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . Timing measurements:
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . get job = 0 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . initial setup = 7 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . payload setup = 7 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . stage-in = 0 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . payload execution = 4147 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . stage-out = 0 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | . log creation = 0 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,633 | INFO     | ..............................
[2026-01-26 20:02:04] 2026-01-27 01:01:25,710 | INFO     | 
[2026-01-26 20:02:04] 2026-01-27 01:01:25,710 | INFO     | job summary report
[2026-01-26 20:02:04] 2026-01-27 01:01:25,710 | INFO     | --------------------------------------------------
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | PanDA job id: 6983062615
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | task id: 48310724
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | errors: (none)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | pilot state: finished 
[2026-01-26 20:02:04] 2026-01-27 01:01:25,711 | INFO     | transexitcode: 0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | exeerrorcode: 0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | exeerrordiag: 
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | exitcode: 0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | exitmsg: OK
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | cpuconsumptiontime: 44067 s
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | nevents: 400
[2026-01-26 20:02:04] 2026-01-27 01:01:25,712 | INFO     | neventsw: 0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | pid: 7110
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | pgrp: 7110
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | corecount: 12
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | event service: False
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | sizes: {0: 2283768, 1: 2284285, 12: 2284285, 4158: 2310102, 4159: 2319100, 4162: 2319478}
[2026-01-26 20:02:04] 2026-01-27 01:01:25,713 | INFO     | --------------------------------------------------
[2026-01-26 20:02:04] 2026-01-27 01:01:25,714 | INFO     | 
[2026-01-26 20:02:04] 2026-01-27 01:01:25,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 20:02:04] 2026-01-27 01:01:25,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,738 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:02:04] 2026-01-27 01:01:25,741 | INFO     | job 6983062615 has completed (purged errors)
[2026-01-26 20:02:04] 2026-01-27 01:01:25,742 | INFO     | overall cleanup function is called
[2026-01-26 20:02:04] 2026-01-27 01:01:26,750 | INFO     | --- collectZombieJob: --- 10, [7110]
[2026-01-26 20:02:04] 2026-01-27 01:01:26,750 | INFO     | zombie collector waiting for pid 7110
[2026-01-26 20:02:04] 2026-01-27 01:01:26,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:02:04] 2026-01-27 01:01:26,751 | INFO     | collected zombie processes
[2026-01-26 20:02:04] 2026-01-27 01:01:26,751 | INFO     | will attempt to kill all subprocesses of pid=7110
[2026-01-26 20:02:04] 2026-01-27 01:01:26,844 | INFO     | process IDs to be killed: [7110] (in reverse order)
[2026-01-26 20:02:04] 2026-01-27 01:01:26,900 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:02:04] 2026-01-27 01:01:26,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:02:04] 2026-01-27 01:01:26,905 | INFO     | did not find any defunct processes belonging to 7110
[2026-01-26 20:02:04] 2026-01-27 01:01:26,908 | INFO     | did not find any defunct processes belonging to 7110
[2026-01-26 20:02:04] 2026-01-27 01:01:26,908 | INFO     | ready for new job
[2026-01-26 20:02:04] 2026-01-27 01:01:26,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:02:04] 2026-01-27 01:01:26,909 | INFO     | **************************************
[2026-01-26 20:02:04] 2026-01-27 01:01:26,909 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:02:04] 2026-01-27 01:01:26,909 | INFO     | **************************************
[2026-01-26 20:02:04] 2026-01-27 01:01:26,909 | INFO     | 
[2026-01-26 20:02:04] 2026-01-27 01:01:26,910 | INFO     | architecture information:
[2026-01-26 20:02:04] 2026-01-27 01:01:26,911 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:02:04] 2026-01-27 01:01:26,927 | INFO     | cat /etc/os-release:
[2026-01-26 20:02:04] NAME="CentOS Linux"
[2026-01-26 20:02:04] VERSION="7 (Core)"
[2026-01-26 20:02:04] ID="centos"
[2026-01-26 20:02:04] ID_LIKE="rhel fedora"
[2026-01-26 20:02:04] VERSION_ID="7"
[2026-01-26 20:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:02:04] ANSI_COLOR="0;31"
[2026-01-26 20:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:02:04] HOME_URL="https://www.centos.org/"
[2026-01-26 20:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:02:04] 
[2026-01-26 20:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:02:04] 
[2026-01-26 20:02:04] 2026-01-27 01:01:26,927 | INFO     | **************************************
[2026-01-26 20:02:04] 2026-01-27 01:01:27,430 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 20:02:04] 2026-01-27 01:01:27,447 | INFO     | sufficient remaining disk space (28846325760 B)
[2026-01-26 20:02:04] 2026-01-27 01:01:27,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:02:04] 2026-01-27 01:01:27,448 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:02:04] 2026-01-27 01:01:27,448 | INFO     | update_server=False
[2026-01-26 20:02:04] 2026-01-27 01:01:27,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:02:04] 2026-01-27 01:01:27,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:02:04] 2026-01-27 01:01:27,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:02:04] 2026-01-27 01:01:27,684 | INFO     | all payload control threads have been joined
[2026-01-26 20:02:04] 2026-01-27 01:01:27,781 | INFO     | all data control threads have been joined
[2026-01-26 20:02:04] 2026-01-27 01:01:28,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:02:04] 2026-01-27 01:01:28,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:02:04] 2026-01-27 01:01:28,410 | INFO     | aborting loop
[2026-01-26 20:02:04] 2026-01-27 01:01:28,453 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,455 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,685 | INFO     | [payload] control thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,787 | INFO     | [data] control thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,841 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,841 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:28,906 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,076 | INFO     | all job control threads have been joined
[2026-01-26 20:02:04] 2026-01-27 01:01:29,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,391 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,416 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,792 | INFO     | [job] validate thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,845 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:29,867 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:30,082 | INFO     | [job] control thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:30,322 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:31,455 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:02:04] 2026-01-27 01:01:57,249 | INFO     | PID=2639 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 20:02:04] 2026-01-27 01:01:57,250 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:02:04] 2026-01-27 01:01:57,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:02:04] 2026-01-27 01:01:57,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:02:04] 2026-01-27 01:01:57,855 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:02:04] 2026-01-27 01:01:58,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463378061120)>', '<ExcThread(monitor, started 140462123898624)>']
[2026-01-26 20:02:04] 2026-01-27 01:01:59,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:02:04] 2026-01-27 01:01:59,261 | INFO     | [monitor] control thread has ended
[2026-01-26 20:02:04] 2026-01-27 01:02:03,810 | INFO     | all workflow threads have been joined
[2026-01-26 20:02:04] 2026-01-27 01:02:03,810 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:02:04] 2026-01-27 01:02:03,811 | INFO     | traces error code: 0
[2026-01-26 20:02:04] 2026-01-27 01:02:03,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:02:04] 2026-01-27 01:02:03,892 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:02:04] 2026-01-27 01:02:03,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:02:04] 2026-01-27 01:02:03,899 [wrapper] pilotpid: 2639
[2026-01-26 20:02:04] 2026-01-27 01:02:03,903 [wrapper] Pilot exit status: 0
[2026-01-26 20:02:04] 2026-01-27 01:02:03,919 [wrapper] pandaids: 6983062615
[2026-01-26 20:02:04] 2026-01-27 01:02:03,959 [wrapper] cleanup supervisor_pilot 24845 2640
[2026-01-26 20:02:04] 2026-01-27 01:02:03,963 [wrapper] Test setup, not cleaning
[2026-01-26 20:02:04] 2026-01-27 01:02:03,967 [wrapper] apfmon messages muted
[2026-01-26 20:02:04] 2026-01-27 01:02:03,972 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:02:04] 2026-01-27 01:02:03,976 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:02:04]  *** Error codes and diagnostics ***
[2026-01-26 20:02:04]     "exeErrorCode": 0,
[2026-01-26 20:02:04]     "exeErrorDiag": "",
[2026-01-26 20:02:04]     "pilotErrorCode": 0,
[2026-01-26 20:02:04]     "pilotErrorDiag": "",
[2026-01-26 20:02:04]  *** Listing of results directory ***
[2026-01-26 20:02:04] total 663776
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-26 20:02:04] -rwx------ 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas       100 Jan 26 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:02:04] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 18:51 run_atlas
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas       105 Jan 26 18:51 job.xml
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas 493809447 Jan 26 18:51 EVNT.48310721._000206.pool.root.1
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:51 start_atlas.sh
[2026-01-26 20:02:04] drwxrwx--x 2 boincer umatlas      4096 Jan 26 18:51 shared
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas    597759 Jan 26 18:51 input.tar.gz
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas         0 Jan 26 18:51 boinc_lockfile
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas      2536 Jan 26 18:51 pandaJob.out
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas   1006441 Jan 26 18:51 agis_schedconf.cvmfs.json
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas   1516246 Jan 26 18:51 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas       445 Jan 26 18:51 workernode_map.json
[2026-01-26 20:02:04] drwx------ 5 boincer umatlas      4096 Jan 26 18:51 pilot3
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas      5868 Jan 26 19:58 init_data.xml
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas 179894896 Jan 26 20:00 HITS.48310724._010304.pool.root.1
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas       530 Jan 26 20:01 boinc_task_state.xml
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas      1043 Jan 26 20:01 memory_monitor_summary.json
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas    421717 Jan 26 20:01 log.48310724._010304.job.log.tgz.1
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas      6420 Jan 26 20:01 heartbeat.json
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 20:01 boinc_mmap_file
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas        27 Jan 26 20:01 wrapper_checkpoint.txt
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas        95 Jan 26 20:01 pilot_heartbeat.json
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas      4741 Jan 26 20:02 pilotlog.txt
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas    610443 Jan 26 20:02 log.48310724._010304.job.log.1
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas       357 Jan 26 20:02 output.list
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas       620 Jan 26 20:02 runtime_log
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas   1054720 Jan 26 20:02 result.tar.gz
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas       659 Jan 26 20:02 yGGODm49H48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYG1KDmdoYDyn.diag
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas      8818 Jan 26 20:02 runtime_log.err
[2026-01-26 20:02:04] -rw-r--r-- 1 boincer umatlas     21215 Jan 26 20:02 stderr.txt
[2026-01-26 20:02:04] HITS file was successfully produced:
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas 179894896 Jan 26 20:00 shared/HITS.pool.root.1
[2026-01-26 20:02:04]  *** Contents of shared directory: ***
[2026-01-26 20:02:04] total 659548
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas 493809447 Jan 26 18:51 ATLAS.root_0
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:51 start_atlas.sh
[2026-01-26 20:02:04] -rw-r--r-- 2 boincer umatlas    597759 Jan 26 18:51 input.tar.gz
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas 179894896 Jan 26 20:00 HITS.pool.root.1
[2026-01-26 20:02:04] -rw------- 1 boincer umatlas   1054720 Jan 26 20:02 result.tar.gz
20:02:05 (31249): run_atlas exited; CPU time 44047.282012
20:02:05 (31249): called boinc_finish(0)

</stderr_txt>
]]>

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