Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:01 (561478): wrapper (7.7.26015): starting
09:55:01 (561478): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 09:55:01] Arguments: --nthreads 3
[2026-01-27 09:55:01] Threads: 3
[2026-01-27 09:55:01] Checking for CVMFS
[2026-01-27 09:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 09:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 09:55:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 09:55:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 09:55:02] 2.9.2.0 3300999 9706 94060 155578 1 50 19013855 36864001 0 130560 0 4247111 99.986 317053 7086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 09:55:02] CVMFS is ok
[2026-01-27 09:55:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 09:55:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 09:55:02] Further information can be found at the LHC@home message board.
[2026-01-27 09:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 09:55:02] Checking for apptainer binary...
[2026-01-27 09:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 09:55:02] Running /usr/bin/apptainer --version
[2026-01-27 09:55:02] apptainer version 1.4.1-1.1
[2026-01-27 09:55:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 09:55:02] atlasA214
[2026-01-27 09:55:02] apptainer works
[2026-01-27 09:55:02] Set ATHENA_PROC_NUMBER=3
[2026-01-27 09:55:02] Set ATHENA_CORE_NUMBER=3
[2026-01-27 09:55:02] Starting ATLAS job with PandaID=6983773669
[2026-01-27 09:55:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 11:21:22]  *** The last 200 lines of the pilot log: ***
[2026-01-27 11:21:22]  is_altstaged=None
[2026-01-27 11:21:22]  is_tar=False
[2026-01-27 11:21:22]  lfn=log.48318034._002797.job.log.tgz.1
[2026-01-27 11:21:22]  mtime=0
[2026-01-27 11:21:22]  protocol_id=None
[2026-01-27 11:21:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 11:21:22]  replicas=None
[2026-01-27 11:21:22]  scope=mc23_13p6TeV
[2026-01-27 11:21:22]  status=None
[2026-01-27 11:21:22]  status_code=0
[2026-01-27 11:21:22]  storage_token=
[2026-01-27 11:21:22]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983773669/log.48318034._002797.job.log.tgz.1
[2026-01-27 11:21:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/91/log.48318034._002797.job.log.tgz.1
[2026-01-27 11:21:22]  workdir=None
[2026-01-27 11:21:22] ]
[2026-01-27 11:21:22] 2026-01-27 10:20:12,907 | INFO     | transferring file log.48318034._002797.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983773669/log.48318034._002797.job.log.tgz.1 to /local/data/boinc/
[2026-01-27 11:21:22] 2026-01-27 10:20:12,907 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983773669/log.48318034._002797.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0027
[2026-01-27 11:21:22] 2026-01-27 10:20:12,921 | INFO     | adding to output.list: log.48318034._002797.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/91/log.48318034._002797.job.log.tg
[2026-01-27 11:21:22] 2026-01-27 10:20:12,922 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 11:21:22] 2026-01-27 10:20:12,922 | INFO     | summary of transferred files:
[2026-01-27 11:21:22] 2026-01-27 10:20:12,922 | INFO     |  -- lfn=log.48318034._002797.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 11:21:22] 2026-01-27 10:20:12,922 | INFO     | stage-out finished correctly
[2026-01-27 11:21:22] 2026-01-27 10:20:14,318 | WARNING  | process 569962 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 11:21:22] 2026-01-27 10:20:14,318 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983773669/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 11:21:22] 2026-01-27 10:20:14,353 | INFO     | number of running child processes to parent process 569962: 1
[2026-01-27 11:21:22] 2026-01-27 10:20:14,354 | INFO     | maximum number of monitored processes: 6
[2026-01-27 11:21:22] 2026-01-27 10:20:14,570 | INFO     | time since job start (5104s) is within the limit (349056.0s)
[2026-01-27 11:21:22] 2026-01-27 10:20:14,675 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 11:21:22] 2026-01-27 10:20:15,639 | INFO     | job 6983773669 has state=finished
[2026-01-27 11:21:22] 2026-01-27 10:20:15,639 | INFO     | preparing for final server update for job 6983773669 in state='finished'
[2026-01-27 11:21:22] 2026-01-27 10:20:16,241 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,241 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983773669/jobReport.json
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | this job has now completed (state=finished)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | log transfer has been attempted: DONE
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | job 6983773669 has finished - writing final server update
[2026-01-27 11:21:22] 2026-01-27 10:20:16,243 | INFO     | total number of processed events: 400 (read)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,244 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983773669/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,244 | INFO     | extracted standard info from prmon json
[2026-01-27 11:21:22] 2026-01-27 10:20:16,244 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 11:21:22] 2026-01-27 10:20:16,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 11:21:22] 2026-01-27 10:20:16,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 11:21:22] 2026-01-27 10:20:16,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 11:21:22] 2026-01-27 10:20:16,245 | INFO     | fitting pss+swap vs Time
[2026-01-27 11:21:22] 2026-01-27 10:20:16,245 | INFO     | sum of square deviations: 141539398.0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | sum of deviations: -9517702754.0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | mean x: 1769506750.0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | mean y: 2425090.3896103897
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | intersect: 118991480474.78929
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | chi2: 0.11930652593021537
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | current memory leak: -67.24 B/s (using 77 data points, chi2=0.12)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | could have reported an average CPU frequency of 3564 MHz (6 samples)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | ..............................
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . Timing measurements:
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . get job = 0 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . initial setup = 3 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . payload setup = 2 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . stage-in = 0 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . payload execution = 5084 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . stage-out = 0 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | . log creation = 0 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,246 | INFO     | ..............................
[2026-01-27 11:21:22] 2026-01-27 10:20:16,576 | INFO     | time since job start (5106s) is within the limit (349056.0s)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,730 | INFO     | 
[2026-01-27 11:21:22] 2026-01-27 10:20:16,730 | INFO     | job summary report
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | --------------------------------------------------
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | PanDA job id: 6983773669
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | task id: 48318034
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | errors: (none)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | pilot state: finished 
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | transexitcode: 0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | exeerrorcode: 0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | exeerrordiag: 
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | exitcode: 0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | exitmsg: OK
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | cpuconsumptiontime: 14642 s
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | nevents: 400
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | neventsw: 0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | pid: 569962
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | pgrp: 569962
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | corecount: 3
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | event service: False
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | sizes: {0: 2284207, 11: 2284207, 5090: 2310670, 5091: 2319674, 5092: 2319730, 5094: 2319924}
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | --------------------------------------------------
[2026-01-27 11:21:22] 2026-01-27 10:20:16,731 | INFO     | 
[2026-01-27 11:21:22] 2026-01-27 10:20:16,732 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | job 6983773669 has completed (purged errors)
[2026-01-27 11:21:22] 2026-01-27 10:20:16,748 | INFO     | overall cleanup function is called
[2026-01-27 11:21:22] 2026-01-27 10:20:17,633 | INFO     | PID=565524 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 11:21:22] 2026-01-27 10:20:17,755 | INFO     | --- collectZombieJob: --- 10, [569962]
[2026-01-27 11:21:22] 2026-01-27 10:20:17,755 | INFO     | zombie collector waiting for pid 569962
[2026-01-27 11:21:22] 2026-01-27 10:20:17,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 11:21:22] 2026-01-27 10:20:17,755 | INFO     | collected zombie processes
[2026-01-27 11:21:22] 2026-01-27 10:20:17,755 | INFO     | will attempt to kill all subprocesses of pid=569962
[2026-01-27 11:21:22] 2026-01-27 10:20:17,795 | INFO     | process IDs to be killed: [569962] (in reverse order)
[2026-01-27 11:21:22] 2026-01-27 10:20:17,820 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 11:21:22] 2026-01-27 10:20:17,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 11:21:22] 2026-01-27 10:20:17,821 | INFO     | did not find any defunct processes belonging to 569962
[2026-01-27 11:21:22] 2026-01-27 10:20:17,822 | INFO     | did not find any defunct processes belonging to 569962
[2026-01-27 11:21:22] 2026-01-27 10:20:17,822 | INFO     | ready for new job
[2026-01-27 11:21:22] 2026-01-27 10:20:17,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | **************************************
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | **************************************
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | 
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | architecture information:
[2026-01-27 11:21:22] 2026-01-27 10:20:17,823 | INFO     | executing command: cat /etc/os-release
[2026-01-27 11:21:22] 2026-01-27 10:20:17,832 | INFO     | cat /etc/os-release:
[2026-01-27 11:21:22] NAME="CentOS Linux"
[2026-01-27 11:21:22] VERSION="7 (Core)"
[2026-01-27 11:21:22] ID="centos"
[2026-01-27 11:21:22] ID_LIKE="rhel fedora"
[2026-01-27 11:21:22] VERSION_ID="7"
[2026-01-27 11:21:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 11:21:22] ANSI_COLOR="0;31"
[2026-01-27 11:21:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 11:21:22] HOME_URL="https://www.centos.org/"
[2026-01-27 11:21:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 11:21:22] 
[2026-01-27 11:21:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 11:21:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 11:21:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 11:21:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 11:21:22] 
[2026-01-27 11:21:22] 2026-01-27 10:20:17,833 | INFO     | **************************************
[2026-01-27 11:21:22] 2026-01-27 10:20:18,336 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | INFO     | sufficient remaining disk space (239922577408 B)
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | INFO     | update_server=False
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 11:21:22] 2026-01-27 10:20:18,349 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 11:21:22] 2026-01-27 10:20:18,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 11:21:22] 2026-01-27 10:20:18,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:21:22] 2026-01-27 10:20:18,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 11:21:22] 2026-01-27 10:20:18,350 | INFO     | aborting loop
[2026-01-27 11:21:22] 2026-01-27 10:20:18,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 11:21:22] 2026-01-27 10:20:18,631 | INFO     | all job control threads have been joined
[2026-01-27 11:21:22] 2026-01-27 10:20:19,067 | INFO     | all payload control threads have been joined
[2026-01-27 11:21:22] 2026-01-27 10:20:19,127 | INFO     | all data control threads have been joined
[2026-01-27 11:21:22] 2026-01-27 10:20:19,355 | INFO     | [job] retrieve thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,355 | INFO     | [job] job monitor thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,359 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,363 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,561 | INFO     | [data] copytool_in thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,613 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:19,633 | INFO     | [job] control thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,047 | INFO     | [payload] validate_post thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,073 | INFO     | [payload] control thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,133 | INFO     | [data] control thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,409 | INFO     | [payload] failed_post thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,468 | INFO     | [data] copytool_out thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:20,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 11:21:22] 2026-01-27 10:20:20,792 | INFO     | [job] validate thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:21,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:21:22] 2026-01-27 10:20:22,293 | INFO     | [job] queue monitor thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:24,721 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:20:29,302 | INFO     | job.realtimelogging is not enabled
[2026-01-27 11:21:22] 2026-01-27 10:20:30,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 11:21:22] 2026-01-27 10:21:16,585 | INFO     | [monitor] cgroup control has ended
[2026-01-27 11:21:22] 2026-01-27 10:21:17,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205945214784)>', '<ExcThread(monitor, started 140205662418688)>']
[2026-01-27 11:21:22] 2026-01-27 10:21:17,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 11:21:22] 2026-01-27 10:21:17,650 | INFO     | [monitor] control thread has ended
[2026-01-27 11:21:22] 2026-01-27 10:21:22,616 | INFO     | all workflow threads have been joined
[2026-01-27 11:21:22] 2026-01-27 10:21:22,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 11:21:22] 2026-01-27 10:21:22,616 | INFO     | traces error code: 0
[2026-01-27 11:21:22] 2026-01-27 10:21:22,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 11:21:22] 2026-01-27 10:21:22,669 [wrapper] ==== pilot stdout END ====
[2026-01-27 11:21:22] 2026-01-27 10:21:22,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 11:21:22] 2026-01-27 10:21:22,674 [wrapper] pilotpid: 565524
[2026-01-27 11:21:22] 2026-01-27 10:21:22,677 [wrapper] Pilot exit status: 0
[2026-01-27 11:21:22] 2026-01-27 10:21:22,683 [wrapper] pandaids: 6983773669
[2026-01-27 11:21:22] 2026-01-27 10:21:22,700 [wrapper] cleanup supervisor_pilot  575001 565525
[2026-01-27 11:21:22] 2026-01-27 10:21:22,702 [wrapper] Test setup, not cleaning
[2026-01-27 11:21:22] 2026-01-27 10:21:22,704 [wrapper] apfmon messages muted
[2026-01-27 11:21:22] 2026-01-27 10:21:22,706 [wrapper] ==== wrapper stdout END ====
[2026-01-27 11:21:22] 2026-01-27 10:21:22,709 [wrapper] ==== wrapper stderr END ====
[2026-01-27 11:21:22]  *** Error codes and diagnostics ***
[2026-01-27 11:21:22]     "exeErrorCode": 0,
[2026-01-27 11:21:22]     "exeErrorDiag": "",
[2026-01-27 11:21:22]     "pilotErrorCode": 0,
[2026-01-27 11:21:22]     "pilotErrorDiag": "",
[2026-01-27 11:21:22]  *** Listing of results directory ***
[2026-01-27 11:21:22] total 666876
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 11:21:22] -rwx------ 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:22 queuedata.json
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc       100 Jan 27 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 11:21:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 09:55 run_atlas
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc       105 Jan 27 09:55 job.xml
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc 492574550 Jan 27 09:55 EVNT.48318032._000069.pool.root.1
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc    597761 Jan 27 09:55 input.tar.gz
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:55 start_atlas.sh
[2026-01-27 11:21:22] drwxrwx--x 2 boinc boinc      4096 Jan 27 09:55 shared
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc         0 Jan 27 09:55 boinc_setup_complete
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc      6443 Jan 27 09:55 init_data.xml
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc         0 Jan 27 09:55 boinc_lockfile
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc      2535 Jan 27 09:55 pandaJob.out
[2026-01-27 11:21:22] -rw------- 1 boinc boinc   1003573 Jan 27 09:55 agis_schedconf.cvmfs.json
[2026-01-27 11:21:22] -rw------- 1 boinc boinc   1516246 Jan 27 09:55 agis_ddmendpoints.agis.ALL.json
[2026-01-27 11:21:22] -rw------- 1 boinc boinc       430 Jan 27 09:55 workernode_map.json
[2026-01-27 11:21:22] drwx------ 5 boinc boinc      4096 Jan 27 09:55 pilot3
[2026-01-27 11:21:22] -rw------- 1 boinc boinc        95 Jan 27 11:19 pilot_heartbeat.json
[2026-01-27 11:21:22] -rw------- 1 boinc boinc 184287501 Jan 27 11:19 HITS.48318034._002797.pool.root.1
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc       530 Jan 27 11:20 boinc_task_state.xml
[2026-01-27 11:21:22] -rw------- 1 boinc boinc      1028 Jan 27 11:20 memory_monitor_summary.json
[2026-01-27 11:21:22] -rw------- 1 boinc boinc    294704 Jan 27 11:20 log.48318034._002797.job.log.tgz.1
[2026-01-27 11:21:22] -rw------- 1 boinc boinc      6319 Jan 27 11:20 heartbeat.json
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc      8192 Jan 27 11:21 boinc_mmap_file
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc        27 Jan 27 11:21 wrapper_checkpoint.txt
[2026-01-27 11:21:22] -rw------- 1 boinc boinc      4624 Jan 27 11:21 pilotlog.txt
[2026-01-27 11:21:22] -rw------- 1 boinc boinc    744936 Jan 27 11:21 log.48318034._002797.job.log.1
[2026-01-27 11:21:22] -rw------- 1 boinc boinc       357 Jan 27 11:21 output.list
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc       620 Jan 27 11:21 runtime_log
[2026-01-27 11:21:22] -rw------- 1 boinc boinc   1054720 Jan 27 11:21 result.tar.gz
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc      8911 Jan 27 11:21 runtime_log.err
[2026-01-27 11:21:22] -rw------- 1 boinc boinc       660 Jan 27 11:21 moFKDmGAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGh2KDmujVT9n.diag
[2026-01-27 11:21:22] -rw-r--r-- 1 boinc boinc     21503 Jan 27 11:21 stderr.txt
[2026-01-27 11:21:22] HITS file was successfully produced:
[2026-01-27 11:21:22] -rw------- 1 boinc boinc 184287501 Jan 27 11:19 shared/HITS.pool.root.1
[2026-01-27 11:21:22]  *** Contents of shared directory: ***
[2026-01-27 11:21:22] total 662644
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc 492574550 Jan 27 09:55 ATLAS.root_0
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc    597761 Jan 27 09:55 input.tar.gz
[2026-01-27 11:21:22] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:55 start_atlas.sh
[2026-01-27 11:21:22] -rw------- 1 boinc boinc 184287501 Jan 27 11:19 HITS.pool.root.1
[2026-01-27 11:21:22] -rw------- 1 boinc boinc   1054720 Jan 27 11:21 result.tar.gz
11:21:24 (561478): run_atlas exited; CPU time 14665.520901
11:21:24 (561478): called boinc_finish(0)

</stderr_txt>
]]>

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