Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:18 (21916): wrapper (7.7.26015): starting
18:43:18 (21916): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:43:18] Arguments: --nthreads 8
[2026-01-26 18:43:18] Threads: 8
[2026-01-26 18:43:18] Checking for CVMFS
[2026-01-26 18:43:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:43:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:43:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:43:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:43:18] 2.11.2.0 2698 161817 90344 155566 0 52 13496655 20275201 1 130560 0 42285118 99.876 8754179 29282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 18:43:18] CVMFS is ok
[2026-01-26 18:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:43:18] Further information can be found at the LHC@home message board.
[2026-01-26 18:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:43:18] Checking for apptainer binary...
[2026-01-26 18:43:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:43:18] Running /usr/bin/apptainer --version
[2026-01-26 18:43:18] apptainer version 1.3.2-1.el7
[2026-01-26 18:43:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:43:20] c-204-2.aglt2.org
[2026-01-26 18:43:20] apptainer works
[2026-01-26 18:43:20] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:43:20] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:43:20] Starting ATLAS job with PandaID=6982527983
[2026-01-26 18:43:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:40:01]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:40:01] 2026-01-27 01:39:17,882 | INFO     | extracted standard info from prmon json
[2026-01-26 20:40:01] 2026-01-27 01:39:17,882 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:40:01] 2026-01-27 01:39:17,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:40:01] 2026-01-27 01:39:17,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:40:01] 2026-01-27 01:39:17,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:40:01] 2026-01-27 01:39:17,885 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:40:01] 2026-01-27 01:39:17,885 | INFO     | sum of square deviations: 459366752.5
[2026-01-26 20:40:01] 2026-01-27 01:39:17,886 | INFO     | sum of deviations: -5570079183.499998
[2026-01-26 20:40:01] 2026-01-27 01:39:17,886 | INFO     | mean x: 1769474495.5
[2026-01-26 20:40:01] 2026-01-27 01:39:17,886 | INFO     | mean y: 2520359.552631579
[2026-01-26 20:40:01] 2026-01-27 01:39:17,886 | INFO     | intersect: 21458389769.950832
[2026-01-26 20:40:01] 2026-01-27 01:39:17,886 | INFO     | chi2: 2.318536224759881
[2026-01-26 20:40:01] 2026-01-27 01:39:17,887 | INFO     | sum of square deviations: 401533110.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,887 | INFO     | sum of deviations: 2319347612.0000014
[2026-01-26 20:40:01] 2026-01-27 01:39:17,887 | INFO     | mean x: 1769474343.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,888 | INFO     | mean y: 2540455.4678899082
[2026-01-26 20:40:01] 2026-01-27 01:39:17,888 | INFO     | intersect: -10218350399.416584
[2026-01-26 20:40:01] 2026-01-27 01:39:17,888 | INFO     | chi2: 1.556861003137039
[2026-01-26 20:40:01] 2026-01-27 01:39:17,888 | INFO     | current chi2=1.556861003137039 (change=32.8515558001137 %)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,888 | INFO     | sum of square deviations: 348769330.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,889 | INFO     | sum of deviations: 2494851901.500001
[2026-01-26 20:40:01] 2026-01-27 01:39:17,889 | INFO     | mean x: 1769474190.5
[2026-01-26 20:40:01] 2026-01-27 01:39:17,889 | INFO     | mean y: 2540963.1826923075
[2026-01-26 20:40:01] 2026-01-27 01:39:17,889 | INFO     | intersect: -12655040048.381886
[2026-01-26 20:40:01] 2026-01-27 01:39:17,889 | INFO     | chi2: 1.5592775426808896
[2026-01-26 20:40:01] 2026-01-27 01:39:17,890 | INFO     | current chi2=1.5592775426808896 (change=-0.1552187086054189 %)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,890 | INFO     | right removable region: 103
[2026-01-26 20:40:01] 2026-01-27 01:39:17,890 | INFO     | sum of square deviations: 401533110.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,890 | INFO     | sum of deviations: -21907416719.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | mean x: 1769474648.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | mean y: 2562533.5412844038
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | intersect: 96544086811.43169
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | chi2: 0.9227261977494348
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | current chi2=0.9227261977494348 (change=60.20220913973441 %)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,891 | INFO     | sum of square deviations: 348769330.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,892 | INFO     | sum of deviations: -21036621650.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,892 | INFO     | mean x: 1769474800.5
[2026-01-26 20:40:01] 2026-01-27 01:39:17,892 | INFO     | mean y: 2559851.4423076925
[2026-01-26 20:40:01] 2026-01-27 01:39:17,892 | INFO     | intersect: 106731474051.91896
[2026-01-26 20:40:01] 2026-01-27 01:39:17,892 | INFO     | chi2: 0.9045229790549533
[2026-01-26 20:40:01] 2026-01-27 01:39:17,893 | INFO     | current chi2=0.9045229790549533 (change=1.9727649154082605 %)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,893 | INFO     | left removable region: 20
[2026-01-26 20:40:01] 2026-01-27 01:39:17,893 | INFO     | sum of square deviations: 177275882.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,893 | INFO     | sum of deviations: -6318428312.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,893 | INFO     | mean x: 1769474770.0
[2026-01-26 20:40:01] 2026-01-27 01:39:17,894 | INFO     | mean y: 2562371.9156626505
[2026-01-26 20:40:01] 2026-01-27 01:39:17,894 | INFO     | intersect: 63069796098.25915
[2026-01-26 20:40:01] 2026-01-27 01:39:17,894 | INFO     | chi2: 0.07722279522749477
[2026-01-26 20:40:01] 2026-01-27 01:39:17,894 | INFO     | current memory leak: -35.64 B/s (using 83 data points, chi2=0.08)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,894 | INFO     | could have reported an average CPU frequency of 1729 MHz (7 samples)
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | ..............................
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . Timing measurements:
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . get job = 0 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . initial setup = 8 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . payload setup = 8 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . stage-in = 0 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . payload execution = 6908 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,895 | INFO     | . stage-out = 0 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,896 | INFO     | . log creation = 0 s
[2026-01-26 20:40:01] 2026-01-27 01:39:17,896 | INFO     | ..............................
[2026-01-26 20:40:01] 2026-01-27 01:39:18,108 | INFO     | 
[2026-01-26 20:40:01] 2026-01-27 01:39:18,108 | INFO     | job summary report
[2026-01-26 20:40:01] 2026-01-27 01:39:18,108 | INFO     | --------------------------------------------------
[2026-01-26 20:40:01] 2026-01-27 01:39:18,108 | INFO     | PanDA job id: 6982527983
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | task id: 48310826
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | errors: (none)
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | pilot state: finished 
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | transexitcode: 0
[2026-01-26 20:40:01] 2026-01-27 01:39:18,109 | INFO     | exeerrorcode: 0
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | exeerrordiag: 
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | exitcode: 0
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | exitmsg: OK
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | cpuconsumptiontime: 51166 s
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | nevents: 400
[2026-01-26 20:40:01] 2026-01-27 01:39:18,110 | INFO     | neventsw: 0
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | pid: 30038
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | pgrp: 30038
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | corecount: 8
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | event service: False
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | sizes: {0: 2284036, 1: 2284270, 11: 2284270, 6920: 2311459, 6922: 2320457, 6923: 2320835}
[2026-01-26 20:40:01] 2026-01-27 01:39:18,111 | INFO     | --------------------------------------------------
[2026-01-26 20:40:01] 2026-01-27 01:39:18,112 | INFO     | 
[2026-01-26 20:40:01] 2026-01-27 01:39:18,112 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 20:40:01] 2026-01-27 01:39:18,139 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,140 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,140 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,140 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,143 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:40:01] 2026-01-27 01:39:18,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,143 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:40:01] 2026-01-27 01:39:18,144 | INFO     | job 6982527983 has completed (purged errors)
[2026-01-26 20:40:01] 2026-01-27 01:39:18,144 | INFO     | overall cleanup function is called
[2026-01-26 20:40:01] 2026-01-27 01:39:19,152 | INFO     | --- collectZombieJob: --- 10, [30038]
[2026-01-26 20:40:01] 2026-01-27 01:39:19,153 | INFO     | zombie collector waiting for pid 30038
[2026-01-26 20:40:01] 2026-01-27 01:39:19,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:40:01] 2026-01-27 01:39:19,153 | INFO     | collected zombie processes
[2026-01-26 20:40:01] 2026-01-27 01:39:19,153 | INFO     | will attempt to kill all subprocesses of pid=30038
[2026-01-26 20:40:01] 2026-01-27 01:39:19,226 | INFO     | process IDs to be killed: [30038] (in reverse order)
[2026-01-26 20:40:01] 2026-01-27 01:39:19,280 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:40:01] 2026-01-27 01:39:19,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:40:01] 2026-01-27 01:39:19,286 | INFO     | did not find any defunct processes belonging to 30038
[2026-01-26 20:40:01] 2026-01-27 01:39:19,289 | INFO     | did not find any defunct processes belonging to 30038
[2026-01-26 20:40:01] 2026-01-27 01:39:19,289 | INFO     | ready for new job
[2026-01-26 20:40:01] 2026-01-27 01:39:19,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:40:01] 2026-01-27 01:39:19,291 | INFO     | **************************************
[2026-01-26 20:40:01] 2026-01-27 01:39:19,292 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:40:01] 2026-01-27 01:39:19,292 | INFO     | **************************************
[2026-01-26 20:40:01] 2026-01-27 01:39:19,292 | INFO     | 
[2026-01-26 20:40:01] 2026-01-27 01:39:19,293 | INFO     | architecture information:
[2026-01-26 20:40:01] 2026-01-27 01:39:19,293 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:40:01] 2026-01-27 01:39:19,313 | INFO     | cat /etc/os-release:
[2026-01-26 20:40:01] NAME="CentOS Linux"
[2026-01-26 20:40:01] VERSION="7 (Core)"
[2026-01-26 20:40:01] ID="centos"
[2026-01-26 20:40:01] ID_LIKE="rhel fedora"
[2026-01-26 20:40:01] VERSION_ID="7"
[2026-01-26 20:40:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:40:01] ANSI_COLOR="0;31"
[2026-01-26 20:40:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:40:01] HOME_URL="https://www.centos.org/"
[2026-01-26 20:40:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:40:01] 
[2026-01-26 20:40:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:40:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:40:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:40:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:40:01] 
[2026-01-26 20:40:01] 2026-01-27 01:39:19,313 | INFO     | **************************************
[2026-01-26 20:40:01] 2026-01-27 01:39:19,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 20:40:01] 2026-01-27 01:39:19,838 | INFO     | sufficient remaining disk space (18013487104 B)
[2026-01-26 20:40:01] 2026-01-27 01:39:19,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:40:01] 2026-01-27 01:39:19,839 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:40:01] 2026-01-27 01:39:19,839 | INFO     | update_server=False
[2026-01-26 20:40:01] 2026-01-27 01:39:19,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:40:01] 2026-01-27 01:39:19,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:40:01] 2026-01-27 01:39:19,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:40:01] 2026-01-27 01:39:19,996 | INFO     | all job control threads have been joined
[2026-01-26 20:40:01] 2026-01-27 01:39:20,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:40:01] 2026-01-27 01:39:20,159 | WARNING  | process 30038 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:40:01] 2026-01-27 01:39:20,216 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:40:01] 2026-01-27 01:39:20,260 | INFO     | all payload control threads have been joined
[2026-01-26 20:40:01] 2026-01-27 01:39:20,284 | INFO     | number of running child processes to parent process 30038: 1
[2026-01-26 20:40:01] 2026-01-27 01:39:20,284 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:40:01] 2026-01-27 01:39:20,291 | INFO     | aborting job monitoring since job object (job id=6982527983) has expired
[2026-01-26 20:40:01] 2026-01-27 01:39:20,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:40:01] 2026-01-27 01:39:20,292 | INFO     | will abort loop
[2026-01-26 20:40:01] 2026-01-27 01:39:20,845 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:20,845 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:20,869 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:20,879 | INFO     | all data control threads have been joined
[2026-01-26 20:40:01] 2026-01-27 01:39:21,002 | INFO     | [job] control thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,016 | INFO     | [job] validate thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,203 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,264 | INFO     | [payload] control thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,297 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,612 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,843 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:21,883 | INFO     | [data] control thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:22,061 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:22,359 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:23,846 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:30,342 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:40:01] 2026-01-27 01:39:31,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:40:01] 2026-01-27 01:39:50,489 | INFO     | PID=25613 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 20:40:01] 2026-01-27 01:39:50,489 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:40:01] 2026-01-27 01:39:50,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:40:01] 2026-01-27 01:39:50,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:40:01] 2026-01-27 01:39:54,291 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:40:01] 2026-01-27 01:39:56,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202898081600)>', '<ExcThread(monitor, started 140202152552192)>']
[2026-01-26 20:40:01] 2026-01-27 01:39:56,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:40:01] 2026-01-27 01:39:56,510 | INFO     | [monitor] control thread has ended
[2026-01-26 20:40:01] 2026-01-27 01:40:01,032 | INFO     | all workflow threads have been joined
[2026-01-26 20:40:01] 2026-01-27 01:40:01,033 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:40:01] 2026-01-27 01:40:01,033 | INFO     | traces error code: 0
[2026-01-26 20:40:01] 2026-01-27 01:40:01,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:40:01] 2026-01-27 01:40:01,172 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:40:01] 2026-01-27 01:40:01,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:40:01] 2026-01-27 01:40:01,181 [wrapper] pilotpid: 25613
[2026-01-26 20:40:01] 2026-01-27 01:40:01,185 [wrapper] Pilot exit status: 0
[2026-01-26 20:40:01] 2026-01-27 01:40:01,200 [wrapper] pandaids: 6982527983
[2026-01-26 20:40:01] 2026-01-27 01:40:01,245 [wrapper] cleanup supervisor_pilot  8160 25614
[2026-01-26 20:40:01] 2026-01-27 01:40:01,250 [wrapper] Test setup, not cleaning
[2026-01-26 20:40:01] 2026-01-27 01:40:01,256 [wrapper] apfmon messages muted
[2026-01-26 20:40:01] 2026-01-27 01:40:01,260 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:40:01] 2026-01-27 01:40:01,264 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:40:01]  *** Error codes and diagnostics ***
[2026-01-26 20:40:01]     "exeErrorCode": 0,
[2026-01-26 20:40:01]     "exeErrorDiag": "",
[2026-01-26 20:40:01]     "pilotErrorCode": 0,
[2026-01-26 20:40:01]     "pilotErrorDiag": "",
[2026-01-26 20:40:01]  *** Listing of results directory ***
[2026-01-26 20:40:01] total 677752
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 00:15 pilot3.tar.gz
[2026-01-26 20:40:01] -rwx------ 1 boincer umatlas     36322 Jan 25 00:16 runpilot2-wrapper.sh
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 00:17 queuedata.json
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas       100 Jan 26 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:40:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 18:43 run_atlas
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas       105 Jan 26 18:43 job.xml
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas 500822981 Jan 26 18:43 EVNT.48310824._000094.pool.root.1
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:43 start_atlas.sh
[2026-01-26 20:40:01] drwxrwx--x 2 boincer umatlas      4096 Jan 26 18:43 shared
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas    597763 Jan 26 18:43 input.tar.gz
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas         0 Jan 26 18:43 boinc_lockfile
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas      2524 Jan 26 18:43 pandaJob.out
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas        57 Jan 26 18:43 setup.sh.local
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas   1006441 Jan 26 18:43 agis_schedconf.cvmfs.json
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas   1516246 Jan 26 18:43 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas       430 Jan 26 18:43 workernode_map.json
[2026-01-26 20:40:01] drwx------ 5 boincer umatlas      4096 Jan 26 18:43 pilot3
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas      5909 Jan 26 20:36 init_data.xml
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas 186582544 Jan 26 20:38 HITS.48310826._008752.pool.root.1
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas        95 Jan 26 20:39 pilot_heartbeat.json
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas      1048 Jan 26 20:39 memory_monitor_summary.json
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas       530 Jan 26 20:39 boinc_task_state.xml
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas    352220 Jan 26 20:39 log.48310826._008752.job.log.tgz.1
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas      6395 Jan 26 20:39 heartbeat.json
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 20:39 boinc_mmap_file
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas        27 Jan 26 20:39 wrapper_checkpoint.txt
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas      5331 Jan 26 20:40 pilotlog.txt
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas    986748 Jan 26 20:40 log.48310826._008752.job.log.1
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas       357 Jan 26 20:40 output.list
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas       620 Jan 26 20:40 runtime_log
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas   1351680 Jan 26 20:40 result.tar.gz
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas      9336 Jan 26 20:40 runtime_log.err
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas       657 Jan 26 20:40 mmfNDmBf738n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0C0KDm5uerIn.diag
[2026-01-26 20:40:01] -rw-r--r-- 1 boincer umatlas     21013 Jan 26 20:40 stderr.txt
[2026-01-26 20:40:01] HITS file was successfully produced:
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas 186582544 Jan 26 20:38 shared/HITS.pool.root.1
[2026-01-26 20:40:01]  *** Contents of shared directory: ***
[2026-01-26 20:40:01] total 673224
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas 500822981 Jan 26 18:43 ATLAS.root_0
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 18:43 start_atlas.sh
[2026-01-26 20:40:01] -rw-r--r-- 2 boincer umatlas    597763 Jan 26 18:43 input.tar.gz
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas 186582544 Jan 26 20:38 HITS.pool.root.1
[2026-01-26 20:40:01] -rw------- 1 boincer umatlas   1351680 Jan 26 20:40 result.tar.gz
20:40:02 (21916): run_atlas exited; CPU time 51104.318313
20:40:02 (21916): called boinc_finish(0)

</stderr_txt>
]]>

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