Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:22 (4149870): wrapper (7.7.26015): starting
18:58:22 (4149870): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 18:58:22] Arguments: --nthreads 9
[2026-01-26 18:58:22] Threads: 9
[2026-01-26 18:58:22] Checking for CVMFS
[2026-01-26 18:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:58:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:58:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:58:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:58:23] 2.13.3.0 2295398 42050 109640 155566 2 188 19793756 37030912 1832 16776704 0 28795256 99.970 1835264 34795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 18:58:23] CVMFS is ok
[2026-01-26 18:58:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:58:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:58:23] Further information can be found at the LHC@home message board.
[2026-01-26 18:58:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:58:23] Checking for apptainer binary...
[2026-01-26 18:58:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:58:23] Running /usr/bin/apptainer --version
[2026-01-26 18:58:23] apptainer version 1.4.5-2.el9
[2026-01-26 18:58:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:58:23] c-205-36.aglt2.org
[2026-01-26 18:58:23] apptainer works
[2026-01-26 18:58:23] Set ATHENA_PROC_NUMBER=9
[2026-01-26 18:58:23] Set ATHENA_CORE_NUMBER=9
[2026-01-26 18:58:23] Starting ATLAS job with PandaID=6983326776
[2026-01-26 18:58:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:23:02]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:23:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 20:23:02]  is_altstaged=None
[2026-01-26 20:23:02]  is_tar=False
[2026-01-26 20:23:02]  lfn=log.48318034._000581.job.log.tgz.1
[2026-01-26 20:23:02]  mtime=0
[2026-01-26 20:23:02]  protocol_id=None
[2026-01-26 20:23:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 20:23:02]  replicas=None
[2026-01-26 20:23:02]  scope=mc23_13p6TeV
[2026-01-26 20:23:02]  status=None
[2026-01-26 20:23:02]  status_code=0
[2026-01-26 20:23:02]  storage_token=
[2026-01-26 20:23:02]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6983326776/log.48318034._000581.job.log.tgz.1
[2026-01-26 20:23:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/74/log.48318034._000581.job.log.tgz.1
[2026-01-26 20:23:02]  workdir=None
[2026-01-26 20:23:02] ]
[2026-01-26 20:23:02] 2026-01-27 01:22:28,078 | INFO     | transferring file log.48318034._000581.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6983326776/log.48318034._000581.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 20:23:02] 2026-01-27 01:22:28,078 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6983326776/log.48318034._000581.job.log.tgz.1 /tmp/boinchome/slots/2/log.48318034._000581.job
[2026-01-26 20:23:02] 2026-01-27 01:22:28,095 | INFO     | adding to output.list: log.48318034._000581.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/74/log.48318034._000581.job.log.tg
[2026-01-26 20:23:02] 2026-01-27 01:22:28,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 20:23:02] 2026-01-27 01:22:28,096 | INFO     | summary of transferred files:
[2026-01-26 20:23:02] 2026-01-27 01:22:28,096 | INFO     |  -- lfn=log.48318034._000581.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 20:23:02] 2026-01-27 01:22:28,096 | INFO     | stage-out finished correctly
[2026-01-26 20:23:02] 2026-01-27 01:22:28,821 | INFO     | time since job start (5036s) is within the limit (349056.0s)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 20:23:02] 2026-01-27 01:22:29,944 | INFO     | job 6983326776 has state=finished
[2026-01-26 20:23:02] 2026-01-27 01:22:29,944 | INFO     | preparing for final server update for job 6983326776 in state='finished'
[2026-01-26 20:23:02] 2026-01-27 01:22:29,944 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6983326776/jobReport.json
[2026-01-26 20:23:02] 2026-01-27 01:22:29,947 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-01-26 20:23:02] 2026-01-27 01:22:29,948 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,948 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:23:02] 2026-01-27 01:22:29,948 | INFO     | job 6983326776 has finished - writing final server update
[2026-01-26 20:23:02] 2026-01-27 01:22:29,948 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,955 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983326776/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,956 | INFO     | extracted standard info from prmon json
[2026-01-26 20:23:02] 2026-01-27 01:22:29,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:23:02] 2026-01-27 01:22:29,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:23:02] 2026-01-27 01:22:29,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:23:02] 2026-01-27 01:22:29,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:23:02] 2026-01-27 01:22:29,958 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:23:02] 2026-01-27 01:22:29,959 | INFO     | sum of square deviations: 136095575.0
[2026-01-26 20:23:02] 2026-01-27 01:22:29,959 | INFO     | sum of deviations: -1814536683.0000002
[2026-01-26 20:23:02] 2026-01-27 01:22:29,959 | INFO     | mean x: 1769474522.5
[2026-01-26 20:23:02] 2026-01-27 01:22:29,960 | INFO     | mean y: 2594314.6578947366
[2026-01-26 20:23:02] 2026-01-27 01:22:29,960 | INFO     | intersect: 23594665039.29504
[2026-01-26 20:23:02] 2026-01-27 01:22:29,960 | INFO     | chi2: 0.013147603825827036
[2026-01-26 20:23:02] 2026-01-27 01:22:29,960 | INFO     | current memory leak: -13.33 B/s (using 76 data points, chi2=0.01)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,960 | INFO     | could have reported an average CPU frequency of 2712 MHz (6 samples)
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | ..............................
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . Timing measurements:
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . get job = 0 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . initial setup = 4 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . payload setup = 3 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . stage-in = 0 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,961 | INFO     | . payload execution = 5016 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,962 | INFO     | . stage-out = 0 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,962 | INFO     | . log creation = 0 s
[2026-01-26 20:23:02] 2026-01-27 01:22:29,962 | INFO     | ..............................
[2026-01-26 20:23:02] 2026-01-27 01:22:30,065 | INFO     | 
[2026-01-26 20:23:02] 2026-01-27 01:22:30,065 | INFO     | job summary report
[2026-01-26 20:23:02] 2026-01-27 01:22:30,065 | INFO     | --------------------------------------------------
[2026-01-26 20:23:02] 2026-01-27 01:22:30,065 | INFO     | PanDA job id: 6983326776
[2026-01-26 20:23:02] 2026-01-27 01:22:30,065 | INFO     | task id: 48318034
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | errors: (none)
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | pilot state: finished 
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | transexitcode: 0
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | exeerrorcode: 0
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | exeerrordiag: 
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | exitcode: 0
[2026-01-26 20:23:02] 2026-01-27 01:22:30,066 | INFO     | exitmsg: OK
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | cpuconsumptiontime: 41659 s
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | nevents: 400
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | neventsw: 0
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | pid: 4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | pgrp: 4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | corecount: 9
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | event service: False
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | sizes: {0: 2284197, 11: 2284197, 5023: 2310603, 5024: 2319601, 5025: 2319657, 5026: 2319851}
[2026-01-26 20:23:02] 2026-01-27 01:22:30,067 | INFO     | --------------------------------------------------
[2026-01-26 20:23:02] 2026-01-27 01:22:30,068 | INFO     | 
[2026-01-26 20:23:02] 2026-01-27 01:22:30,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 20:23:02] 2026-01-27 01:22:30,084 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,084 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,084 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,084 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:23:02] 2026-01-27 01:22:30,086 | INFO     | job 6983326776 has completed (purged errors)
[2026-01-26 20:23:02] 2026-01-27 01:22:30,087 | INFO     | overall cleanup function is called
[2026-01-26 20:23:02] 2026-01-27 01:22:30,518 | WARNING  | process 4157994 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:23:02] 2026-01-27 01:22:30,668 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:23:02] 2026-01-27 01:22:30,855 | INFO     | number of running child processes to parent process 4157994: 1
[2026-01-26 20:23:02] 2026-01-27 01:22:30,856 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:23:02] 2026-01-27 01:22:30,856 | INFO     | aborting job monitoring since job object (job id=6983326776) has expired
[2026-01-26 20:23:02] 2026-01-27 01:22:31,091 | INFO     | --- collectZombieJob: --- 10, [4157994]
[2026-01-26 20:23:02] 2026-01-27 01:22:31,092 | INFO     | zombie collector waiting for pid 4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:31,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:23:02] 2026-01-27 01:22:31,092 | INFO     | collected zombie processes
[2026-01-26 20:23:02] 2026-01-27 01:22:31,092 | INFO     | will attempt to kill all subprocesses of pid=4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:31,277 | INFO     | process IDs to be killed: [4157994] (in reverse order)
[2026-01-26 20:23:02] 2026-01-27 01:22:31,334 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:23:02] 2026-01-27 01:22:31,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:23:02] 2026-01-27 01:22:31,340 | INFO     | did not find any defunct processes belonging to 4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:31,344 | INFO     | did not find any defunct processes belonging to 4157994
[2026-01-26 20:23:02] 2026-01-27 01:22:31,345 | INFO     | ready for new job
[2026-01-26 20:23:02] 2026-01-27 01:22:31,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:23:02] 2026-01-27 01:22:31,347 | INFO     | **************************************
[2026-01-26 20:23:02] 2026-01-27 01:22:31,347 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:23:02] 2026-01-27 01:22:31,347 | INFO     | **************************************
[2026-01-26 20:23:02] 2026-01-27 01:22:31,347 | INFO     | 
[2026-01-26 20:23:02] 2026-01-27 01:22:31,349 | INFO     | architecture information:
[2026-01-26 20:23:02] 2026-01-27 01:22:31,349 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:23:02] 2026-01-27 01:22:31,361 | INFO     | cat /etc/os-release:
[2026-01-26 20:23:02] NAME="CentOS Linux"
[2026-01-26 20:23:02] VERSION="7 (Core)"
[2026-01-26 20:23:02] ID="centos"
[2026-01-26 20:23:02] ID_LIKE="rhel fedora"
[2026-01-26 20:23:02] VERSION_ID="7"
[2026-01-26 20:23:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:23:02] ANSI_COLOR="0;31"
[2026-01-26 20:23:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:23:02] HOME_URL="https://www.centos.org/"
[2026-01-26 20:23:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:23:02] 
[2026-01-26 20:23:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:23:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:23:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:23:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:23:02] 
[2026-01-26 20:23:02] 2026-01-27 01:22:31,362 | INFO     | **************************************
[2026-01-26 20:23:02] 2026-01-27 01:22:31,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 20:23:02] 2026-01-27 01:22:31,878 | INFO     | sufficient remaining disk space (40607154176 B)
[2026-01-26 20:23:02] 2026-01-27 01:22:31,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:23:02] 2026-01-27 01:22:31,879 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:23:02] 2026-01-27 01:22:31,879 | INFO     | update_server=False
[2026-01-26 20:23:02] 2026-01-27 01:22:31,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:23:02] 2026-01-27 01:22:31,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:23:02] 2026-01-27 01:22:31,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:23:02] 2026-01-27 01:22:31,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:23:02] 2026-01-27 01:22:31,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:23:02] 2026-01-27 01:22:31,880 | INFO     | aborting loop
[2026-01-26 20:23:02] 2026-01-27 01:22:31,972 | INFO     | all data control threads have been joined
[2026-01-26 20:23:02] 2026-01-27 01:22:32,423 | INFO     | all payload control threads have been joined
[2026-01-26 20:23:02] 2026-01-27 01:22:32,885 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:32,885 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:32,886 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:32,977 | INFO     | [data] control thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,057 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,078 | INFO     | all job control threads have been joined
[2026-01-26 20:23:02] 2026-01-27 01:22:33,429 | INFO     | [payload] control thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,525 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,616 | INFO     | [job] validate thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,668 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,724 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,855 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:33,886 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:34,083 | INFO     | [job] control thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:34,184 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:35,886 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:39,361 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:23:02] 2026-01-27 01:22:42,629 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:23:02] 2026-01-27 01:22:43,634 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:23:02] 2026-01-27 01:22:44,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561251440448)>', '<ExcThread(monitor, started 140560757143296)>']
[2026-01-26 20:23:02] 2026-01-27 01:22:50,003 | INFO     | all workflow threads have been joined
[2026-01-26 20:23:02] 2026-01-27 01:22:50,003 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:23:02] 2026-01-27 01:22:50,003 | INFO     | traces error code: 0
[2026-01-26 20:23:02] 2026-01-27 01:22:50,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:23:02] 2026-01-27 01:23:02,126 | INFO     | PID=4153589 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 20:23:02] 2026-01-27 01:23:02,127 | INFO     | .. there are 3 such processes running
[2026-01-26 20:23:02] 2026-01-27 01:23:02,127 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:23:02] 2026-01-27 01:23:02,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:23:02] 2026-01-27 01:23:02,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:23:02] 2026-01-27 01:23:02,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:23:02] 2026-01-27 01:23:02,128 | INFO     | [monitor] control thread has ended
[2026-01-26 20:23:02] 2026-01-27 01:23:02,227 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:23:02] 2026-01-27 01:23:02,230 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:23:02] 2026-01-27 01:23:02,232 [wrapper] pilotpid: 4153589
[2026-01-26 20:23:02] 2026-01-27 01:23:02,235 [wrapper] Pilot exit status: 0
[2026-01-26 20:23:02] 2026-01-27 01:23:02,244 [wrapper] pandaids: 6983326776
[2026-01-26 20:23:02] 2026-01-27 01:23:02,280 [wrapper] cleanup supervisor_pilot   32526 4153590
[2026-01-26 20:23:02] 2026-01-27 01:23:02,283 [wrapper] Test setup, not cleaning
[2026-01-26 20:23:02] 2026-01-27 01:23:02,285 [wrapper] apfmon messages muted
[2026-01-26 20:23:02] 2026-01-27 01:23:02,288 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:23:02] 2026-01-27 01:23:02,290 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:23:02]  *** Error codes and diagnostics ***
[2026-01-26 20:23:02]     "exeErrorCode": 0,
[2026-01-26 20:23:02]     "exeErrorDiag": "",
[2026-01-26 20:23:02]     "pilotErrorCode": 0,
[2026-01-26 20:23:02]     "pilotErrorDiag": "",
[2026-01-26 20:23:02]  *** Listing of results directory ***
[2026-01-26 20:23:02] total 672256
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 13:47 pilot3.tar.gz
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 13:48 queuedata.json
[2026-01-26 20:23:02] -rwx------. 1 boincer umatlas     36322 Jan 25 13:49 runpilot2-wrapper.sh
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas       100 Jan 26 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:23:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 18:58 run_atlas
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas       105 Jan 26 18:58 job.xml
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas 498549734 Jan 26 18:58 EVNT.48318032._000012.pool.root.1
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:58 start_atlas.sh
[2026-01-26 20:23:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 18:58 shared
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 18:58 input.tar.gz
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas         0 Jan 26 18:58 boinc_lockfile
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas      2531 Jan 26 18:58 pandaJob.out
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas   1006441 Jan 26 18:58 agis_schedconf.cvmfs.json
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas   1516246 Jan 26 18:58 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas       440 Jan 26 18:58 workernode_map.json
[2026-01-26 20:23:02] drwx------. 5 boincer umatlas      4096 Jan 26 18:58 pilot3
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas      6530 Jan 26 20:20 init_data.xml
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas       530 Jan 26 20:21 boinc_task_state.xml
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas 183668690 Jan 26 20:21 HITS.48318034._000581.pool.root.1
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas      1032 Jan 26 20:22 memory_monitor_summary.json
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas    370768 Jan 26 20:22 log.48318034._000581.job.log.tgz.1
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas      6372 Jan 26 20:22 heartbeat.json
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas        27 Jan 26 20:23 wrapper_checkpoint.txt
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 20:23 boinc_mmap_file
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas        95 Jan 26 20:23 pilot_heartbeat.json
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas       822 Jan 26 20:23 pilotlog.txt
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas    744349 Jan 26 20:23 log.48318034._000581.job.log.1
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas       357 Jan 26 20:23 output.list
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas       620 Jan 26 20:23 runtime_log
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas   1136640 Jan 26 20:23 result.tar.gz
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas      8816 Jan 26 20:23 runtime_log.err
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas       650 Jan 26 20:23 37uMDmkLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYS1KDmLTFMdn.diag
[2026-01-26 20:23:02] -rw-r--r--. 1 boincer umatlas     21425 Jan 26 20:23 stderr.txt
[2026-01-26 20:23:02] HITS file was successfully produced:
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas 183668690 Jan 26 20:21 shared/HITS.pool.root.1
[2026-01-26 20:23:02]  *** Contents of shared directory: ***
[2026-01-26 20:23:02] total 667952
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas 498549734 Jan 26 18:58 ATLAS.root_0
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:58 start_atlas.sh
[2026-01-26 20:23:02] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 18:58 input.tar.gz
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas 183668690 Jan 26 20:21 HITS.pool.root.1
[2026-01-26 20:23:02] -rw-------. 1 boincer umatlas   1136640 Jan 26 20:23 result.tar.gz
20:23:04 (4149870): run_atlas exited; CPU time 41765.839768
20:23:04 (4149870): called boinc_finish(0)

</stderr_txt>
]]>

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