Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-27 12:09:13 (10548): vboxwrapper version 26210
2026-01-27 12:09:13 (10548): BOINC client version: 8.0.2
2026-01-27 12:09:14 (10548): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-27 12:09:14 (10548): Successfully copied 'init_data.xml' to the shared directory.
2026-01-27 12:09:14 (10548): Create VM. (boinc_39bebf5792b2d378, slot#3)
2026-01-27 12:09:15 (10548): Setting Memory Size for VM. (4800MB)
2026-01-27 12:09:15 (10548): Setting CPU Count for VM. (8)
2026-01-27 12:09:15 (10548): Setting Chipset Options for VM.
2026-01-27 12:09:16 (10548): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-27 12:09:16 (10548): Setting Boot Options for VM.
2026-01-27 12:09:17 (10548): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-27 12:09:17 (10548): Enabling VM Network Access.
2026-01-27 12:09:17 (10548): Disabling USB Support for VM.
2026-01-27 12:09:18 (10548): Disabling COM Port Support for VM.
2026-01-27 12:09:18 (10548): Disabling LPT Port Support for VM.
2026-01-27 12:09:18 (10548): Disabling Audio Support for VM.
2026-01-27 12:09:18 (10548): Disabling Clipboard Support for VM.
2026-01-27 12:09:19 (10548): Disabling Drag and Drop Support for VM.
2026-01-27 12:09:19 (10548): Adding storage controller(s) to VM.
2026-01-27 12:09:19 (10548): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-27 12:09:20 (10548): Adding VirtualBox Guest Additions to VM.
2026-01-27 12:09:20 (10548): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-27 12:09:20 (10548): forwarding host port 64319 to guest port 80
2026-01-27 12:09:21 (10548): Enabling remote desktop for VM.
2026-01-27 12:09:21 (10548): Required extension pack not installed, remote desktop not enabled.
2026-01-27 12:09:21 (10548): Enabling shared directory for VM.
2026-01-27 12:09:21 (10548): Starting VM using VBoxManage interface. (boinc_39bebf5792b2d378, slot#3)
2026-01-27 12:09:30 (10548): Successfully started VM. (PID = '11216')
2026-01-27 12:09:30 (10548): Reporting VM Process ID to BOINC.
2026-01-27 12:09:30 (10548): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-27 12:09:30 (10548): Guest Log: CPUID EDX: 0x178bfbff
2026-01-27 12:09:30 (10548): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-27 12:09:30 (10548): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-27 12:09:30 (10548): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-27 12:09:30 (10548): Detected: Web Application Enabled (http://localhost:64319)
2026-01-27 12:09:30 (10548): Preference change detected
2026-01-27 12:09:30 (10548): Setting CPU throttle for VM. (90%)
2026-01-27 12:09:30 (10548): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 12:09:32 (10548): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-27 12:09:32 (10548): Guest Log: BIOS: Booting from Hard Disk...
2026-01-27 12:09:35 (10548): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-27 12:09:35 (10548): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-27 12:09:35 (10548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-27 12:09:46 (10548): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-27 12:09:46 (10548): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-27 12:09:59 (10548): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000316 main     Log opened 2026-01-27T12:09:58.342684000Z
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000546 main     OS Product: Linux
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000609 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000682 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000744 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000745 main     Process ID: 1374
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.000746 main     Package type: LINUX_64BITS_GENERIC
2026-01-27 12:09:59 (10548): Guest Log: 00:00:00.002541 main     5.2.32 r132073 started. Verbose level = 0
2026-01-27 12:10:00 (10548): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-27 12:10:00 (10548): Guest Log: [INFO] Mounting shared directory
2026-01-27 12:10:00 (10548): Guest Log: [INFO] Checking for init_data.xml
2026-01-27 12:10:09 (10548): Guest Log: 00:00:10.006187 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 589 184 862 000ns (GuestNow=1 769 476 209 162 612 000 ns GuestLast=1 769 515 798 347 474 000 ns fSetTimeLastLoop=true )
2026-01-27 12:10:11 (10548): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-27 12:10:11 (10548): Guest Log: [INFO] Detected branch: prod
2026-01-27 12:10:12 (10548): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-27 12:10:12 (10548): Guest Log: Copying input files
2026-01-27 12:10:21 (10548): Guest Log: Copied input files into RunAtlas.
2026-01-27 12:10:21 (10548): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-27 12:10:21 (10548): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-27 12:10:21 (10548): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-27 12:10:21 (10548): Guest Log: Further information can be found at the LHC@home message board.
2026-01-27 12:10:33 (10548): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-27 12:10:34 (10548): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-27 12:10:34 (10548): Guest Log: 2.6.3.0 1672 0 32188 155567 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-27 12:10:37 (10548): Guest Log: copied the webapp to /var/www
2026-01-27 12:10:37 (10548): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-27 12:10:37 (10548): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-27 12:10:37 (10548): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-27 12:10:37 (10548): Guest Log:  *** Starting ATLAS job. (PandaID=6983062061 taskID=48310724) ***
2026-01-27 13:49:33 (10548): Status Report: Elapsed Time: '6000.000000'
2026-01-27 13:49:33 (10548): Status Report: CPU Time: '36270.593750'
2026-01-27 15:29:36 (10548): Status Report: Elapsed Time: '12000.000000'
2026-01-27 15:29:36 (10548): Status Report: CPU Time: '78817.562500'
2026-01-27 16:05:58 (10548): Guest Log:  *** Job finished ***
2026-01-27 16:05:58 (10548): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:22,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:22,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:45,898 | INFO     | [monitor] cgroup control has ended
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:47,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572149028672)>', '<ExcThread(monitor, started 140571679102720)>']
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:47,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:47,274 | INFO     | [monitor] control thread has ended
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,064 | INFO     | all workflow threads have been joined
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,064 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,064 | INFO     | traces error code: 0
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,341 [wrapper] ==== pilot stdout END ====
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,352 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,363 [wrapper] pilotpid: 6117
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,373 [wrapper] Pilot exit status: 0
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,578 [wrapper] pandaids: 6983062061
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,632 [wrapper] cleanup supervisor_pilot 27767 6118
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,656 [wrapper] Test setup, not cleaning
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,666 [wrapper] apfmon messages muted
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,676 [wrapper] ==== wrapper stdout END ====
2026-01-27 16:05:58 (10548): Guest Log: 2026-01-27 05:05:52,685 [wrapper] ==== wrapper stderr END ====
2026-01-27 16:05:58 (10548): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 16:05:58 (10548): Guest Log:     "exeErrorCode": 0,
2026-01-27 16:05:58 (10548): Guest Log:     "exeErrorDiag": "",
2026-01-27 16:05:58 (10548): Guest Log:     "pilotErrorCode": 0,
2026-01-27 16:05:58 (10548): Guest Log:     "pilotErrorDiag": "",
2026-01-27 16:05:58 (10548): Guest Log:  *** Listing of results directory ***
2026-01-27 16:05:58 (10548): Guest Log: total 183592
2026-01-27 16:05:58 (10548): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 16:28 pilot3.tar.gz
2026-01-27 16:05:58 (10548): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 16:28 runpilot2-wrapper.sh
2026-01-27 16:05:58 (10548): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 16:28 queuedata.json
2026-01-27 16:05:58 (10548): Guest Log: -rwxr-xr-x. 1 atlas atlas      9121 Jan 27 01:10 init_data.xml
2026-01-27 16:05:58 (10548): Guest Log: -rwxr-xr-x. 1 atlas atlas    597758 Jan 27 01:10 input.tar.gz
2026-01-27 16:05:58 (10548): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 27 01:10 start_atlas.sh
2026-01-27 16:05:58 (10548): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 27 01:10 EVNT.48310721._000200.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 16:05:58 (10548): Guest Log: -rw-r--r--. 1 atlas atlas      2534 Jan 27 01:10 pandaJob.out
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas   1006441 Jan 27 01:12 agis_schedconf.cvmfs.json
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas       435 Jan 27 01:12 workernode_map.json
2026-01-27 16:05:58 (10548): Guest Log: drwx------. 5 atlas atlas      4096 Jan 27 01:12 pilot3
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas 179334021 Jan 27 05:03 HITS.48310724._009985.pool.root.1
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas      1042 Jan 27 05:04 memory_monitor_summary.json
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 05:04 agis_ddmendpoints.agis.ALL.json
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas    480480 Jan 27 05:04 log.48310724._009985.job.log.tgz.1
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas      6411 Jan 27 05:04 heartbeat.json
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 05:05 pilot_heartbeat.json
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 27 05:05 pilotlog.txt
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas   1913682 Jan 27 05:05 log.48310724._009985.job.log.1
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 05:05 output.list
2026-01-27 16:05:58 (10548): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 05:05 runtime_log
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas   2416640 Jan 27 05:05 result.tar.gz
2026-01-27 16:05:58 (10548): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Jan 27 05:05 runtime_log.err
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas       663 Jan 27 05:05 hGJKDmu9H48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwE1KDmSoHLxm.diag
2026-01-27 16:05:58 (10548): Guest Log: Looking for outputfile HITS.48310724._009985.pool.root.1
2026-01-27 16:05:58 (10548): Guest Log: HITS file was successfully produced
2026-01-27 16:05:58 (10548): Guest Log: -rw-------. 1 atlas atlas 179334021 Jan 27 05:03 /home/atlas/RunAtlas/HITS.48310724._009985.pool.root.1
2026-01-27 16:06:00 (10548): Guest Log: Successfully finished the ATLAS job!
2026-01-27 16:06:00 (10548): Guest Log: Copying the results back to the shared directory!
2026-01-27 16:06:00 (10548): Guest Log:  *** Contents of shared directory: ***
2026-01-27 16:06:00 (10548): Guest Log: total 664072
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root 497627498 Jan 27 01:09 ATLAS.root_0
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root 179334021 Jan 27 05:05 HITS.pool.root.1
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root      9121 Jan 27 01:09 init_data.xml
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root    597758 Jan 26 23:04 input.tar.gz
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root   2416640 Jan 27 05:05 result.tar.gz
2026-01-27 16:06:00 (10548): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 23:04 start_atlas.sh
2026-01-27 16:06:00 (10548): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 16:06:00 (10548): VM Completion File Detected.
2026-01-27 16:06:00 (10548): Powering off VM.
2026-01-27 16:06:01 (10548): Successfully stopped VM.
2026-01-27 16:06:01 (10548): Deregistering VM. (boinc_39bebf5792b2d378, slot#3)
2026-01-27 16:06:01 (10548): Removing network bandwidth throttle group from VM.
2026-01-27 16:06:01 (10548): Removing VM from VirtualBox.
2026-01-27 16:06:06 (10548): called boinc_finish(0)

</stderr_txt>
]]>

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