Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:48:47 (29651): wrapper (7.7.26015): starting
01:48:47 (29651): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 01:48:47] Arguments: --nthreads 8
[2026-01-27 01:48:47] Threads: 8
[2026-01-27 01:48:47] Checking for CVMFS
[2026-01-27 01:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:48:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:48:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:48:47] 2.11.0.0 4256 154730 110396 155567 1 186 2597634 4096001 174 130560 3 5966742 99.322 9559708 459 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-27 01:48:47] CVMFS is ok
[2026-01-27 01:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:48:47] Further information can be found at the LHC@home message board.
[2026-01-27 01:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:48:47] Checking for apptainer binary...
[2026-01-27 01:48:47] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-27 01:48:47] apptainer is not installed, using version from CVMFS
[2026-01-27 01:48:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:48:47] WARNING: Environment variable TMPDIR already has value [/tmp/job_11053385/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node198
[2026-01-27 01:48:47] apptainer works
[2026-01-27 01:48:47] Set ATHENA_PROC_NUMBER=8
[2026-01-27 01:48:47] Set ATHENA_CORE_NUMBER=8
[2026-01-27 01:48:47] Starting ATLAS job with PandaID=6983458289
[2026-01-27 01:48:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11053385/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 03:40:10]  *** The last 200 lines of the pilot log: ***
[2026-01-27 03:40:10] 2026-01-27 02:39:23,715 | INFO     | job 6983458289 has finished - writing final server update
[2026-01-27 03:40:10] 2026-01-27 02:39:23,715 | INFO     | total number of processed events: 400 (read)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | INFO     | using path: /tmp/job_11053385/atlas/pilot/slots/0/PanDA_Pilot-6983458289/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | INFO     | extracted standard info from prmon json
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 03:40:10] 2026-01-27 02:39:23,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 03:40:10] 2026-01-27 02:39:23,734 | INFO     | fitting pss+swap vs Time
[2026-01-27 03:40:10] 2026-01-27 02:39:23,734 | INFO     | sum of square deviations: 401533110.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | sum of deviations: 50498507668.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | mean x: 1769478243.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | mean y: 2403777.6972477064
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | intersect: -222534688175.92688
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | chi2: 6.334003326083667
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | sum of deviations: 47691517485.499985
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | mean x: 1769478090.5
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | mean y: 2395679.5865384615
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | intersect: -241960093663.41235
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | chi2: 6.368091687850587
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | current chi2=6.368091687850587 (change=-0.5381803578558749 %)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,735 | INFO     | right removable region: 103
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | sum of deviations: 12367385677.5
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | mean x: 1769478395.5
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | mean y: 2513993.971153846
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | intersect: -62743317943.580185
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | chi2: 0.8687113727842836
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | current chi2=0.8687113727842836 (change=86.2849555318846 %)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,736 | INFO     | sum of square deviations: 300842850.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | sum of deviations: -873190477.9999996
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | mean x: 1769478548.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | mean y: 2555375.9393939395
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | intersect: 5138432193.815788
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | chi2: 0.012364365124447078
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | current chi2=0.012364365124447078 (change=98.57670044253958 %)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | sum of square deviations: 257521107.5
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | sum of deviations: -779148608.0000001
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | mean x: 1769478700.5
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | mean y: 2555012.765957447
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | intersect: 5356239919.469088
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | chi2: 0.0119444270208451
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | current chi2=0.0119444270208451 (change=3.3963579963492614 %)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,737 | INFO     | left removable region: 30
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | sum of square deviations: 120605052.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | sum of deviations: 1143232171.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | mean x: 1769478975.0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | mean y: 2543034.7671232875
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | intersect: -16770595872.615503
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | chi2: 0.0005387919082780619
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | current memory leak: 9.48 B/s (using 73 data points, chi2=0.00)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | ..............................
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . Timing measurements:
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . get job = 0 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . initial setup = 2 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . payload setup = 2 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . stage-in = 0 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . payload execution = 6610 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . stage-out = 0 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | . log creation = 0 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,738 | INFO     | ..............................
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | 
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | job summary report
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | --------------------------------------------------
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | PanDA job id: 6983458289
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | task id: 48329801
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | errors: (none)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | pilot state: finished 
[2026-01-27 03:40:10] 2026-01-27 02:39:23,786 | INFO     | transexitcode: 0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | exeerrorcode: 0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | exeerrordiag: 
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | exitcode: 0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | exitmsg: OK
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | cpuconsumptiontime: 46927 s
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | nevents: 400
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | neventsw: 0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | pid: 5879
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | pgrp: 5879
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | corecount: 8
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | event service: False
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | sizes: {0: 2284510, 11: 2284510, 6615: 2311656, 6616: 2311655, 6617: 2320795, 6619: 2320933}
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | --------------------------------------------------
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | 
[2026-01-27 03:40:10] 2026-01-27 02:39:23,787 | INFO     | executing command: ls -lF /tmp/job_11053385/atlas/pilot/slots/0
[2026-01-27 03:40:10] 2026-01-27 02:39:23,796 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | job 6983458289 has completed (purged errors)
[2026-01-27 03:40:10] 2026-01-27 02:39:23,797 | INFO     | overall cleanup function is called
[2026-01-27 03:40:10] 2026-01-27 02:39:24,803 | INFO     | --- collectZombieJob: --- 10, [5879]
[2026-01-27 03:40:10] 2026-01-27 02:39:24,803 | INFO     | zombie collector waiting for pid 5879
[2026-01-27 03:40:10] 2026-01-27 02:39:24,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 03:40:10] 2026-01-27 02:39:24,803 | INFO     | collected zombie processes
[2026-01-27 03:40:10] 2026-01-27 02:39:24,803 | INFO     | will attempt to kill all subprocesses of pid=5879
[2026-01-27 03:40:10] 2026-01-27 02:39:24,898 | INFO     | process IDs to be killed: [5879] (in reverse order)
[2026-01-27 03:40:10] 2026-01-27 02:39:24,929 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 03:40:10] 2026-01-27 02:39:24,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 03:40:10] 2026-01-27 02:39:24,933 | INFO     | did not find any defunct processes belonging to 5879
[2026-01-27 03:40:10] 2026-01-27 02:39:24,936 | INFO     | did not find any defunct processes belonging to 5879
[2026-01-27 03:40:10] 2026-01-27 02:39:24,936 | INFO     | ready for new job
[2026-01-27 03:40:10] 2026-01-27 02:39:24,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 03:40:10] 2026-01-27 02:39:24,937 | INFO     | **************************************
[2026-01-27 03:40:10] 2026-01-27 02:39:24,937 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 03:40:10] 2026-01-27 02:39:24,937 | INFO     | **************************************
[2026-01-27 03:40:10] 2026-01-27 02:39:24,937 | INFO     | 
[2026-01-27 03:40:10] 2026-01-27 02:39:24,951 | INFO     | architecture information:
[2026-01-27 03:40:10] 2026-01-27 02:39:24,951 | INFO     | executing command: cat /etc/os-release
[2026-01-27 03:40:10] 2026-01-27 02:39:24,957 | INFO     | cat /etc/os-release:
[2026-01-27 03:40:10] NAME="CentOS Linux"
[2026-01-27 03:40:10] VERSION="7 (Core)"
[2026-01-27 03:40:10] ID="centos"
[2026-01-27 03:40:10] ID_LIKE="rhel fedora"
[2026-01-27 03:40:10] VERSION_ID="7"
[2026-01-27 03:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 03:40:10] ANSI_COLOR="0;31"
[2026-01-27 03:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 03:40:10] HOME_URL="https://www.centos.org/"
[2026-01-27 03:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 03:40:10] 
[2026-01-27 03:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 03:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 03:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 03:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 03:40:10] 
[2026-01-27 03:40:10] 2026-01-27 02:39:24,957 | INFO     | **************************************
[2026-01-27 03:40:10] 2026-01-27 02:39:25,460 | INFO     | executing command: df -mP /tmp/job_11053385/atlas/pilot/slots/0
[2026-01-27 03:40:10] 2026-01-27 02:39:25,466 | INFO     | sufficient remaining disk space (222090493952 B)
[2026-01-27 03:40:10] 2026-01-27 02:39:25,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 03:40:10] 2026-01-27 02:39:25,467 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 03:40:10] 2026-01-27 02:39:25,467 | INFO     | update_server=False
[2026-01-27 03:40:10] 2026-01-27 02:39:25,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 03:40:10] 2026-01-27 02:39:25,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:40:10] 2026-01-27 02:39:25,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 03:40:10] 2026-01-27 02:39:25,603 | INFO     | all payload control threads have been joined
[2026-01-27 03:40:10] 2026-01-27 02:39:25,679 | INFO     | all data control threads have been joined
[2026-01-27 03:40:10] 2026-01-27 02:39:25,682 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 03:40:10] 2026-01-27 02:39:25,682 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 03:40:10] 2026-01-27 02:39:25,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:40:10] 2026-01-27 02:39:25,682 | INFO     | will abort loop
[2026-01-27 03:40:10] 2026-01-27 02:39:25,845 | INFO     | all job control threads have been joined
[2026-01-27 03:40:10] 2026-01-27 02:39:26,471 | INFO     | [job] queue monitor thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,472 | INFO     | [job] retrieve thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,608 | INFO     | [payload] control thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,684 | INFO     | [data] control thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,687 | INFO     | [job] job monitor thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,790 | INFO     | [payload] validate_post thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:26,850 | INFO     | [job] control thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,070 | INFO     | [job] validate thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,338 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,468 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,472 | INFO     | [data] copytool_out thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,541 | INFO     | [data] copytool_in thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,588 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,778 | INFO     | [payload] failed_post thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:27,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 03:40:10] 2026-01-27 02:39:31,999 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 03:40:10] 2026-01-27 02:39:55,126 | INFO     | PID=1181 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 03:40:10] 2026-01-27 02:39:55,126 | INFO     | .. there are 2 such processes running
[2026-01-27 03:40:10] 2026-01-27 02:39:55,126 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 03:40:10] 2026-01-27 02:39:55,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 03:40:10] 2026-01-27 02:39:55,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 03:40:10] 2026-01-27 02:40:04,349 | INFO     | [monitor] cgroup control has ended
[2026-01-27 03:40:10] 2026-01-27 02:40:05,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065283840)>']
[2026-01-27 03:40:10] 2026-01-27 02:40:06,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 03:40:10] 2026-01-27 02:40:06,182 | INFO     | [monitor] control thread has ended
[2026-01-27 03:40:10] 2026-01-27 02:40:10,380 | INFO     | all workflow threads have been joined
[2026-01-27 03:40:10] 2026-01-27 02:40:10,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 03:40:10] 2026-01-27 02:40:10,380 | INFO     | traces error code: 0
[2026-01-27 03:40:10] 2026-01-27 02:40:10,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 03:40:10] 2026-01-27 02:40:10,431 [wrapper] ==== pilot stdout END ====
[2026-01-27 03:40:10] 2026-01-27 02:40:10,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 03:40:10] 2026-01-27 02:40:10,433 [wrapper] pilotpid: 1181
[2026-01-27 03:40:10] 2026-01-27 02:40:10,434 [wrapper] Pilot exit status: 0
[2026-01-27 03:40:10] 2026-01-27 02:40:10,438 [wrapper] pandaids: 6983458289
[2026-01-27 03:40:10] 2026-01-27 02:40:10,461 [wrapper] cleanup supervisor_pilot 27186 1182
[2026-01-27 03:40:10] 2026-01-27 02:40:10,462 [wrapper] Test setup, not cleaning
[2026-01-27 03:40:10] 2026-01-27 02:40:10,463 [wrapper] apfmon messages muted
[2026-01-27 03:40:10] 2026-01-27 02:40:10,464 [wrapper] ==== wrapper stdout END ====
[2026-01-27 03:40:10] 2026-01-27 02:40:10,465 [wrapper] ==== wrapper stderr END ====
[2026-01-27 03:40:10]  *** Error codes and diagnostics ***
[2026-01-27 03:40:10]     "exeErrorCode": 0,
[2026-01-27 03:40:10]     "exeErrorDiag": "",
[2026-01-27 03:40:10]     "pilotErrorCode": 0,
[2026-01-27 03:40:10]     "pilotErrorDiag": "",
[2026-01-27 03:40:10]  *** Listing of results directory ***
[2026-01-27 03:40:10] total 471132
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-27 03:40:10] -rwx------ 1 mf493845 unix-user     36322 Jan 25 21:52 runpilot2-wrapper.sh
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      5111 Jan 25 21:54 queuedata.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       100 Jan 27 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 03:40:10] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 27 00:39 run_atlas
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       105 Jan 27 00:39 job.xml
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user 272881683 Jan 27 01:48 EVNT.48329799._000002.pool.root.1
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 27 01:48 start_atlas.sh
[2026-01-27 03:40:10] drwxrwx--x 2 mf493845 unix-user       100 Jan 27 01:48 shared
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user    597786 Jan 27 01:48 input.tar.gz
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      6391 Jan 27 01:48 init_data.xml
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user         0 Jan 27 01:48 boinc_setup_complete
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      8192 Jan 27 01:48 boinc_mmap_file
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user         0 Jan 27 01:48 boinc_lockfile
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      2634 Jan 27 01:48 pandaJob.out
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user   1006441 Jan 27 01:48 agis_schedconf.cvmfs.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user   1516246 Jan 27 01:48 agis_ddmendpoints.agis.ALL.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       416 Jan 27 01:48 workernode_map.json
[2026-01-27 03:40:10] drwx------ 5 mf493845 unix-user       440 Jan 27 01:48 pilot3
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user 202918543 Jan 27 03:38 HITS.48329801._000038.pool.root.1
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      1020 Jan 27 03:39 memory_monitor_summary.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user        95 Jan 27 03:39 pilot_heartbeat.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user    352068 Jan 27 03:39 log.48329801._000038.job.log.tgz.1
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      6307 Jan 27 03:39 heartbeat.json
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      5016 Jan 27 03:40 pilotlog.txt
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user   1007622 Jan 27 03:40 log.48329801._000038.job.log.1
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       357 Jan 27 03:40 output.list
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       620 Jan 27 03:40 runtime_log
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user   1382400 Jan 27 03:40 result.tar.gz
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user      9219 Jan 27 03:40 runtime_log.err
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user       644 Jan 27 03:40 2g2LDmmGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfs1KDmHDP4Rn.diag
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user     21493 Jan 27 03:40 stderr.txt
[2026-01-27 03:40:10] HITS file was successfully produced:
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user 202918543 Jan 27 03:38 shared/HITS.pool.root.1
[2026-01-27 03:40:10]  *** Contents of shared directory: ***
[2026-01-27 03:40:10] total 466604
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user 272881683 Jan 27 01:48 ATLAS.root_0
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 27 01:48 start_atlas.sh
[2026-01-27 03:40:10] -rw-r--r-- 2 mf493845 unix-user    597786 Jan 27 01:48 input.tar.gz
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user 202918543 Jan 27 03:38 HITS.pool.root.1
[2026-01-27 03:40:10] -rw------- 1 mf493845 unix-user   1382400 Jan 27 03:40 result.tar.gz
03:40:12 (29651): run_atlas exited; CPU time 47020.373669
03:40:12 (29651): called boinc_finish(0)

</stderr_txt>
]]>

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