Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:13 (1009087): wrapper (7.7.26015): starting
18:02:13 (1009087): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:02:13] Arguments: --nthreads 8
[2026-01-26 18:02:13] Threads: 8
[2026-01-26 18:02:13] Checking for CVMFS
[2026-01-26 18:02:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:02:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:02:15] 2.13.3.0 10223 118502 261980 155564 2 897 34115316 40955372 53411 16776704 0 1292056559 99.706 1009226432 50759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 18:02:15] CVMFS is ok
[2026-01-26 18:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:02:15] Further information can be found at the LHC@home message board.
[2026-01-26 18:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:02:15] Checking for apptainer binary...
[2026-01-26 18:02:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:02:15] Running /usr/bin/apptainer --version
[2026-01-26 18:02:15] apptainer version 1.4.5-2.el9
[2026-01-26 18:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:02:16] c8-7-6.aglt2.org
[2026-01-26 18:02:16] apptainer works
[2026-01-26 18:02:16] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:02:16] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:02:16] Starting ATLAS job with PandaID=6983448898
[2026-01-26 18:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:38:49]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:38:49]  lfn=log.48298567._000010.job.log.tgz.1
[2026-01-26 19:38:49]  mtime=0
[2026-01-26 19:38:49]  protocol_id=None
[2026-01-26 19:38:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:38:49]  replicas=None
[2026-01-26 19:38:49]  scope=mc23_13p6TeV
[2026-01-26 19:38:49]  status=None
[2026-01-26 19:38:49]  status_code=0
[2026-01-26 19:38:49]  storage_token=
[2026-01-26 19:38:49]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6983448898/log.48298567._000010.job.log.tgz.1
[2026-01-26 19:38:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/09/log.48298567._000010.job.log.tgz.1
[2026-01-26 19:38:49]  workdir=None
[2026-01-26 19:38:49] ]
[2026-01-26 19:38:49] 2026-01-27 00:38:01,852 | INFO     | transferring file log.48298567._000010.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/log.48298567._000010.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 19:38:49] 2026-01-27 00:38:01,853 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/log.48298567._000010.job.log.tgz.1 /tmp/boinchome/slots/5/log.48298567._000010.job
[2026-01-26 19:38:49] 2026-01-27 00:38:01,932 | INFO     | adding to output.list: log.48298567._000010.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/09/log.48298567._000010.job.log.tg
[2026-01-26 19:38:49] 2026-01-27 00:38:01,933 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:38:49] 2026-01-27 00:38:01,933 | INFO     | summary of transferred files:
[2026-01-26 19:38:49] 2026-01-27 00:38:01,933 | INFO     |  -- lfn=log.48298567._000010.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:38:49] 2026-01-27 00:38:01,933 | INFO     | stage-out finished correctly
[2026-01-26 19:38:49] 2026-01-27 00:38:02,461 | INFO     | PID=1016004 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 19:38:49] 2026-01-27 00:38:02,461 | INFO     | .. there are 58 such processes running
[2026-01-26 19:38:49] 2026-01-27 00:38:02,612 | WARNING  | process 1034150 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 19:38:49] 2026-01-27 00:38:02,612 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:38:49] 2026-01-27 00:38:02,612 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:38:49] 2026-01-27 00:38:02,613 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 19:38:49] 2026-01-27 00:38:02,613 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 19:38:49] 2026-01-27 00:38:02,842 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:38:49] 2026-01-27 00:38:02,956 | INFO     | job 6983448898 has state=finished
[2026-01-26 19:38:49] 2026-01-27 00:38:02,956 | INFO     | preparing for final server update for job 6983448898 in state='finished'
[2026-01-26 19:38:49] 2026-01-27 00:38:02,956 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/jobReport.json
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | job 6983448898 has finished - writing final server update
[2026-01-26 19:38:49] 2026-01-27 00:38:02,958 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,002 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983448898/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,008 | INFO     | extracted standard info from prmon json
[2026-01-26 19:38:49] 2026-01-27 00:38:03,009 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:38:49] 2026-01-27 00:38:03,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:38:49] 2026-01-27 00:38:03,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:38:49] 2026-01-27 00:38:03,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:38:49] 2026-01-27 00:38:03,010 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:38:49] 2026-01-27 00:38:03,010 | INFO     | sum of square deviations: 183753534.95238084
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | sum of deviations: 3827049464.5238094
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | mean x: 1769471605.5238094
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | mean y: 2496704.988095238
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | intersect: -36850428938.945145
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | chi2: 0.08912845345878181
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | current memory leak: 20.83 B/s (using 84 data points, chi2=0.09)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,011 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | ..............................
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . Timing measurements:
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . get job = 0 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . initial setup = 49 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . payload setup = 61 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . stage-in = 0 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . payload execution = 5540 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . stage-out = 2 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | . log creation = 0 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,012 | INFO     | ..............................
[2026-01-26 19:38:49] 2026-01-27 00:38:03,123 | INFO     | 
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | job summary report
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | --------------------------------------------------
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | PanDA job id: 6983448898
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | task id: 48298567
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | errors: (none)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | pilot state: finished 
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | transexitcode: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | exeerrorcode: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | exeerrordiag: 
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | exitcode: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | exitmsg: OK
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | cpuconsumptiontime: 28999 s
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | nevents: 400
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | neventsw: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | pid: 1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | pgrp: 1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | corecount: 8
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | event service: False
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | sizes: {0: 2283267, 1: 2283952, 2: 2284413, 5606: 2311061, 5608: 2320059, 5609: 2320437}
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | --------------------------------------------------
[2026-01-26 19:38:49] 2026-01-27 00:38:03,124 | INFO     | 
[2026-01-26 19:38:49] 2026-01-27 00:38:03,125 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 19:38:49] 2026-01-27 00:38:03,214 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | job 6983448898 has completed (purged errors)
[2026-01-26 19:38:49] 2026-01-27 00:38:03,215 | INFO     | overall cleanup function is called
[2026-01-26 19:38:49] 2026-01-27 00:38:03,657 | INFO     | number of running child processes to parent process 1034150: 1
[2026-01-26 19:38:49] 2026-01-27 00:38:03,657 | INFO     | maximum number of monitored processes: 7
[2026-01-26 19:38:49] 2026-01-27 00:38:03,657 | INFO     | aborting job monitoring since job object (job id=6983448898) has expired
[2026-01-26 19:38:49] 2026-01-27 00:38:04,310 | INFO     | --- collectZombieJob: --- 10, [1034150]
[2026-01-26 19:38:49] 2026-01-27 00:38:04,310 | INFO     | zombie collector waiting for pid 1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:04,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:38:49] 2026-01-27 00:38:04,310 | INFO     | collected zombie processes
[2026-01-26 19:38:49] 2026-01-27 00:38:04,310 | INFO     | will attempt to kill all subprocesses of pid=1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:05,468 | INFO     | process IDs to be killed: [1034150] (in reverse order)
[2026-01-26 19:38:49] 2026-01-27 00:38:05,760 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:38:49] 2026-01-27 00:38:05,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:38:49] 2026-01-27 00:38:05,804 | INFO     | did not find any defunct processes belonging to 1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:05,834 | INFO     | did not find any defunct processes belonging to 1034150
[2026-01-26 19:38:49] 2026-01-27 00:38:05,835 | INFO     | ready for new job
[2026-01-26 19:38:49] 2026-01-27 00:38:05,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:38:49] 2026-01-27 00:38:05,851 | INFO     | **************************************
[2026-01-26 19:38:49] 2026-01-27 00:38:05,852 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:38:49] 2026-01-27 00:38:05,852 | INFO     | **************************************
[2026-01-26 19:38:49] 2026-01-27 00:38:05,852 | INFO     | 
[2026-01-26 19:38:49] 2026-01-27 00:38:05,856 | INFO     | architecture information:
[2026-01-26 19:38:49] 2026-01-27 00:38:05,857 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:38:49] 2026-01-27 00:38:05,901 | INFO     | cat /etc/os-release:
[2026-01-26 19:38:49] NAME="CentOS Linux"
[2026-01-26 19:38:49] VERSION="7 (Core)"
[2026-01-26 19:38:49] ID="centos"
[2026-01-26 19:38:49] ID_LIKE="rhel fedora"
[2026-01-26 19:38:49] VERSION_ID="7"
[2026-01-26 19:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:38:49] ANSI_COLOR="0;31"
[2026-01-26 19:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:38:49] HOME_URL="https://www.centos.org/"
[2026-01-26 19:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:38:49] 
[2026-01-26 19:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:38:49] 
[2026-01-26 19:38:49] 2026-01-27 00:38:05,901 | INFO     | **************************************
[2026-01-26 19:38:49] 2026-01-27 00:38:06,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 19:38:49] 2026-01-27 00:38:06,436 | INFO     | sufficient remaining disk space (168699101184 B)
[2026-01-26 19:38:49] 2026-01-27 00:38:06,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:38:49] 2026-01-27 00:38:06,442 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:38:49] 2026-01-27 00:38:06,442 | INFO     | update_server=False
[2026-01-26 19:38:49] 2026-01-27 00:38:06,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:38:49] 2026-01-27 00:38:07,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:38:49] 2026-01-27 00:38:07,170 | INFO     | aborting loop
[2026-01-26 19:38:49] 2026-01-27 00:38:07,231 | INFO     | all job control threads have been joined
[2026-01-26 19:38:49] 2026-01-27 00:38:07,443 | INFO     | all data control threads have been joined
[2026-01-26 19:38:49] 2026-01-27 00:38:07,448 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:07,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:38:49] 2026-01-27 00:38:07,730 | INFO     | [job] validate thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:07,814 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:07,902 | INFO     | all payload control threads have been joined
[2026-01-26 19:38:49] 2026-01-27 00:38:08,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:38:49] 2026-01-27 00:38:08,176 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,212 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,217 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,237 | INFO     | [job] control thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,383 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,449 | INFO     | [data] control thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,465 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,548 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,908 | INFO     | [payload] control thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:08,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:38:49] 2026-01-27 00:38:09,034 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:09,166 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:09,710 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:12,977 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:38:49] 2026-01-27 00:38:36,075 | INFO     | PID=1016004 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:38:49] 2026-01-27 00:38:36,075 | INFO     | .. there are 58 such processes running
[2026-01-26 19:38:49] 2026-01-27 00:38:36,076 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:38:49] 2026-01-27 00:38:36,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:38:49] 2026-01-27 00:38:36,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:38:49] 2026-01-27 00:38:39,910 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:38:49] 2026-01-27 00:38:41,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870018066240)>', '<ExcThread(monitor, started 139869300979456)>']
[2026-01-26 19:38:49] 2026-01-27 00:38:42,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:38:49] 2026-01-27 00:38:42,119 | INFO     | [monitor] control thread has ended
[2026-01-26 19:38:49] 2026-01-27 00:38:46,491 | INFO     | all workflow threads have been joined
[2026-01-26 19:38:49] 2026-01-27 00:38:46,491 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:38:49] 2026-01-27 00:38:46,491 | INFO     | traces error code: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:46,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:38:49] 2026-01-27 00:38:46,922 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:38:49] 2026-01-27 00:38:46,975 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:38:49] 2026-01-27 00:38:47,030 [wrapper] pilotpid: 1016004
[2026-01-26 19:38:49] 2026-01-27 00:38:47,073 [wrapper] Pilot exit status: 0
[2026-01-26 19:38:49] 2026-01-27 00:38:47,445 [wrapper] pandaids: 6983448898
[2026-01-26 19:38:49] 2026-01-27 00:38:48,165 [wrapper] cleanup supervisor_pilot 2144442 1016005
[2026-01-26 19:38:49] 2026-01-27 00:38:48,213 [wrapper] Test setup, not cleaning
[2026-01-26 19:38:49] 2026-01-27 00:38:48,265 [wrapper] apfmon messages muted
[2026-01-26 19:38:49] 2026-01-27 00:38:48,348 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:38:49] 2026-01-27 00:38:48,379 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:38:49]  *** Error codes and diagnostics ***
[2026-01-26 19:38:49]     "exeErrorCode": 0,
[2026-01-26 19:38:49]     "exeErrorDiag": "",
[2026-01-26 19:38:49]     "pilotErrorCode": 0,
[2026-01-26 19:38:49]     "pilotErrorDiag": "",
[2026-01-26 19:38:49]  *** Listing of results directory ***
[2026-01-26 19:38:49] total 410212
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 15:48 queuedata.json
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 19:38:49] -rwx------. 1 boincer umatlas     36322 Jan 25 15:48 runpilot2-wrapper.sh
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas       100 Jan 26 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:38:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 18:02 run_atlas
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas       105 Jan 26 18:02 job.xml
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas 247208165 Jan 26 18:02 EVNT.48298565._000001.pool.root.1
[2026-01-26 19:38:49] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 18:02 shared
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas    597763 Jan 26 18:02 input.tar.gz
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:02 start_atlas.sh
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas         0 Jan 26 18:02 boinc_lockfile
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas      2610 Jan 26 18:02 pandaJob.out
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas        57 Jan 26 18:02 setup.sh.local
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas   1006433 Jan 26 18:03 agis_schedconf.cvmfs.json
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas   1516246 Jan 26 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas       429 Jan 26 18:04 workernode_map.json
[2026-01-26 19:38:49] drwx------. 5 boincer umatlas      4096 Jan 26 18:04 pilot3
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas      7172 Jan 26 19:28 init_data.xml
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas 166736585 Jan 26 19:37 HITS.48298567._000010.pool.root.1
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas       530 Jan 26 19:37 boinc_task_state.xml
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas        95 Jan 26 19:37 pilot_heartbeat.json
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas      1048 Jan 26 19:37 memory_monitor_summary.json
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas    331524 Jan 26 19:38 log.48298567._000010.job.log.tgz.1
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas      6340 Jan 26 19:38 heartbeat.json
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas      4821 Jan 26 19:38 pilotlog.txt
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 19:38 boinc_mmap_file
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas        27 Jan 26 19:38 wrapper_checkpoint.txt
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas    755791 Jan 26 19:38 log.48298567._000010.job.log.1
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas       357 Jan 26 19:38 output.list
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas       620 Jan 26 19:38 runtime_log
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas   1105920 Jan 26 19:38 result.tar.gz
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas      9331 Jan 26 19:38 runtime_log.err
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas       655 Jan 26 19:38 gl0MDmADM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGG8KDmt8sHnn.diag
[2026-01-26 19:38:49] -rw-r--r--. 1 boincer umatlas     15336 Jan 26 19:38 stderr.txt
[2026-01-26 19:38:49] HITS file was successfully produced:
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas 166736585 Jan 26 19:37 shared/HITS.pool.root.1
[2026-01-26 19:38:49]  *** Contents of shared directory: ***
[2026-01-26 19:38:49] total 405936
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas 247208165 Jan 26 18:02 ATLAS.root_0
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas    597763 Jan 26 18:02 input.tar.gz
[2026-01-26 19:38:49] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:02 start_atlas.sh
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas 166736585 Jan 26 19:37 HITS.pool.root.1
[2026-01-26 19:38:49] -rw-------. 1 boincer umatlas   1105920 Jan 26 19:38 result.tar.gz
19:38:50 (1009087): run_atlas exited; CPU time 29222.616643
19:38:50 (1009087): called boinc_finish(0)

</stderr_txt>
]]>

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