Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:26:06 (3551712): wrapper (7.7.26015): starting
21:26:06 (3551712): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 21:26:06] Arguments: --nthreads 9
[2026-01-26 21:26:06] Threads: 9
[2026-01-26 21:26:06] Checking for CVMFS
[2026-01-26 21:26:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:26:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:26:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:26:07] 2.13.3.0 11793 118728 365496 155569 3 402 30299367 32935937 33673 16776704 0 443242996 99.536 555141569 35226 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 21:26:07] CVMFS is ok
[2026-01-26 21:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 21:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 21:26:07] Further information can be found at the LHC@home message board.
[2026-01-26 21:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:26:07] Checking for apptainer binary...
[2026-01-26 21:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:26:07] Running /usr/bin/apptainer --version
[2026-01-26 21:26:07] apptainer version 1.4.5-2.el9
[2026-01-26 21:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:26:08] c6-2-11-2.aglt2.org
[2026-01-26 21:26:08] apptainer works
[2026-01-26 21:26:08] Set ATHENA_PROC_NUMBER=9
[2026-01-26 21:26:08] Set ATHENA_CORE_NUMBER=9
[2026-01-26 21:26:08] Starting ATLAS job with PandaID=6983772497
[2026-01-26 21:26:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:00:05 (3551712): BOINC client no longer exists - exiting
22:00:05 (3551712): timer handler: client dead, exiting
22:48:40 (3851918): wrapper (7.7.26015): starting
22:48:40 (3851918): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 22:48:40] Arguments: --nthreads 9
[2026-01-26 22:48:40] Threads: 9
[2026-01-26 22:48:40] This job has been restarted, cleaning up previous attempt
[2026-01-26 22:48:40] Checking for CVMFS
[2026-01-26 22:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:48:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:48:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:48:42] 2.13.3.0 11793 118811 369696 155571 0 342 31429566 32935931 32398 16776704 0 443650464 99.536 555451056 35225 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 22:48:42] CVMFS is ok
[2026-01-26 22:48:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:48:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:48:42] Further information can be found at the LHC@home message board.
[2026-01-26 22:48:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:48:42] Checking for apptainer binary...
[2026-01-26 22:48:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:48:42] Running /usr/bin/apptainer --version
[2026-01-26 22:48:42] apptainer version 1.4.5-2.el9
[2026-01-26 22:48:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:48:43] c6-2-11-2.aglt2.org
[2026-01-26 22:48:43] apptainer works
[2026-01-26 22:48:43] Set ATHENA_PROC_NUMBER=9
[2026-01-26 22:48:43] Set ATHENA_CORE_NUMBER=9
[2026-01-26 22:48:43] Starting ATLAS job with PandaID=6983772497
[2026-01-26 22:48:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 06:51:55]  *** The last 200 lines of the pilot log: ***
[2026-01-27 06:51:55] 2026-01-27 11:51:10,124 | INFO     | sum of square deviations: 30576869809.179775
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | sum of deviations: 83188584862.67319
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | mean x: 1769500565.6341991
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | mean y: 2543327.4004329005
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | intersect: -4811626628.106778
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | chi2: 0.15243402962203959
[2026-01-27 06:51:55] 2026-01-27 11:51:10,127 | INFO     | current chi2=0.15243402962203959 (change=79.63267336840163 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,128 | INFO     | sum of square deviations: 29594776671.58855
[2026-01-27 06:51:55] 2026-01-27 11:51:10,130 | INFO     | sum of deviations: 56626559317.43762
[2026-01-27 06:51:55] 2026-01-27 11:51:10,130 | INFO     | mean x: 1769500718.1356673
[2026-01-27 06:51:55] 2026-01-27 11:51:10,130 | INFO     | mean y: 2547447.089715536
[2026-01-27 06:51:55] 2026-01-27 11:51:10,131 | INFO     | intersect: -3383210063.08444
[2026-01-27 06:51:55] 2026-01-27 11:51:10,131 | INFO     | chi2: 0.05182252289608625
[2026-01-27 06:51:55] 2026-01-27 11:51:10,131 | INFO     | current chi2=0.05182252289608625 (change=66.00331105555613 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,131 | INFO     | sum of square deviations: 28633939746.495552
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | sum of deviations: 45864552515.38938
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | mean x: 1769500870.6371682
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | mean y: 2549150.6792035396
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | intersect: -2831757491.2245994
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | chi2: 0.034550238723696
[2026-01-27 06:51:55] 2026-01-27 11:51:10,134 | INFO     | current chi2=0.034550238723696 (change=33.32968602671926 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,135 | INFO     | sum of square deviations: 27694181979.946323
[2026-01-27 06:51:55] 2026-01-27 11:51:10,137 | INFO     | sum of deviations: 37934573677.44295
[2026-01-27 06:51:55] 2026-01-27 11:51:10,137 | INFO     | mean x: 1769501023.1342282
[2026-01-27 06:51:55] 2026-01-27 11:51:10,137 | INFO     | mean y: 2550434.8926174496
[2026-01-27 06:51:55] 2026-01-27 11:51:10,137 | INFO     | intersect: -2421253488.364702
[2026-01-27 06:51:55] 2026-01-27 11:51:10,137 | INFO     | chi2: 0.008470253265430147
[2026-01-27 06:51:55] 2026-01-27 11:51:10,138 | INFO     | current chi2=0.008470253265430147 (change=75.48424098262194 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,138 | INFO     | sum of square deviations: 26775187668.62442
[2026-01-27 06:51:55] 2026-01-27 11:51:10,140 | INFO     | sum of deviations: 33420230360.407227
[2026-01-27 06:51:55] 2026-01-27 11:51:10,140 | INFO     | mean x: 1769501175.6334841
[2026-01-27 06:51:55] 2026-01-27 11:51:10,140 | INFO     | mean y: 2551185.891402715
[2026-01-27 06:51:55] 2026-01-27 11:51:10,140 | INFO     | intersect: -2206103246.136361
[2026-01-27 06:51:55] 2026-01-27 11:51:10,141 | INFO     | chi2: 0.005278638320832686
[2026-01-27 06:51:55] 2026-01-27 11:51:10,141 | INFO     | current chi2=0.005278638320832686 (change=37.68027760897631 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,141 | INFO     | sum of square deviations: 25876778965.56525
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | sum of deviations: 29945711544.521748
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | mean x: 1769501328.1304348
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | mean y: 2551774.885583524
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | intersect: -2045190582.0884285
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | chi2: 0.00415882827328381
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | current chi2=0.00415882827328381 (change=21.213994585107887 %)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,144 | INFO     | left removable region: 70
[2026-01-27 06:51:55] 2026-01-27 11:51:10,145 | INFO     | sum of square deviations: 19255202060.171635
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | sum of deviations: 13391289684.590906
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | mean x: 1769502212.631313
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | mean y: 2554018.6136363638
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | intersect: -1228070134.4241672
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | chi2: 0.0014958812945203735
[2026-01-27 06:51:55] 2026-01-27 11:51:10,147 | INFO     | current memory leak: 0.70 B/s (using 396 data points, chi2=0.00)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | could have reported an average CPU frequency of 2698 MHz (19 samples)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | ..............................
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . Timing measurements:
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . get job = 0 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . initial setup = 3 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . payload setup = 48 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . stage-in = 0 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . payload execution = 28802 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . stage-out = 2 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | . log creation = 0 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,148 | INFO     | ..............................
[2026-01-27 06:51:55] 2026-01-27 11:51:10,157 | INFO     | time since job start (28873s) is within the limit (349056.0s)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | 
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | job summary report
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | --------------------------------------------------
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | PanDA job id: 6983772497
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | task id: 48317872
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | errors: (none)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | pilot state: finished 
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | transexitcode: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | exeerrorcode: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:10,254 | INFO     | exeerrordiag: 
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | exitcode: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | exitmsg: OK
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | cpuconsumptiontime: 41925 s
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | nevents: 400
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | neventsw: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | pid: 3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | pgrp: 3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | corecount: 9
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | event service: False
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | sizes: {0: 2283142, 1: 2283743, 2: 2283855, 3: 2243390, 4: 2284316, 5: 2284344, 15: 2284528, 28854: 2321573, 28856: 2330571, 28857: 2330821}
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | --------------------------------------------------
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | 
[2026-01-27 06:51:55] 2026-01-27 11:51:10,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,278 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,278 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 06:51:55] 2026-01-27 11:51:10,278 | INFO     | job 6983772497 has completed (purged errors)
[2026-01-27 06:51:55] 2026-01-27 11:51:10,278 | INFO     | overall cleanup function is called
[2026-01-27 06:51:55] 2026-01-27 11:51:11,287 | INFO     | --- collectZombieJob: --- 10, [3869355]
[2026-01-27 06:51:55] 2026-01-27 11:51:11,287 | INFO     | zombie collector waiting for pid 3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:11,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 06:51:55] 2026-01-27 11:51:11,288 | INFO     | collected zombie processes
[2026-01-27 06:51:55] 2026-01-27 11:51:11,288 | INFO     | will attempt to kill all subprocesses of pid=3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:11,678 | INFO     | process IDs to be killed: [3869355] (in reverse order)
[2026-01-27 06:51:55] 2026-01-27 11:51:11,801 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 06:51:55] 2026-01-27 11:51:11,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 06:51:55] 2026-01-27 11:51:11,818 | INFO     | did not find any defunct processes belonging to 3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:11,835 | INFO     | did not find any defunct processes belonging to 3869355
[2026-01-27 06:51:55] 2026-01-27 11:51:11,835 | INFO     | ready for new job
[2026-01-27 06:51:55] 2026-01-27 11:51:11,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 06:51:55] 2026-01-27 11:51:11,838 | INFO     | **************************************
[2026-01-27 06:51:55] 2026-01-27 11:51:11,840 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 06:51:55] 2026-01-27 11:51:11,840 | INFO     | **************************************
[2026-01-27 06:51:55] 2026-01-27 11:51:11,840 | INFO     | 
[2026-01-27 06:51:55] 2026-01-27 11:51:11,845 | INFO     | architecture information:
[2026-01-27 06:51:55] 2026-01-27 11:51:11,846 | INFO     | executing command: cat /etc/os-release
[2026-01-27 06:51:55] 2026-01-27 11:51:11,861 | INFO     | cat /etc/os-release:
[2026-01-27 06:51:55] NAME="CentOS Linux"
[2026-01-27 06:51:55] VERSION="7 (Core)"
[2026-01-27 06:51:55] ID="centos"
[2026-01-27 06:51:55] ID_LIKE="rhel fedora"
[2026-01-27 06:51:55] VERSION_ID="7"
[2026-01-27 06:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 06:51:55] ANSI_COLOR="0;31"
[2026-01-27 06:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 06:51:55] HOME_URL="https://www.centos.org/"
[2026-01-27 06:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 06:51:55] 
[2026-01-27 06:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 06:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 06:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 06:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 06:51:55] 
[2026-01-27 06:51:55] 2026-01-27 11:51:11,861 | INFO     | **************************************
[2026-01-27 06:51:55] 2026-01-27 11:51:12,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 06:51:55] 2026-01-27 11:51:12,382 | INFO     | sufficient remaining disk space (94929682432 B)
[2026-01-27 06:51:55] 2026-01-27 11:51:12,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 06:51:55] 2026-01-27 11:51:12,382 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 06:51:55] 2026-01-27 11:51:12,382 | INFO     | update_server=False
[2026-01-27 06:51:55] 2026-01-27 11:51:12,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 06:51:55] 2026-01-27 11:51:12,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 06:51:55] 2026-01-27 11:51:12,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 06:51:55] 2026-01-27 11:51:12,665 | INFO     | all data control threads have been joined
[2026-01-27 06:51:55] 2026-01-27 11:51:12,769 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 06:51:55] 2026-01-27 11:51:12,770 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 06:51:55] 2026-01-27 11:51:12,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:51:55] 2026-01-27 11:51:12,770 | INFO     | will abort loop
[2026-01-27 06:51:55] 2026-01-27 11:51:13,237 | INFO     | all payload control threads have been joined
[2026-01-27 06:51:55] 2026-01-27 11:51:13,387 | INFO     | [job] retrieve thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:13,419 | INFO     | [job] validate thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:13,530 | INFO     | all job control threads have been joined
[2026-01-27 06:51:55] 2026-01-27 11:51:13,670 | INFO     | [data] control thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:13,763 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:13,774 | INFO     | [job] job monitor thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,046 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,104 | INFO     | [data] copytool_in thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,242 | INFO     | [payload] control thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,256 | INFO     | [payload] validate_post thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,344 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,387 | INFO     | [data] copytool_out thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,536 | INFO     | [job] control thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:14,956 | INFO     | [payload] failed_post thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:15,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:51:55] 2026-01-27 11:51:16,212 | INFO     | [job] queue monitor thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:16,388 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:22,805 | INFO     | job.realtimelogging is not enabled
[2026-01-27 06:51:55] 2026-01-27 11:51:23,810 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 06:51:55] 2026-01-27 11:51:43,807 | INFO     | PID=3857480 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 06:51:55] 2026-01-27 11:51:43,808 | INFO     | .. there are 35 such processes running
[2026-01-27 06:51:55] 2026-01-27 11:51:43,808 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 06:51:55] 2026-01-27 11:51:43,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 06:51:55] 2026-01-27 11:51:43,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 06:51:55] 2026-01-27 11:51:49,302 | INFO     | [monitor] cgroup control has ended
[2026-01-27 06:51:55] 2026-01-27 11:51:49,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198247237440)>', '<ExcThread(monitor, started 140197899515648)>']
[2026-01-27 06:51:55] 2026-01-27 11:51:50,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 06:51:55] 2026-01-27 11:51:50,839 | INFO     | [monitor] control thread has ended
[2026-01-27 06:51:55] 2026-01-27 11:51:54,940 | INFO     | all workflow threads have been joined
[2026-01-27 06:51:55] 2026-01-27 11:51:54,940 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 06:51:55] 2026-01-27 11:51:54,941 | INFO     | traces error code: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:54,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 06:51:55] 2026-01-27 11:51:55,113 [wrapper] ==== pilot stdout END ====
[2026-01-27 06:51:55] 2026-01-27 11:51:55,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 06:51:55] 2026-01-27 11:51:55,118 [wrapper] pilotpid: 3857480
[2026-01-27 06:51:55] 2026-01-27 11:51:55,120 [wrapper] Pilot exit status: 0
[2026-01-27 06:51:55] 2026-01-27 11:51:55,130 [wrapper] pandaids: 6983772497 6983772497
[2026-01-27 06:51:55] 2026-01-27 11:51:55,208 [wrapper] cleanup supervisor_pilot 1198818 3857481
[2026-01-27 06:51:55] 2026-01-27 11:51:55,211 [wrapper] Test setup, not cleaning
[2026-01-27 06:51:55] 2026-01-27 11:51:55,213 [wrapper] apfmon messages muted
[2026-01-27 06:51:55] 2026-01-27 11:51:55,216 [wrapper] ==== wrapper stdout END ====
[2026-01-27 06:51:55] 2026-01-27 11:51:55,219 [wrapper] ==== wrapper stderr END ====
[2026-01-27 06:51:55]  *** Error codes and diagnostics ***
[2026-01-27 06:51:55]     "exeErrorCode": 0,
[2026-01-27 06:51:55]     "exeErrorDiag": "",
[2026-01-27 06:51:55]     "pilotErrorCode": 0,
[2026-01-27 06:51:55]     "pilotErrorDiag": "",
[2026-01-27 06:51:55]  *** Listing of results directory ***
[2026-01-27 06:51:55] total 1155176
[2026-01-27 06:51:55] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 22:16 pilot3.tar.gz
[2026-01-27 06:51:55] -rwx------. 1 boincer umatlas     36322 Jan 25 22:17 runpilot2-wrapper.sh
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 22:17 queuedata.json
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas       100 Jan 26 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 06:51:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 21:26 run_atlas
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas       105 Jan 26 21:26 job.xml
[2026-01-27 06:51:55] -rw-r--r--. 3 boincer umatlas 493341120 Jan 26 21:26 EVNT.48317869._000035.pool.root.1
[2026-01-27 06:51:55] -rw-r--r--. 3 boincer umatlas 493341120 Jan 26 21:26 ATLAS.root_0
[2026-01-27 06:51:55] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:26 start_atlas.sh
[2026-01-27 06:51:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 21:26 shared
[2026-01-27 06:51:55] -rw-r--r--. 2 boincer umatlas    597745 Jan 26 21:26 input.tar.gz
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas         0 Jan 26 21:26 boinc_lockfile
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas      2514 Jan 26 22:48 pandaJob.out
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas        57 Jan 26 22:48 setup.sh.local
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas   1006433 Jan 26 22:49 agis_schedconf.cvmfs.json
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas       442 Jan 26 22:49 workernode_map.json
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas      6877 Jan 27 06:49 init_data.xml
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas 184025173 Jan 27 06:50 HITS.48317872._001752.pool.root.1
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas       531 Jan 27 06:50 boinc_task_state.xml
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas        97 Jan 27 06:51 pilot_heartbeat.json
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas      1052 Jan 27 06:51 memory_monitor_summary.json
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas   1516246 Jan 27 06:51 agis_ddmendpoints.agis.ALL.json
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas    677586 Jan 27 06:51 log.48317872._001752.job.log.tgz.1
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas      6414 Jan 27 06:51 heartbeat.json
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 06:51 boinc_mmap_file
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas        28 Jan 27 06:51 wrapper_checkpoint.txt
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas      5078 Jan 27 06:51 pilotlog.txt
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas   3444384 Jan 27 06:51 log.48317872._001752.job.log.1
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas       357 Jan 27 06:51 output.list
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas       620 Jan 27 06:51 runtime_log
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas   4136960 Jan 27 06:51 result.tar.gz
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas      9432 Jan 27 06:51 runtime_log.err
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas       787 Jan 27 06:51 P5LODmlHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8I2KDmtK7UKo.diag
[2026-01-27 06:51:55] -rw-r--r--. 1 boincer umatlas     23420 Jan 27 06:51 stderr.txt
[2026-01-27 06:51:55] HITS file was successfully produced:
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas 184025173 Jan 27 06:50 shared/HITS.pool.root.1
[2026-01-27 06:51:55]  *** Contents of shared directory: ***
[2026-01-27 06:51:55] total 666144
[2026-01-27 06:51:55] -rw-r--r--. 3 boincer umatlas 493341120 Jan 26 21:26 ATLAS.root_0
[2026-01-27 06:51:55] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:26 start_atlas.sh
[2026-01-27 06:51:55] -rw-r--r--. 2 boincer umatlas    597745 Jan 26 21:26 input.tar.gz
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas 184025173 Jan 27 06:50 HITS.pool.root.1
[2026-01-27 06:51:55] -rw-------. 1 boincer umatlas   4136960 Jan 27 06:51 result.tar.gz
06:51:56 (3851918): run_atlas exited; CPU time 43372.312806
06:51:56 (3851918): called boinc_finish(0)

</stderr_txt>
]]>

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