Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:54:23 (424720): wrapper (7.7.26015): starting
06:54:23 (424720): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 06:54:23] Arguments: --nthreads 4
[2026-01-27 06:54:23] Threads: 4
[2026-01-27 06:54:23] Checking for CVMFS
[2026-01-27 06:54:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 06:54:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 06:54:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 06:54:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 06:54:24] 2.13.1.0 80484 1048 61740 155574 2 51 8567737 10240000 911 130560 0 877871 99.987 44498 435 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-27 06:54:24] CVMFS is ok
[2026-01-27 06:54:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 06:54:24] Checking for apptainer binary...
[2026-01-27 06:54:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 06:54:24] Running /usr/bin/apptainer --version
[2026-01-27 06:54:24] apptainer version 1.4.5
[2026-01-27 06:54:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 06:54:24] atlas6l1
[2026-01-27 06:54:24] apptainer works
[2026-01-27 06:54:24] Set ATHENA_PROC_NUMBER=4
[2026-01-27 06:54:24] Set ATHENA_CORE_NUMBER=4
[2026-01-27 06:54:24] Starting ATLAS job with PandaID=6984043259
[2026-01-27 06:54:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:36:50]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:36:50] 2026-01-27 07:35:57,910 | INFO     | total number of processed events: 400 (read)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,912 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6984043259/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,912 | INFO     | extracted standard info from prmon json
[2026-01-27 08:36:50] 2026-01-27 07:35:57,912 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:36:50] 2026-01-27 07:35:57,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:36:50] 2026-01-27 07:35:57,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:36:50] 2026-01-27 07:35:57,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:36:50] 2026-01-27 07:35:57,914 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | sum of square deviations: 310052325.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | sum of deviations: -4449772764.500001
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | mean x: 1769496313.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | mean y: 2336581.61
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | intersect: 25397587214.532864
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | chi2: 2.387105299658255
[2026-01-27 08:36:50] 2026-01-27 07:35:57,915 | INFO     | sum of square deviations: 265828240.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | sum of deviations: 1399365010.000001
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | mean x: 1769496161.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | mean y: 2355951.2210526317
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | intersect: -9312572413.924532
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | chi2: 1.7427040677553027
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | current chi2=1.7427040677553027 (change=26.995090329496847 %)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,916 | INFO     | sum of square deviations: 226022842.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | sum of deviations: 1385621069.4999971
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | mean x: 1769496008.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | mean y: 2355898.4111111113
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | intersect: -10845445698.340094
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | chi2: 1.7446510677639802
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | current chi2=1.7446510677639802 (change=-0.1117229278741092 %)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,917 | INFO     | right removable region: 89
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | sum of square deviations: 265828240.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | sum of deviations: -17518028983.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | mean x: 1769496466.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | mean y: 2380396.8736842107
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | intersect: 116611851146.49786
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | chi2: 0.8802047897281097
[2026-01-27 08:36:50] 2026-01-27 07:35:57,918 | INFO     | current chi2=0.8802047897281097 (change=63.126687798224815 %)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,919 | INFO     | sum of square deviations: 226022842.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,919 | INFO     | sum of deviations: -12657908791.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,919 | INFO     | mean x: 1769496618.5
[2026-01-27 08:36:50] 2026-01-27 07:35:57,919 | INFO     | mean y: 2361734.677777778
[2026-01-27 08:36:50] 2026-01-27 07:35:57,919 | INFO     | intersect: 99099101498.22922
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | chi2: 0.8478918880685249
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | current chi2=0.8478918880685249 (change=3.671066328730846 %)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | left removable region: 20
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | sum of square deviations: 101843770.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | sum of deviations: 327399200.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | mean x: 1769496588.0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | mean y: 2346629.579710145
[2026-01-27 08:36:50] 2026-01-27 07:35:57,920 | INFO     | intersect: -5686089367.182091
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | chi2: 0.0008954065926480226
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | current memory leak: 3.21 B/s (using 69 data points, chi2=0.00)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | ..............................
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | . Timing measurements:
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | . get job = 0 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | . initial setup = 3 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,921 | INFO     | . payload setup = 4 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,922 | INFO     | . stage-in = 0 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,922 | INFO     | . payload execution = 6060 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,922 | INFO     | . stage-out = 0 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,922 | INFO     | . log creation = 0 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,922 | INFO     | ..............................
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | 
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | job summary report
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | --------------------------------------------------
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | PanDA job id: 6984043259
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | task id: 48317911
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | errors: (none)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | pilot state: finished 
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | transexitcode: 0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | exeerrorcode: 0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | exeerrordiag: 
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | exitcode: 0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | exitmsg: OK
[2026-01-27 08:36:50] 2026-01-27 07:35:57,971 | INFO     | cpuconsumptiontime: 23114 s
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | nevents: 400
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | neventsw: 0
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | pid: 433184
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | pgrp: 433184
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | corecount: 4
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | event service: False
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | sizes: {0: 2283844, 1: 2284248, 11: 2284248, 6068: 2311070, 6070: 2320096, 6071: 2320152, 6072: 2320474}
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | --------------------------------------------------
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | 
[2026-01-27 08:36:50] 2026-01-27 07:35:57,972 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2026-01-27 08:36:50] 2026-01-27 07:35:57,986 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,986 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | job 6984043259 has completed (purged errors)
[2026-01-27 08:36:50] 2026-01-27 07:35:57,988 | INFO     | overall cleanup function is called
[2026-01-27 08:36:50] 2026-01-27 07:35:58,995 | INFO     | --- collectZombieJob: --- 10, [433184]
[2026-01-27 08:36:50] 2026-01-27 07:35:58,995 | INFO     | zombie collector waiting for pid 433184
[2026-01-27 08:36:50] 2026-01-27 07:35:58,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:36:50] 2026-01-27 07:35:58,996 | INFO     | collected zombie processes
[2026-01-27 08:36:50] 2026-01-27 07:35:58,996 | INFO     | will attempt to kill all subprocesses of pid=433184
[2026-01-27 08:36:50] 2026-01-27 07:35:59,130 | INFO     | process IDs to be killed: [433184] (in reverse order)
[2026-01-27 08:36:50] 2026-01-27 07:35:59,165 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:36:50] 2026-01-27 07:35:59,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:36:50] 2026-01-27 07:35:59,168 | INFO     | did not find any defunct processes belonging to 433184
[2026-01-27 08:36:50] 2026-01-27 07:35:59,171 | INFO     | did not find any defunct processes belonging to 433184
[2026-01-27 08:36:50] 2026-01-27 07:35:59,171 | INFO     | ready for new job
[2026-01-27 08:36:50] 2026-01-27 07:35:59,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:36:50] 2026-01-27 07:35:59,173 | INFO     | **************************************
[2026-01-27 08:36:50] 2026-01-27 07:35:59,173 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:36:50] 2026-01-27 07:35:59,173 | INFO     | **************************************
[2026-01-27 08:36:50] 2026-01-27 07:35:59,173 | INFO     | 
[2026-01-27 08:36:50] 2026-01-27 07:35:59,174 | INFO     | pilot is running in a VM
[2026-01-27 08:36:50] 2026-01-27 07:35:59,174 | INFO     | architecture information:
[2026-01-27 08:36:50] 2026-01-27 07:35:59,174 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:36:50] 2026-01-27 07:35:59,192 | INFO     | cat /etc/os-release:
[2026-01-27 08:36:50] NAME="CentOS Linux"
[2026-01-27 08:36:50] VERSION="7 (Core)"
[2026-01-27 08:36:50] ID="centos"
[2026-01-27 08:36:50] ID_LIKE="rhel fedora"
[2026-01-27 08:36:50] VERSION_ID="7"
[2026-01-27 08:36:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:36:50] ANSI_COLOR="0;31"
[2026-01-27 08:36:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:36:50] HOME_URL="https://www.centos.org/"
[2026-01-27 08:36:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:36:50] 
[2026-01-27 08:36:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:36:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:36:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:36:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:36:50] 
[2026-01-27 08:36:50] 2026-01-27 07:35:59,192 | INFO     | **************************************
[2026-01-27 08:36:50] 2026-01-27 07:35:59,695 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2026-01-27 08:36:50] 2026-01-27 07:35:59,712 | INFO     | sufficient remaining disk space (153915228160 B)
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | INFO     | update_server=False
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:36:50] 2026-01-27 07:35:59,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:36:50] 2026-01-27 07:35:59,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 08:36:50] 2026-01-27 07:35:59,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 08:36:50] 2026-01-27 07:35:59,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:36:50] 2026-01-27 07:35:59,823 | INFO     | will abort loop
[2026-01-27 08:36:50] 2026-01-27 07:36:00,678 | INFO     | all data control threads have been joined
[2026-01-27 08:36:50] 2026-01-27 07:36:00,714 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:00,718 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:00,726 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:00,776 | INFO     | all payload control threads have been joined
[2026-01-27 08:36:50] 2026-01-27 07:36:00,828 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:00,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,072 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,079 | INFO     | all job control threads have been joined
[2026-01-27 08:36:50] 2026-01-27 07:36:01,490 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,618 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,683 | INFO     | [data] control thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,719 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,732 | INFO     | [job] validate thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,781 | INFO     | [payload] control thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,925 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:01,981 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:02,084 | INFO     | [job] control thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:02,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:36:50] 2026-01-27 07:36:06,657 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:36:50] 2026-01-27 07:36:29,893 | INFO     | PID=428699 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 08:36:50] 2026-01-27 07:36:29,893 | INFO     | .. there are 2 such processes running
[2026-01-27 08:36:50] 2026-01-27 07:36:29,894 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:36:50] 2026-01-27 07:36:29,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:36:50] 2026-01-27 07:36:29,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:36:50] 2026-01-27 07:36:43,526 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:36:50] 2026-01-27 07:36:44,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132765142067008)>', '<ExcThread(monitor, started 132764787521280)>']
[2026-01-27 08:36:50] 2026-01-27 07:36:44,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:36:50] 2026-01-27 07:36:44,926 | INFO     | [monitor] control thread has ended
[2026-01-27 08:36:50] 2026-01-27 07:36:49,859 | INFO     | all workflow threads have been joined
[2026-01-27 08:36:50] 2026-01-27 07:36:49,859 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:36:50] 2026-01-27 07:36:49,859 | INFO     | traces error code: 0
[2026-01-27 08:36:50] 2026-01-27 07:36:49,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:36:50] 2026-01-27 07:36:49,923 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:36:50] 2026-01-27 07:36:49,928 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:36:50] 2026-01-27 07:36:49,933 [wrapper] pilotpid: 428699
[2026-01-27 08:36:50] 2026-01-27 07:36:49,938 [wrapper] Pilot exit status: 0
[2026-01-27 08:36:50] 2026-01-27 07:36:49,955 [wrapper] pandaids: 6984043259
[2026-01-27 08:36:50] 2026-01-27 07:36:49,986 [wrapper] cleanup supervisor_pilot  455208 428700
[2026-01-27 08:36:50] 2026-01-27 07:36:49,991 [wrapper] Test setup, not cleaning
[2026-01-27 08:36:50] 2026-01-27 07:36:49,998 [wrapper] apfmon messages muted
[2026-01-27 08:36:50] 2026-01-27 07:36:50,003 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:36:50] 2026-01-27 07:36:50,008 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:36:50]  *** Error codes and diagnostics ***
[2026-01-27 08:36:50]     "exeErrorCode": 0,
[2026-01-27 08:36:50]     "exeErrorDiag": "",
[2026-01-27 08:36:50]     "pilotErrorCode": 0,
[2026-01-27 08:36:50]     "pilotErrorDiag": "",
[2026-01-27 08:36:50]  *** Listing of results directory ***
[2026-01-27 08:36:50] insgesamt 725452
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 08:36:50] -rwx------ 1 yeti boinc     36322 Jan 26 06:14 runpilot2-wrapper.sh
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc      5111 Jan 26 06:15 queuedata.json
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc       100 Jan 27 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:36:50] -rwxr-xr-x 1 yeti boinc      7986 Jan 27 06:54 run_atlas
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc       105 Jan 27 06:54 job.xml
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc     15845 Jan 27 06:54 start_atlas.sh
[2026-01-27 08:36:50] drwxrwx--x 2 yeti boinc      4096 Jan 27 06:54 shared
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc    597757 Jan 27 06:54 input.tar.gz
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc      6594 Jan 27 06:54 init_data.xml
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc 530276790 Jan 27 06:54 EVNT.48317909._000016.pool.root.1
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc         0 Jan 27 06:54 boinc_setup_complete
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc         0 Jan 27 06:54 boinc_lockfile
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc      2498 Jan 27 06:54 pandaJob.out
[2026-01-27 08:36:50] -rw------- 1 yeti boinc   1004335 Jan 27 06:54 agis_schedconf.cvmfs.json
[2026-01-27 08:36:50] -rw------- 1 yeti boinc   1516246 Jan 27 06:54 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:36:50] -rw------- 1 yeti boinc       419 Jan 27 06:54 workernode_map.json
[2026-01-27 08:36:50] drwx------ 5 yeti boinc      4096 Jan 27 06:54 pilot3
[2026-01-27 08:36:50] -rw------- 1 yeti boinc 206198397 Jan 27 08:35 HITS.48317911._000608.pool.root.1
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc       530 Jan 27 08:35 boinc_task_state.xml
[2026-01-27 08:36:50] -rw------- 1 yeti boinc      1034 Jan 27 08:35 memory_monitor_summary.json
[2026-01-27 08:36:50] -rw------- 1 yeti boinc    317502 Jan 27 08:35 log.48317911._000608.job.log.tgz.1
[2026-01-27 08:36:50] -rw------- 1 yeti boinc      6302 Jan 27 08:35 heartbeat.json
[2026-01-27 08:36:50] -rw------- 1 yeti boinc        95 Jan 27 08:36 pilot_heartbeat.json
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc        27 Jan 27 08:36 wrapper_checkpoint.txt
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc      8192 Jan 27 08:36 boinc_mmap_file
[2026-01-27 08:36:50] -rw------- 1 yeti boinc      5081 Jan 27 08:36 pilotlog.txt
[2026-01-27 08:36:50] -rw------- 1 yeti boinc    902507 Jan 27 08:36 log.48317911._000608.job.log.1
[2026-01-27 08:36:50] -rw------- 1 yeti boinc       357 Jan 27 08:36 output.list
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc       620 Jan 27 08:36 runtime_log
[2026-01-27 08:36:50] -rw------- 1 yeti boinc   1239040 Jan 27 08:36 result.tar.gz
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc      9016 Jan 27 08:36 runtime_log.err
[2026-01-27 08:36:50] -rw------- 1 yeti boinc       639 Jan 27 08:36 gZ0MDmJ7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAY2KDmrBifZm.diag
[2026-01-27 08:36:50] -rw-r--r-- 1 yeti boinc     20725 Jan 27 08:36 stderr.txt
[2026-01-27 08:36:50] HITS file was successfully produced:
[2026-01-27 08:36:50] -rw------- 1 yeti boinc 206198397 Jan 27 08:35 shared/HITS.pool.root.1
[2026-01-27 08:36:50]  *** Contents of shared directory: ***
[2026-01-27 08:36:50] insgesamt 721040
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc     15845 Jan 27 06:54 start_atlas.sh
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc    597757 Jan 27 06:54 input.tar.gz
[2026-01-27 08:36:50] -rw-r--r-- 2 yeti boinc 530276790 Jan 27 06:54 ATLAS.root_0
[2026-01-27 08:36:50] -rw------- 1 yeti boinc 206198397 Jan 27 08:35 HITS.pool.root.1
[2026-01-27 08:36:50] -rw------- 1 yeti boinc   1239040 Jan 27 08:36 result.tar.gz
08:36:51 (424720): run_atlas exited; CPU time 23194.994501
08:36:51 (424720): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN