Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:02 (11923): wrapper (7.7.26015): starting
08:33:02 (11923): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 08:33:02] Arguments: --nthreads 8
[2026-01-27 08:33:02] Threads: 8
[2026-01-27 08:33:02] Checking for CVMFS
[2026-01-27 08:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 08:33:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 08:33:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 08:33:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 08:33:06] 2.11.2.0 28804 41279 104196 155577 3 93 24867394 25165824 1088 130560 0 7068299 99.825 5245216 2607 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 08:33:06] CVMFS is ok
[2026-01-27 08:33:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 08:33:06] Checking for apptainer binary...
[2026-01-27 08:33:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 08:33:06] Running /usr/bin/apptainer --version
[2026-01-27 08:33:06] apptainer version 1.3.2-1.el7
[2026-01-27 08:33:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 08:33:23] cg-vwn362.simple-grid.lan
[2026-01-27 08:33:23] apptainer works
[2026-01-27 08:33:23] Set ATHENA_PROC_NUMBER=8
[2026-01-27 08:33:23] Set ATHENA_CORE_NUMBER=8
[2026-01-27 08:33:23] Starting ATLAS job with PandaID=6983773647
[2026-01-27 08:33:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:09:42]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:09:42] 2026-01-27 12:09:04,577 | INFO     | extracted standard info from prmon json
[2026-01-27 13:09:42] 2026-01-27 12:09:04,578 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:09:42] 2026-01-27 12:09:04,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:09:42] 2026-01-27 12:09:04,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:09:42] 2026-01-27 12:09:04,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:09:42] 2026-01-27 12:09:04,583 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:09:42] 2026-01-27 12:09:04,587 | INFO     | sum of square deviations: 5513070810.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,590 | INFO     | sum of deviations: 111567912370.00003
[2026-01-27 13:09:42] 2026-01-27 12:09:04,590 | INFO     | mean x: 1769507797.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,590 | INFO     | mean y: 2420853.367816092
[2026-01-27 13:09:42] 2026-01-27 12:09:04,590 | INFO     | intersect: -35807075820.54264
[2026-01-27 13:09:42] 2026-01-27 12:09:04,591 | INFO     | chi2: 9.468595914104947
[2026-01-27 13:09:42] 2026-01-27 12:09:04,591 | INFO     | sum of square deviations: 5202255680.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,594 | INFO     | sum of deviations: 144516495954.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,594 | INFO     | mean x: 1769507644.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,594 | INFO     | mean y: 2436818.33203125
[2026-01-27 13:09:42] 2026-01-27 12:09:04,594 | INFO     | intersect: -49153748513.15115
[2026-01-27 13:09:42] 2026-01-27 12:09:04,595 | INFO     | chi2: 7.964042323239534
[2026-01-27 13:09:42] 2026-01-27 12:09:04,595 | INFO     | current chi2=7.964042323239534 (change=15.88993346546922 %)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,595 | INFO     | right removable region: 255
[2026-01-27 13:09:42] 2026-01-27 12:09:04,596 | INFO     | sum of square deviations: 5202255680.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,598 | INFO     | sum of deviations: 20670740081.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,598 | INFO     | mean x: 1769507949.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,598 | INFO     | mean y: 2465427.32421875
[2026-01-27 13:09:42] 2026-01-27 12:09:04,598 | INFO     | intersect: -7028530576.3674965
[2026-01-27 13:09:42] 2026-01-27 12:09:04,599 | INFO     | chi2: 4.442124914944656
[2026-01-27 13:09:42] 2026-01-27 12:09:04,599 | INFO     | current chi2=4.442124914944656 (change=53.08570610424488 %)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,599 | INFO     | sum of square deviations: 4903347750.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,602 | INFO     | sum of deviations: -45755913584.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,602 | INFO     | mean x: 1769508102.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,602 | INFO     | mean y: 2499256.948207171
[2026-01-27 13:09:42] 2026-01-27 12:09:04,602 | INFO     | intersect: 16514781054.889189
[2026-01-27 13:09:42] 2026-01-27 12:09:04,603 | INFO     | chi2: 1.893907244004843
[2026-01-27 13:09:42] 2026-01-27 12:09:04,603 | INFO     | current chi2=1.893907244004843 (change=57.36483596773327 %)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,603 | INFO     | sum of square deviations: 4616114457.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,606 | INFO     | sum of deviations: -52613448946.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,606 | INFO     | mean x: 1769508254.5
[2026-01-27 13:09:42] 2026-01-27 12:09:04,606 | INFO     | mean y: 2502844.288617886
[2026-01-27 13:09:42] 2026-01-27 12:09:04,606 | INFO     | intersect: 20170965534.22097
[2026-01-27 13:09:42] 2026-01-27 12:09:04,606 | INFO     | chi2: 1.8126569803772226
[2026-01-27 13:09:42] 2026-01-27 12:09:04,607 | INFO     | current chi2=1.8126569803772226 (change=4.290086744470612 %)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,607 | INFO     | left removable region: 30
[2026-01-27 13:09:42] 2026-01-27 12:09:04,607 | INFO     | sum of square deviations: 3531973200.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,613 | INFO     | sum of deviations: 5442631364.999999
[2026-01-27 13:09:42] 2026-01-27 12:09:04,613 | INFO     | mean x: 1769508529.0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,614 | INFO     | mean y: 2507005.151111111
[2026-01-27 13:09:42] 2026-01-27 12:09:04,614 | INFO     | intersect: -2724235830.9979315
[2026-01-27 13:09:42] 2026-01-27 12:09:04,614 | INFO     | chi2: 0.024758970212506247
[2026-01-27 13:09:42] 2026-01-27 12:09:04,614 | INFO     | current memory leak: 1.54 B/s (using 225 data points, chi2=0.02)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,615 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,615 | INFO     | ..............................
[2026-01-27 13:09:42] 2026-01-27 12:09:04,615 | INFO     | . Timing measurements:
[2026-01-27 13:09:42] 2026-01-27 12:09:04,615 | INFO     | . get job = 0 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . initial setup = 114 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . payload setup = 130 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . stage-in = 0 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . payload execution = 16002 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . stage-out = 3 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | . log creation = 1 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,616 | INFO     | ..............................
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | 
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | job summary report
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | --------------------------------------------------
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | PanDA job id: 6983773647
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | task id: 48318034
[2026-01-27 13:09:42] 2026-01-27 12:09:04,785 | INFO     | errors: (none)
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | pilot state: finished 
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | transexitcode: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | exeerrorcode: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | exeerrordiag: 
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | exitcode: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | exitmsg: OK
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | cpuconsumptiontime: 57868 s
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | nevents: 400
[2026-01-27 13:09:42] 2026-01-27 12:09:04,786 | INFO     | neventsw: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | pid: 20361
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | pgrp: 20361
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | corecount: 8
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | event service: False
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | sizes: {0: 2284202, 1: 2284230, 16137: 2315526, 16141: 2324524, 16142: 2324580, 16145: 2324774}
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | --------------------------------------------------
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | 
[2026-01-27 13:09:42] 2026-01-27 12:09:04,787 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 13:09:42] 2026-01-27 12:09:04,932 | INFO     | time since job start (16146s) is within the limit (349056.0s)
[2026-01-27 13:09:42] 2026-01-27 12:09:05,413 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,413 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,415 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:09:42] 2026-01-27 12:09:05,416 | INFO     | job 6983773647 has completed (purged errors)
[2026-01-27 13:09:42] 2026-01-27 12:09:05,416 | INFO     | overall cleanup function is called
[2026-01-27 13:09:42] 2026-01-27 12:09:06,435 | INFO     | --- collectZombieJob: --- 10, [20361]
[2026-01-27 13:09:42] 2026-01-27 12:09:06,435 | INFO     | zombie collector waiting for pid 20361
[2026-01-27 13:09:42] 2026-01-27 12:09:06,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:09:42] 2026-01-27 12:09:06,435 | INFO     | collected zombie processes
[2026-01-27 13:09:42] 2026-01-27 12:09:06,435 | INFO     | will attempt to kill all subprocesses of pid=20361
[2026-01-27 13:09:42] 2026-01-27 12:09:06,516 | INFO     | process IDs to be killed: [20361] (in reverse order)
[2026-01-27 13:09:42] 2026-01-27 12:09:07,393 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:09:42] 2026-01-27 12:09:07,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:09:42] 2026-01-27 12:09:07,396 | INFO     | did not find any defunct processes belonging to 20361
[2026-01-27 13:09:42] 2026-01-27 12:09:07,398 | INFO     | did not find any defunct processes belonging to 20361
[2026-01-27 13:09:42] 2026-01-27 12:09:07,398 | INFO     | ready for new job
[2026-01-27 13:09:42] 2026-01-27 12:09:07,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:09:42] 2026-01-27 12:09:07,400 | INFO     | **************************************
[2026-01-27 13:09:42] 2026-01-27 12:09:07,400 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:09:42] 2026-01-27 12:09:07,401 | INFO     | **************************************
[2026-01-27 13:09:42] 2026-01-27 12:09:07,401 | INFO     | 
[2026-01-27 13:09:42] 2026-01-27 12:09:07,401 | INFO     | pilot is running in a VM
[2026-01-27 13:09:42] 2026-01-27 12:09:07,401 | INFO     | architecture information:
[2026-01-27 13:09:42] 2026-01-27 12:09:07,410 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:09:42] 2026-01-27 12:09:07,720 | INFO     | cat /etc/os-release:
[2026-01-27 13:09:42] NAME="CentOS Linux"
[2026-01-27 13:09:42] VERSION="7 (Core)"
[2026-01-27 13:09:42] ID="centos"
[2026-01-27 13:09:42] ID_LIKE="rhel fedora"
[2026-01-27 13:09:42] VERSION_ID="7"
[2026-01-27 13:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:09:42] ANSI_COLOR="0;31"
[2026-01-27 13:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:09:42] HOME_URL="https://www.centos.org/"
[2026-01-27 13:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:09:42] 
[2026-01-27 13:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:09:42] 
[2026-01-27 13:09:42] 2026-01-27 12:09:07,721 | INFO     | **************************************
[2026-01-27 13:09:42] 2026-01-27 12:09:08,224 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 13:09:42] 2026-01-27 12:09:08,395 | INFO     | sufficient remaining disk space (494697185280 B)
[2026-01-27 13:09:42] 2026-01-27 12:09:08,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:09:42] 2026-01-27 12:09:08,396 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:09:42] 2026-01-27 12:09:08,396 | INFO     | update_server=False
[2026-01-27 13:09:42] 2026-01-27 12:09:08,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:09:42] 2026-01-27 12:09:08,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:09:42] 2026-01-27 12:09:08,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 13:09:42] 2026-01-27 12:09:08,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 13:09:42] 2026-01-27 12:09:08,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:09:42] 2026-01-27 12:09:08,540 | INFO     | will abort loop
[2026-01-27 13:09:42] 2026-01-27 12:09:08,598 | INFO     | all payload control threads have been joined
[2026-01-27 13:09:42] 2026-01-27 12:09:08,781 | INFO     | all data control threads have been joined
[2026-01-27 13:09:42] 2026-01-27 12:09:08,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:09:42] 2026-01-27 12:09:09,402 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,530 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,548 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,603 | INFO     | [payload] control thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,651 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,654 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,699 | INFO     | all job control threads have been joined
[2026-01-27 13:09:42] 2026-01-27 12:09:09,787 | INFO     | [data] control thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:09,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:09:42] 2026-01-27 12:09:10,157 | INFO     | [job] validate thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,440 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,594 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,637 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,705 | INFO     | [job] control thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,807 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:10,922 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:12,405 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:09:42] 2026-01-27 12:09:25,740 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:09:42] 2026-01-27 12:09:26,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745974626112)>', '<ExcThread(monitor, started 139745418016512)>']
[2026-01-27 13:09:42] 2026-01-27 12:09:31,441 | INFO     | all workflow threads have been joined
[2026-01-27 13:09:42] 2026-01-27 12:09:31,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:09:42] 2026-01-27 12:09:31,441 | INFO     | traces error code: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:31,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | INFO     | PID=15916 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | INFO     | .. there are 2 such processes running
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:09:42] 2026-01-27 12:09:38,132 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 13:09:42] 2026-01-27 12:09:38,133 | INFO     | [monitor] control thread has ended
[2026-01-27 13:09:42] 2026-01-27 12:09:38,583 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:09:42] 2026-01-27 12:09:38,684 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:09:42] 2026-01-27 12:09:38,819 [wrapper] pilotpid: 15916
[2026-01-27 13:09:42] 2026-01-27 12:09:38,931 [wrapper] Pilot exit status: 0
[2026-01-27 13:09:42] 2026-01-27 12:09:39,404 [wrapper] pandaids: 6983773647
[2026-01-27 13:09:42] 2026-01-27 12:09:40,282 [wrapper] cleanup supervisor_pilot 27615 15917
[2026-01-27 13:09:42] 2026-01-27 12:09:40,346 [wrapper] Test setup, not cleaning
[2026-01-27 13:09:42] 2026-01-27 12:09:40,402 [wrapper] apfmon messages muted
[2026-01-27 13:09:42] 2026-01-27 12:09:40,508 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:09:42] 2026-01-27 12:09:40,632 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:09:42]  *** Error codes and diagnostics ***
[2026-01-27 13:09:42]     "exeErrorCode": 0,
[2026-01-27 13:09:42]     "exeErrorDiag": "",
[2026-01-27 13:09:42]     "pilotErrorCode": 0,
[2026-01-27 13:09:42]     "pilotErrorDiag": "",
[2026-01-27 13:09:42]  *** Listing of results directory ***
[2026-01-27 13:09:42] total 670816
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 13:09:42] -rwx------. 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc      5111 Jan 26 06:22 queuedata.json
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc       100 Jan 27 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:09:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 08:33 run_atlas
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc       105 Jan 27 08:33 job.xml
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc      6391 Jan 27 08:33 init_data.xml
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc 492574550 Jan 27 08:33 EVNT.48318032._000069.pool.root.1
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc     15845 Jan 27 08:33 start_atlas.sh
[2026-01-27 13:09:42] drwxrwx--x. 2 boinc boinc        68 Jan 27 08:33 shared
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc    597765 Jan 27 08:33 input.tar.gz
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc         0 Jan 27 08:33 boinc_lockfile
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc      2534 Jan 27 08:33 pandaJob.out
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc       415 Jan 27 08:39 workernode_map.json
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc   1003573 Jan 27 08:39 agis_schedconf.cvmfs.json
[2026-01-27 13:09:42] drwx------. 5 boinc boinc      4096 Jan 27 08:39 pilot3
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc 184888955 Jan 27 13:07 HITS.48318034._002775.pool.root.1
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc       531 Jan 27 13:07 boinc_task_state.xml
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc        95 Jan 27 13:08 pilot_heartbeat.json
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc      1010 Jan 27 13:08 memory_monitor_summary.json
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc   1516246 Jan 27 13:08 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc    503511 Jan 27 13:09 log.48318034._002775.job.log.tgz.1
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc      6318 Jan 27 13:09 heartbeat.json
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc      8192 Jan 27 13:09 boinc_mmap_file
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc        28 Jan 27 13:09 wrapper_checkpoint.txt
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc       890 Jan 27 13:09 pilotlog.txt
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc   2263167 Jan 27 13:09 log.48318034._002775.job.log.1
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc       357 Jan 27 13:09 output.list
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc       620 Jan 27 13:09 runtime_log
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc   2785280 Jan 27 13:09 result.tar.gz
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc      8816 Jan 27 13:09 runtime_log.err
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc       655 Jan 27 13:09 qe7NDmFAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4g2KDmJhsFPo.diag
[2026-01-27 13:09:42] -rw-r--r--. 1 boinc boinc     20627 Jan 27 13:09 stderr.txt
[2026-01-27 13:09:42] HITS file was successfully produced:
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc 184888955 Jan 27 13:07 shared/HITS.pool.root.1
[2026-01-27 13:09:42]  *** Contents of shared directory: ***
[2026-01-27 13:09:42] total 664908
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc 492574550 Jan 27 08:33 ATLAS.root_0
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc     15845 Jan 27 08:33 start_atlas.sh
[2026-01-27 13:09:42] -rw-r--r--. 2 boinc boinc    597765 Jan 27 08:33 input.tar.gz
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc 184888955 Jan 27 13:07 HITS.pool.root.1
[2026-01-27 13:09:42] -rw-------. 1 boinc boinc   2785280 Jan 27 13:09 result.tar.gz
13:09:44 (11923): run_atlas exited; CPU time 58050.855888
13:09:44 (11923): called boinc_finish(0)

</stderr_txt>
]]>

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