Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:33:02 (1438868): wrapper (7.7.26015): starting
11:33:02 (1438868): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 11:33:02] Arguments: --nthreads 3
[2026-01-27 11:33:02] Threads: 3
[2026-01-27 11:33:02] Checking for CVMFS
[2026-01-27 11:33:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 11:33:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 11:33:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 11:33:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 11:33:03] 2.9.2.0 20534 9652 88472 155581 3 50 26882317 36864000 0 130560 0 4055784 99.986 311815 7491 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 11:33:03] CVMFS is ok
[2026-01-27 11:33:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 11:33:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 11:33:03] Further information can be found at the LHC@home message board.
[2026-01-27 11:33:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 11:33:03] Checking for apptainer binary...
[2026-01-27 11:33:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 11:33:03] Running /usr/bin/apptainer --version
[2026-01-27 11:33:03] apptainer version 1.4.1-1.1
[2026-01-27 11:33:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 11:33:03] thA367a
[2026-01-27 11:33:03] apptainer works
[2026-01-27 11:33:03] Set ATHENA_PROC_NUMBER=3
[2026-01-27 11:33:03] Set ATHENA_CORE_NUMBER=3
[2026-01-27 11:33:03] Starting ATLAS job with PandaID=6984042386
[2026-01-27 11:33:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 12:55:25]  *** The last 200 lines of the pilot log: ***
[2026-01-27 12:55:25]  replicas=None
[2026-01-27 12:55:25]  scope=mc23_13p6TeV
[2026-01-27 12:55:25]  status=None
[2026-01-27 12:55:25]  status_code=0
[2026-01-27 12:55:25]  storage_token=
[2026-01-27 12:55:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6984042386/log.47929392._005087.job.log.tgz.1
[2026-01-27 12:55:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/03/log.47929392._005087.job.log.tgz.1
[2026-01-27 12:55:25]  workdir=None
[2026-01-27 12:55:25] ]
[2026-01-27 12:55:25] 2026-01-27 11:54:29,401 | INFO     | transferring file log.47929392._005087.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6984042386/log.47929392._005087.job.log.tgz.1 to /local/data/boinc/
[2026-01-27 12:55:25] 2026-01-27 11:54:29,401 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6984042386/log.47929392._005087.job.log.tgz.1 /local/data/boinc/slots/0/log.47929392._0050
[2026-01-27 12:55:25] 2026-01-27 11:54:29,413 | INFO     | adding to output.list: log.47929392._005087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/03/log.47929392._005087.job.log.tg
[2026-01-27 12:55:25] 2026-01-27 11:54:29,413 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 12:55:25] 2026-01-27 11:54:29,413 | INFO     | summary of transferred files:
[2026-01-27 12:55:25] 2026-01-27 11:54:29,413 | INFO     |  -- lfn=log.47929392._005087.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 12:55:25] 2026-01-27 11:54:29,414 | INFO     | stage-out finished correctly
[2026-01-27 12:55:25] 2026-01-27 11:54:31,041 | INFO     | time since job start (4879s) is within the limit (349056.0s)
[2026-01-27 12:55:25] 2026-01-27 11:54:31,142 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 12:55:25] 2026-01-27 11:54:32,922 | INFO     | job 6984042386 has state=finished
[2026-01-27 12:55:25] 2026-01-27 11:54:32,923 | INFO     | preparing for final server update for job 6984042386 in state='finished'
[2026-01-27 12:55:25] 2026-01-27 11:54:32,923 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6984042386/jobReport.json
[2026-01-27 12:55:25] 2026-01-27 11:54:32,924 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-27 12:55:25] 2026-01-27 11:54:32,924 | INFO     | this job has now completed (state=finished)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,925 | INFO     | log transfer has been attempted: DONE
[2026-01-27 12:55:25] 2026-01-27 11:54:32,925 | INFO     | job 6984042386 has finished - writing final server update
[2026-01-27 12:55:25] 2026-01-27 11:54:32,925 | INFO     | total number of processed events: 400 (read)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6984042386/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | INFO     | extracted standard info from prmon json
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 12:55:25] 2026-01-27 11:54:32,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 12:55:25] 2026-01-27 11:54:32,927 | INFO     | fitting pss+swap vs Time
[2026-01-27 12:55:25] 2026-01-27 11:54:32,927 | INFO     | sum of square deviations: 120605052.0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | sum of deviations: -14906304040.0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | mean x: 1769512510.0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | mean y: 2518655.2739726026
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | intersect: 218707216669.44623
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | chi2: 0.13752266449593514
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | current memory leak: -123.60 B/s (using 73 data points, chi2=0.14)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | could have reported an average CPU frequency of 3614 MHz (6 samples)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | ..............................
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . Timing measurements:
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . get job = 0 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . initial setup = 3 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . payload setup = 2 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . stage-in = 0 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . payload execution = 4859 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . stage-out = 0 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | . log creation = 0 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,928 | INFO     | ..............................
[2026-01-27 12:55:25] 2026-01-27 11:54:32,957 | INFO     | 
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | job summary report
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | --------------------------------------------------
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | PanDA job id: 6984042386
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | task id: 47929392
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | errors: (none)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | pilot state: finished 
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | transexitcode: 0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | exeerrorcode: 0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | exeerrordiag: 
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | exitcode: 0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | exitmsg: OK
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | cpuconsumptiontime: 13939 s
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | nevents: 400
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | neventsw: 0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | pid: 1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | pgrp: 1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | corecount: 3
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | event service: False
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | sizes: {0: 2284284, 11: 2284284, 4865: 2310696, 4866: 2319755, 4868: 2319755, 4869: 2319949}
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | --------------------------------------------------
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | 
[2026-01-27 12:55:25] 2026-01-27 11:54:32,958 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,970 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 12:55:25] 2026-01-27 11:54:32,971 | INFO     | job 6984042386 has completed (purged errors)
[2026-01-27 12:55:25] 2026-01-27 11:54:32,971 | INFO     | overall cleanup function is called
[2026-01-27 12:55:25] 2026-01-27 11:54:33,348 | WARNING  | process 1447335 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6984042386/payload.stdout) since it has not been created yet
[2026-01-27 12:55:25] 2026-01-27 11:54:33,377 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 12:55:25] 2026-01-27 11:54:33,387 | INFO     | sufficient remaining disk space (233035530240 B)
[2026-01-27 12:55:25] 2026-01-27 11:54:33,387 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 12:55:25] 2026-01-27 11:54:33,388 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6984042386/HITS.47929392._005087.pool.root.1 since it does not exist
[2026-01-27 12:55:25] 2026-01-27 11:54:33,426 | INFO     | number of running child processes to parent process 1447335: 1
[2026-01-27 12:55:25] 2026-01-27 11:54:33,426 | INFO     | maximum number of monitored processes: 6
[2026-01-27 12:55:25] 2026-01-27 11:54:33,426 | INFO     | aborting job monitoring since job object (job id=6984042386) has expired
[2026-01-27 12:55:25] 2026-01-27 11:54:33,977 | INFO     | --- collectZombieJob: --- 10, [1447335]
[2026-01-27 12:55:25] 2026-01-27 11:54:33,977 | INFO     | zombie collector waiting for pid 1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:33,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 12:55:25] 2026-01-27 11:54:33,977 | INFO     | collected zombie processes
[2026-01-27 12:55:25] 2026-01-27 11:54:33,977 | INFO     | will attempt to kill all subprocesses of pid=1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:34,018 | INFO     | process IDs to be killed: [1447335] (in reverse order)
[2026-01-27 12:55:25] 2026-01-27 11:54:34,042 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 12:55:25] 2026-01-27 11:54:34,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 12:55:25] 2026-01-27 11:54:34,043 | INFO     | did not find any defunct processes belonging to 1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:34,044 | INFO     | did not find any defunct processes belonging to 1447335
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | ready for new job
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | **************************************
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | **************************************
[2026-01-27 12:55:25] 2026-01-27 11:54:34,045 | INFO     | 
[2026-01-27 12:55:25] 2026-01-27 11:54:34,046 | INFO     | architecture information:
[2026-01-27 12:55:25] 2026-01-27 11:54:34,046 | INFO     | executing command: cat /etc/os-release
[2026-01-27 12:55:25] 2026-01-27 11:54:34,055 | INFO     | cat /etc/os-release:
[2026-01-27 12:55:25] NAME="CentOS Linux"
[2026-01-27 12:55:25] VERSION="7 (Core)"
[2026-01-27 12:55:25] ID="centos"
[2026-01-27 12:55:25] ID_LIKE="rhel fedora"
[2026-01-27 12:55:25] VERSION_ID="7"
[2026-01-27 12:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 12:55:25] ANSI_COLOR="0;31"
[2026-01-27 12:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 12:55:25] HOME_URL="https://www.centos.org/"
[2026-01-27 12:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 12:55:25] 
[2026-01-27 12:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 12:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 12:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 12:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 12:55:25] 
[2026-01-27 12:55:25] 2026-01-27 11:54:34,055 | INFO     | **************************************
[2026-01-27 12:55:25] 2026-01-27 11:54:34,558 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 12:55:25] 2026-01-27 11:54:34,571 | INFO     | sufficient remaining disk space (233035530240 B)
[2026-01-27 12:55:25] 2026-01-27 11:54:34,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 12:55:25] 2026-01-27 11:54:34,571 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 12:55:25] 2026-01-27 11:54:34,572 | INFO     | update_server=False
[2026-01-27 12:55:25] 2026-01-27 11:54:34,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 12:55:25] 2026-01-27 11:54:34,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:55:25] 2026-01-27 11:54:34,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:55:25] 2026-01-27 11:54:34,572 | INFO     | aborting loop
[2026-01-27 12:55:25] 2026-01-27 11:54:34,817 | INFO     | all payload control threads have been joined
[2026-01-27 12:55:25] 2026-01-27 11:54:34,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 12:55:25] 2026-01-27 11:54:35,015 | INFO     | all job control threads have been joined
[2026-01-27 12:55:25] 2026-01-27 11:54:35,544 | INFO     | all data control threads have been joined
[2026-01-27 12:55:25] 2026-01-27 11:54:35,576 | INFO     | [job] queue monitor thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:35,576 | INFO     | [job] retrieve thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:35,577 | INFO     | [job] job monitor thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:35,578 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:35,695 | INFO     | [data] copytool_in thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:35,823 | INFO     | [payload] control thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,017 | INFO     | [payload] failed_post thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,021 | INFO     | [job] control thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,550 | INFO     | [data] control thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,571 | INFO     | [payload] validate_post thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,954 | INFO     | [job] validate thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:36,958 | INFO     | [data] copytool_out thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:37,051 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:37,060 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:37,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 12:55:25] 2026-01-27 11:54:41,187 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:54:45,144 | INFO     | job.realtimelogging is not enabled
[2026-01-27 12:55:25] 2026-01-27 11:54:46,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 12:55:25] 2026-01-27 11:55:04,152 | INFO     | PID=1442910 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 12:55:25] 2026-01-27 11:55:04,153 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 12:55:25] 2026-01-27 11:55:04,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 12:55:25] 2026-01-27 11:55:04,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 12:55:25] 2026-01-27 11:55:17,919 | INFO     | [monitor] cgroup control has ended
[2026-01-27 12:55:25] 2026-01-27 11:55:20,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407654008640)>', '<ExcThread(monitor, started 140407035913984)>']
[2026-01-27 12:55:25] 2026-01-27 11:55:20,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 12:55:25] 2026-01-27 11:55:20,225 | INFO     | [monitor] control thread has ended
[2026-01-27 12:55:25] 2026-01-27 11:55:25,043 | INFO     | all workflow threads have been joined
[2026-01-27 12:55:25] 2026-01-27 11:55:25,043 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 12:55:25] 2026-01-27 11:55:25,043 | INFO     | traces error code: 0
[2026-01-27 12:55:25] 2026-01-27 11:55:25,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 12:55:25] 2026-01-27 11:55:25,095 [wrapper] ==== pilot stdout END ====
[2026-01-27 12:55:25] 2026-01-27 11:55:25,097 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 12:55:25] 2026-01-27 11:55:25,099 [wrapper] pilotpid: 1442910
[2026-01-27 12:55:25] 2026-01-27 11:55:25,102 [wrapper] Pilot exit status: 0
[2026-01-27 12:55:25] 2026-01-27 11:55:25,109 [wrapper] pandaids: 6984042386
[2026-01-27 12:55:25] 2026-01-27 11:55:25,125 [wrapper] cleanup supervisor_pilot 1452683 1442911
[2026-01-27 12:55:25] 2026-01-27 11:55:25,127 [wrapper] Test setup, not cleaning
[2026-01-27 12:55:25] 2026-01-27 11:55:25,129 [wrapper] apfmon messages muted
[2026-01-27 12:55:25] 2026-01-27 11:55:25,132 [wrapper] ==== wrapper stdout END ====
[2026-01-27 12:55:25] 2026-01-27 11:55:25,134 [wrapper] ==== wrapper stderr END ====
[2026-01-27 12:55:25]  *** Error codes and diagnostics ***
[2026-01-27 12:55:25]     "exeErrorCode": 0,
[2026-01-27 12:55:25]     "exeErrorDiag": "",
[2026-01-27 12:55:25]     "pilotErrorCode": 0,
[2026-01-27 12:55:25]     "pilotErrorDiag": "",
[2026-01-27 12:55:25]  *** Listing of results directory ***
[2026-01-27 12:55:25] total 430696
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 12:55:25] -rwx------ 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:21 queuedata.json
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc       100 Jan 27 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 12:55:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 11:33 run_atlas
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc       105 Jan 27 11:33 job.xml
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc 253143905 Jan 27 11:33 EVNT.47929390._000193.pool.root.1
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc    597764 Jan 27 11:33 input.tar.gz
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc     15845 Jan 27 11:33 start_atlas.sh
[2026-01-27 12:55:25] drwxrwx--x 2 boinc boinc      4096 Jan 27 11:33 shared
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc         0 Jan 27 11:33 boinc_setup_complete
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc      6440 Jan 27 11:33 init_data.xml
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc         0 Jan 27 11:33 boinc_lockfile
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc      2551 Jan 27 11:33 pandaJob.out
[2026-01-27 12:55:25] -rw------- 1 boinc boinc   1002845 Jan 27 11:33 agis_schedconf.cvmfs.json
[2026-01-27 12:55:25] -rw------- 1 boinc boinc   1516246 Jan 27 11:33 agis_ddmendpoints.agis.ALL.json
[2026-01-27 12:55:25] -rw------- 1 boinc boinc       428 Jan 27 11:33 workernode_map.json
[2026-01-27 12:55:25] drwx------ 5 boinc boinc      4096 Jan 27 11:33 pilot3
[2026-01-27 12:55:25] -rw------- 1 boinc boinc 182024300 Jan 27 12:54 HITS.47929392._005087.pool.root.1
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc       529 Jan 27 12:54 boinc_task_state.xml
[2026-01-27 12:55:25] -rw------- 1 boinc boinc      1015 Jan 27 12:54 memory_monitor_summary.json
[2026-01-27 12:55:25] -rw------- 1 boinc boinc    246742 Jan 27 12:54 log.47929392._005087.job.log.tgz.1
[2026-01-27 12:55:25] -rw------- 1 boinc boinc      6327 Jan 27 12:54 heartbeat.json
[2026-01-27 12:55:25] -rw------- 1 boinc boinc        95 Jan 27 12:55 pilot_heartbeat.json
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc      8192 Jan 27 12:55 boinc_mmap_file
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc        27 Jan 27 12:55 wrapper_checkpoint.txt
[2026-01-27 12:55:25] -rw------- 1 boinc boinc      4820 Jan 27 12:55 pilotlog.txt
[2026-01-27 12:55:25] -rw------- 1 boinc boinc    716361 Jan 27 12:55 log.47929392._005087.job.log.1
[2026-01-27 12:55:25] -rw------- 1 boinc boinc       357 Jan 27 12:55 output.list
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc       620 Jan 27 12:55 runtime_log
[2026-01-27 12:55:25] -rw------- 1 boinc boinc    983040 Jan 27 12:55 result.tar.gz
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc      8901 Jan 27 12:55 runtime_log.err
[2026-01-27 12:55:25] -rw------- 1 boinc boinc       658 Jan 27 12:55 kpKKDmu9T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTC9KDmSDEpgn.diag
[2026-01-27 12:55:25] -rw-r--r-- 1 boinc boinc     22030 Jan 27 12:55 stderr.txt
[2026-01-27 12:55:25] HITS file was successfully produced:
[2026-01-27 12:55:25] -rw------- 1 boinc boinc 182024300 Jan 27 12:54 shared/HITS.pool.root.1
[2026-01-27 12:55:25]  *** Contents of shared directory: ***
[2026-01-27 12:55:25] total 426540
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc 253143905 Jan 27 11:33 ATLAS.root_0
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc    597764 Jan 27 11:33 input.tar.gz
[2026-01-27 12:55:25] -rw-r--r-- 2 boinc boinc     15845 Jan 27 11:33 start_atlas.sh
[2026-01-27 12:55:25] -rw------- 1 boinc boinc 182024300 Jan 27 12:54 HITS.pool.root.1
[2026-01-27 12:55:25] -rw------- 1 boinc boinc    983040 Jan 27 12:55 result.tar.gz
12:55:26 (1438868): run_atlas exited; CPU time 13961.197127
12:55:26 (1438868): called boinc_finish(0)

</stderr_txt>
]]>

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