Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 23:33:44 (7400): vboxwrapper version 26210
2026-01-26 23:33:44 (7400): BOINC client version: 8.2.8
2026-01-26 23:33:44 (7400): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-26 23:33:45 (7400): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 23:33:45 (7400): Create VM. (boinc_c2fc395679c0394a, slot#33)
2026-01-26 23:33:46 (7400): Setting Memory Size for VM. (4096MB)
2026-01-26 23:33:46 (7400): Setting CPU Count for VM. (1)
2026-01-26 23:33:46 (7400): Setting Chipset Options for VM.
2026-01-26 23:33:46 (7400): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 23:33:47 (7400): Setting Boot Options for VM.
2026-01-26 23:33:47 (7400): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 23:33:47 (7400): Enabling VM Network Access.
2026-01-26 23:33:48 (7400): Disabling USB Support for VM.
2026-01-26 23:33:48 (7400): Disabling COM Port Support for VM.
2026-01-26 23:33:48 (7400): Disabling LPT Port Support for VM.
2026-01-26 23:33:48 (7400): Disabling Audio Support for VM.
2026-01-26 23:33:49 (7400): Disabling Clipboard Support for VM.
2026-01-26 23:33:49 (7400): Disabling Drag and Drop Support for VM.
2026-01-26 23:33:49 (7400): Adding storage controller(s) to VM.
2026-01-26 23:33:50 (7400): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 23:33:50 (7400): Adding VirtualBox Guest Additions to VM.
2026-01-26 23:33:50 (7400): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 23:33:51 (7400): forwarding host port 49438 to guest port 80
2026-01-26 23:33:51 (7400): Enabling remote desktop for VM.
2026-01-26 23:33:51 (7400): Enabling shared directory for VM.
2026-01-26 23:33:52 (7400): Starting VM using VBoxManage interface. (boinc_c2fc395679c0394a, slot#33)
2026-01-26 23:33:56 (7400): Successfully started VM. (PID = '39092')
2026-01-26 23:33:56 (7400): Reporting VM Process ID to BOINC.
2026-01-26 23:33:56 (7400): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-26 23:33:56 (7400): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 23:33:56 (7400): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 23:33:56 (7400): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 23:33:56 (7400): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 23:33:56 (7400): Detected: Web Application Enabled (http://localhost:49438)
2026-01-26 23:33:56 (7400): Detected: Remote Desktop Enabled (localhost:49439)
2026-01-26 23:33:56 (7400): Preference change detected
2026-01-26 23:33:56 (7400): Setting CPU throttle for VM. (100%)
2026-01-26 23:33:56 (7400): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 23:33:58 (7400): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 23:33:58 (7400): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 23:34:00 (7400): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 23:34:00 (7400): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 23:34:00 (7400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 23:34:03 (7400): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 23:34:03 (7400): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 23:34:07 (7400): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000111 main     Log opened 2026-01-26T23:34:05.850460000Z
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000187 main     OS Product: Linux
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000207 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000216 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000216 main     Process ID: 1238
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000216 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 23:34:07 (7400): Guest Log: 00:00:00.000683 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 23:34:07 (7400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 23:34:07 (7400): Guest Log: [INFO] Mounting shared directory
2026-01-26 23:34:07 (7400): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 23:34:08 (7400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 23:34:08 (7400): Guest Log: [INFO] Detected branch: prod
2026-01-26 23:34:08 (7400): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 23:34:09 (7400): Guest Log: Copying input files
2026-01-26 23:34:10 (7400): Guest Log: Copied input files into RunAtlas.
2026-01-26 23:34:10 (7400): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-26 23:34:16 (7400): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 23:34:16 (7400): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 23:34:16 (7400): Guest Log: 2.6.3.0 1508 0 31544 155564 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-26 23:34:17 (7400): Guest Log: copied the webapp to /var/www
2026-01-26 23:34:17 (7400): Guest Log: core_number=1
2026-01-26 23:34:17 (7400): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 23:34:17 (7400): Guest Log:  *** Starting ATLAS job. (PandaID=6982021184 taskID=48310826) ***
2026-01-26 23:34:17 (7400): Guest Log: 00:00:10.010012 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 515 068 000ns (GuestNow=1 769 466 857 345 125 000 ns GuestLast=1 769 470 445 860 193 000 ns fSetTimeLastLoop=true )
2026-01-27 01:13:59 (7400): Status Report: Elapsed Time: '6000.000000'
2026-01-27 01:13:59 (7400): Status Report: CPU Time: '5924.234375'
2026-01-27 02:54:02 (7400): Status Report: Elapsed Time: '12000.000000'
2026-01-27 02:54:02 (7400): Status Report: CPU Time: '11897.250000'
2026-01-27 04:34:05 (7400): Status Report: Elapsed Time: '18000.000000'
2026-01-27 04:34:05 (7400): Status Report: CPU Time: '17869.875000'
2026-01-27 05:29:27 (7400): Guest Log:  *** Job finished ***
2026-01-27 05:29:27 (7400): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:01,877 | INFO     | all workflow threads have been joined
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:01,877 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:01,877 | INFO     | traces error code: 0
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:01,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,428 | INFO     | PID=5837 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,429 | INFO     | found 0 job(s) in 20 queues
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,429 | INFO     | [monitor] control thread has ended
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,536 [wrapper] ==== pilot stdout END ====
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,538 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,539 [wrapper] pilotpid: 5837
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,541 [wrapper] Pilot exit status: 0
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,575 [wrapper] pandaids: 6982021184
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,584 [wrapper] cleanup supervisor_pilot 29778 5838
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,585 [wrapper] Test setup, not cleaning
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,587 [wrapper] apfmon messages muted
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,588 [wrapper] ==== wrapper stdout END ====
2026-01-27 05:29:27 (7400): Guest Log: 2026-01-27 04:29:18,589 [wrapper] ==== wrapper stderr END ====
2026-01-27 05:29:27 (7400): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 05:29:27 (7400): Guest Log:     "exeErrorCode": 0,
2026-01-27 05:29:27 (7400): Guest Log:     "exeErrorDiag": "",
2026-01-27 05:29:27 (7400): Guest Log:     "pilotErrorCode": 0,
2026-01-27 05:29:27 (7400): Guest Log:     "pilotErrorDiag": "",
2026-01-27 05:29:27 (7400): Guest Log:  *** Listing of results directory ***
2026-01-27 05:29:27 (7400): Guest Log: total 187220
2026-01-27 05:29:27 (7400): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 24 21:55 runpilot2-wrapper.sh
2026-01-27 05:29:27 (7400): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 24 21:59 pilot3.tar.gz
2026-01-27 05:29:27 (7400): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 24 21:59 queuedata.json
2026-01-27 05:29:27 (7400): Guest Log: -rwxr-xr-x. 1 atlas atlas      9358 Jan 26 22:34 init_data.xml
2026-01-27 05:29:27 (7400): Guest Log: -rwxr-xr-x. 1 atlas atlas    597763 Jan 26 22:34 input.tar.gz
2026-01-27 05:29:27 (7400): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 22:34 start_atlas.sh
2026-01-27 05:29:27 (7400): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 22:34 EVNT.48310824._000050.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 05:29:27 (7400): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jan 26 22:34 pandaJob.out
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas        50 Jan 26 22:34 setup.sh.local
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas   1006433 Jan 26 22:34 agis_schedconf.cvmfs.json
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas       423 Jan 26 22:34 workernode_map.json
2026-01-27 05:29:27 (7400): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 22:34 pilot3
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas 180673549 Jan 27 04:28 HITS.48310826._006553.pool.root.1
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas      1038 Jan 27 04:28 memory_monitor_summary.json
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 04:28 agis_ddmendpoints.agis.ALL.json
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas    494632 Jan 27 04:28 log.48310826._006553.job.log.tgz.1
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas      6351 Jan 27 04:28 heartbeat.json
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 04:29 pilot_heartbeat.json
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas       744 Jan 27 04:29 pilotlog.txt
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas   3090590 Jan 27 04:29 log.48310826._006553.job.log.1
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 04:29 output.list
2026-01-27 05:29:27 (7400): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 04:29 runtime_log
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas   3604480 Jan 27 04:29 result.tar.gz
2026-01-27 05:29:27 (7400): Guest Log: -rw-r--r--. 1 atlas atlas      9114 Jan 27 04:29 runtime_log.err
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas       655 Jan 27 04:29 2aKODmmm038nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmv75KDmfpGkIn.diag
2026-01-27 05:29:27 (7400): Guest Log: Looking for outputfile HITS.48310826._006553.pool.root.1
2026-01-27 05:29:27 (7400): Guest Log: HITS file was successfully produced
2026-01-27 05:29:27 (7400): Guest Log: -rw-------. 1 atlas atlas 180673549 Jan 27 04:28 /home/atlas/RunAtlas/HITS.48310826._006553.pool.root.1
2026-01-27 05:29:28 (7400): Guest Log: Successfully finished the ATLAS job!
2026-01-27 05:29:28 (7400): Guest Log: Copying the results back to the shared directory!
2026-01-27 05:29:28 (7400): Guest Log:  *** Contents of shared directory: ***
2026-01-27 05:29:28 (7400): Guest Log: total 664320
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root 495355919 Jan 26 22:33 ATLAS.root_0
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root 180673549 Jan 27  2026 HITS.pool.root.1
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root      9358 Jan 26 22:33 init_data.xml
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root    597763 Jan 26 22:33 input.tar.gz
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root   3604480 Jan 27  2026 result.tar.gz
2026-01-27 05:29:28 (7400): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 22:33 start_atlas.sh
2026-01-27 05:29:28 (7400): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 05:29:28 (7400): VM Completion File Detected.
2026-01-27 05:29:28 (7400): Powering off VM.
2026-01-27 05:29:29 (7400): Successfully stopped VM.
2026-01-27 05:29:29 (7400): Deregistering VM. (boinc_c2fc395679c0394a, slot#33)
2026-01-27 05:29:29 (7400): Removing network bandwidth throttle group from VM.
2026-01-27 05:29:29 (7400): Removing VM from VirtualBox.
2026-01-27 05:29:35 (7400): called boinc_finish(0)

</stderr_txt>
]]>

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