Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-31 05:46:43 (12240): vboxwrapper version 26210
2026-01-31 05:46:43 (12240): BOINC client version: 7.16.5
2026-01-31 05:46:44 (12240): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-01-31 05:46:44 (12240): Successfully copied 'init_data.xml' to the shared directory.
2026-01-31 05:46:45 (12240): Create VM. (boinc_7a95ae5827b7e564, slot#2)
2026-01-31 05:46:45 (12240): Setting Memory Size for VM. (4400MB)
2026-01-31 05:46:45 (12240): Setting CPU Count for VM. (5)
2026-01-31 05:46:46 (12240): Setting Chipset Options for VM.
2026-01-31 05:46:46 (12240): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-31 05:46:46 (12240): Setting Boot Options for VM.
2026-01-31 05:46:47 (12240): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-31 05:46:47 (12240): Enabling VM Network Access.
2026-01-31 05:46:47 (12240): Disabling USB Support for VM.
2026-01-31 05:46:47 (12240): Disabling COM Port Support for VM.
2026-01-31 05:46:48 (12240): Disabling LPT Port Support for VM.
2026-01-31 05:46:48 (12240): Disabling Audio Support for VM.
2026-01-31 05:46:48 (12240): Disabling Clipboard Support for VM.
2026-01-31 05:46:48 (12240): Disabling Drag and Drop Support for VM.
2026-01-31 05:46:49 (12240): Adding storage controller(s) to VM.
2026-01-31 05:46:49 (12240): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-31 05:46:49 (12240): Adding VirtualBox Guest Additions to VM.
2026-01-31 05:46:50 (12240): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-31 05:46:50 (12240): forwarding host port 57111 to guest port 80
2026-01-31 05:46:50 (12240): Enabling remote desktop for VM.
2026-01-31 05:46:51 (12240): Enabling shared directory for VM.
2026-01-31 05:46:51 (12240): Starting VM using VBoxManage interface. (boinc_7a95ae5827b7e564, slot#2)
2026-01-31 05:46:55 (12240): Successfully started VM. (PID = '16716')
2026-01-31 05:46:55 (12240): Reporting VM Process ID to BOINC.
2026-01-31 05:46:55 (12240): Guest Log: BIOS: VirtualBox 5.2.44
2026-01-31 05:46:55 (12240): Guest Log: CPUID EDX: 0x178bfbff
2026-01-31 05:46:55 (12240): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-31 05:46:55 (12240): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-31 05:46:55 (12240): Detected: Web Application Enabled (http://localhost:57111)
2026-01-31 05:46:55 (12240): Detected: Remote Desktop Enabled (localhost:57112)
2026-01-31 05:46:55 (12240): Preference change detected
2026-01-31 05:46:55 (12240): Setting CPU throttle for VM. (100%)
2026-01-31 05:46:56 (12240): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-31 05:46:57 (12240): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-31 05:46:57 (12240): Guest Log: BIOS: Booting from Hard Disk...
2026-01-31 05:47:00 (12240): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-31 05:47:00 (12240): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-31 05:47:00 (12240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-31 05:47:06 (12240): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-31 05:47:06 (12240): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-31 05:47:12 (12240): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000180 main     Log opened 2026-01-31T05:47:10.299714000Z
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000298 main     OS Product: Linux
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000332 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000359 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000384 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000385 main     Process ID: 1319
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.000386 main     Package type: LINUX_64BITS_GENERIC
2026-01-31 05:47:12 (12240): Guest Log: 00:00:00.001305 main     5.2.32 r132073 started. Verbose level = 0
2026-01-31 05:47:12 (12240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-31 05:47:12 (12240): Guest Log: [INFO] Mounting shared directory
2026-01-31 05:47:12 (12240): Guest Log: [INFO] Checking for init_data.xml
2026-01-31 05:47:17 (12240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-31 05:47:17 (12240): Guest Log: [INFO] Detected branch: prod
2026-01-31 05:47:17 (12240): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-31 05:47:17 (12240): Guest Log: Copying input files
2026-01-31 05:47:19 (12240): Guest Log: Copied input files into RunAtlas.
2026-01-31 05:47:19 (12240): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-31 05:47:19 (12240): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-31 05:47:19 (12240): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-31 05:47:19 (12240): Guest Log: Further information can be found at the LHC@home message board.
2026-01-31 05:47:22 (12240): Guest Log: 00:00:10.011290 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 158 779 000ns (GuestNow=1 769 831 242 143 504 000 ns GuestLast=1 769 838 430 302 283 000 ns fSetTimeLastLoop=true )
2026-01-31 05:47:27 (12240): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-31 05:47:27 (12240): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-31 05:47:27 (12240): Guest Log: 2.6.3.0 1594 0 30168 155700 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-31 05:47:29 (12240): Guest Log: copied the webapp to /var/www
2026-01-31 05:47:29 (12240): Guest Log: ATHENA_PROC_NUMBER=5
2026-01-31 05:47:29 (12240): Guest Log: ATHENA_CORE_NUMBER=5
2026-01-31 05:47:29 (12240): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-31 05:47:29 (12240): Guest Log:  *** Starting ATLAS job. (PandaID=6984042379 taskID=47929392) ***
2026-01-31 07:26:58 (12240): Status Report: Elapsed Time: '6000.000000'
2026-01-31 07:26:58 (12240): Status Report: CPU Time: '27416.390625'
2026-01-31 08:37:39 (12240): Guest Log:  *** Job finished ***
2026-01-31 08:37:39 (12240): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,379 | INFO     | PID=6007 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,380 | INFO     | found 0 job(s) in 20 queues
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:33,381 | INFO     | [monitor] control thread has ended
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,602 | INFO     | all workflow threads have been joined
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,603 | INFO     | end of generic workflow (traces error code: 0)
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,603 | INFO     | traces error code: 0
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,710 [wrapper] ==== pilot stdout END ====
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,715 [wrapper] ==== wrapper stdout RESUME ====
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,719 [wrapper] pilotpid: 6007
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,724 [wrapper] Pilot exit status: 0
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,772 [wrapper] pandaids: 6984042379
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,799 [wrapper] cleanup supervisor_pilot 26732 6008
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,805 [wrapper] Test setup, not cleaning
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,810 [wrapper] apfmon messages muted
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,814 [wrapper] ==== wrapper stdout END ====
2026-01-31 08:37:39 (12240): Guest Log: 2026-01-31 06:37:37,819 [wrapper] ==== wrapper stderr END ====
2026-01-31 08:37:39 (12240): Guest Log:  *** Error codes and diagnostics ***
2026-01-31 08:37:39 (12240): Guest Log:     "exeErrorCode": 0,
2026-01-31 08:37:39 (12240): Guest Log:     "exeErrorDiag": "",
2026-01-31 08:37:39 (12240): Guest Log:     "pilotErrorCode": 0,
2026-01-31 08:37:39 (12240): Guest Log:     "pilotErrorDiag": "",
2026-01-31 08:37:39 (12240): Guest Log:  *** Listing of results directory ***
2026-01-31 08:37:39 (12240): Guest Log: total 185588
2026-01-31 08:37:39 (12240): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 26 05:14 queuedata.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 26 05:14 pilot3.tar.gz
2026-01-31 08:37:39 (12240): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 26 05:14 runpilot2-wrapper.sh
2026-01-31 08:37:39 (12240): Guest Log: -rwxr-xr-x. 1 atlas atlas      9178 Jan 31 03:47 init_data.xml
2026-01-31 08:37:39 (12240): Guest Log: -rwxr-xr-x. 1 atlas atlas    597755 Jan 31 03:47 input.tar.gz
2026-01-31 08:37:39 (12240): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 31 03:47 start_atlas.sh
2026-01-31 08:37:39 (12240): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 31 03:47 EVNT.47929390._000193.pool.root.1 -> /data/./ATLAS.root_0
2026-01-31 08:37:39 (12240): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Jan 31 03:47 pandaJob.out
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas   1010528 Jan 31 03:48 agis_schedconf.cvmfs.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas   1511668 Jan 31 03:48 agis_ddmendpoints.agis.ALL.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas       438 Jan 31 03:48 workernode_map.json
2026-01-31 08:37:39 (12240): Guest Log: drwx------. 5 atlas atlas      4096 Jan 31 03:48 pilot3
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas 182648943 Jan 31 06:36 HITS.47929392._005080.pool.root.1
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 31 06:36 memory_monitor_summary.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas    339965 Jan 31 06:36 log.47929392._005080.job.log.tgz.1
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas      6394 Jan 31 06:37 heartbeat.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas        95 Jan 31 06:37 pilot_heartbeat.json
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas      5059 Jan 31 06:37 pilotlog.txt
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas   1420089 Jan 31 06:37 log.47929392._005080.job.log.1
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas       357 Jan 31 06:37 output.list
2026-01-31 08:37:39 (12240): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 31 06:37 runtime_log
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas   1781760 Jan 31 06:37 result.tar.gz
2026-01-31 08:37:39 (12240): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Jan 31 06:37 runtime_log.err
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas       669 Jan 31 06:37 46iKDmy6T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhU2KDmTSQm1n.diag
2026-01-31 08:37:39 (12240): Guest Log: Looking for outputfile HITS.47929392._005080.pool.root.1
2026-01-31 08:37:39 (12240): Guest Log: HITS file was successfully produced
2026-01-31 08:37:39 (12240): Guest Log: -rw-------. 1 atlas atlas 182648943 Jan 31 06:36 /home/atlas/RunAtlas/HITS.47929392._005080.pool.root.1
2026-01-31 08:37:40 (12240): Guest Log: Successfully finished the ATLAS job!
2026-01-31 08:37:40 (12240): Guest Log: Copying the results back to the shared directory!
2026-01-31 08:37:41 (12240): Guest Log:  *** Contents of shared directory: ***
2026-01-31 08:37:41 (12240): Guest Log: total 427936
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root 253143905 Jan 31 03:46 ATLAS.root_0
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root 182648943 Jan 31 06:37 HITS.pool.root.1
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root      9178 Jan 31 03:46 init_data.xml
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root    597755 Jan 26 23:45 input.tar.gz
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root   1781760 Jan 31 06:37 result.tar.gz
2026-01-31 08:37:41 (12240): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 23:45 start_atlas.sh
2026-01-31 08:37:41 (12240): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-31 08:37:41 (12240): VM Completion File Detected.
2026-01-31 08:37:41 (12240): Powering off VM.
2026-01-31 08:37:41 (12240): Successfully stopped VM.
2026-01-31 08:37:41 (12240): Deregistering VM. (boinc_7a95ae5827b7e564, slot#2)
2026-01-31 08:37:41 (12240): Removing network bandwidth throttle group from VM.
2026-01-31 08:37:42 (12240): Removing VM from VirtualBox.
2026-01-31 08:37:47 (12240): called boinc_finish(0)

</stderr_txt>
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