Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:32:33 (4839): wrapper (7.7.26015): starting
17:32:33 (4839): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 17:32:33] Arguments: --nthreads 8
[2026-01-26 17:32:33] Threads: 8
[2026-01-26 17:32:33] Checking for CVMFS
[2026-01-26 17:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 17:32:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 17:32:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 17:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 17:32:33] 2.11.2.0 28294 206141 140268 155564 2 50 15796590 18432000 1833 130560 0 136396952 99.980 7835071 29689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 17:32:33] CVMFS is ok
[2026-01-26 17:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 17:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 17:32:33] Further information can be found at the LHC@home message board.
[2026-01-26 17:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 17:32:33] Checking for apptainer binary...
[2026-01-26 17:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 17:32:33] Running /usr/bin/apptainer --version
[2026-01-26 17:32:33] apptainer version 1.3.2-1.el7
[2026-01-26 17:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 17:32:34] c-206-25.aglt2.org
[2026-01-26 17:32:34] apptainer works
[2026-01-26 17:32:34] Set ATHENA_PROC_NUMBER=8
[2026-01-26 17:32:34] Set ATHENA_CORE_NUMBER=8
[2026-01-26 17:32:34] Starting ATLAS job with PandaID=6983771564
[2026-01-26 17:32:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:11:38 (15433): wrapper (7.7.26015): starting
20:11:38 (15433): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:11:38] Arguments: --nthreads 8
[2026-01-26 20:11:38] Threads: 8
[2026-01-26 20:11:38] This job has been restarted, cleaning up previous attempt
[2026-01-26 20:11:38] Checking for CVMFS
[2026-01-26 20:11:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:11:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:11:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:11:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:11:38] 2.11.2.0 28294 206300 139480 155567 3 11 15820668 18432001 1 130560 0 136554962 99.980 7839605 29689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 20:11:38] CVMFS is ok
[2026-01-26 20:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:11:38] Further information can be found at the LHC@home message board.
[2026-01-26 20:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:11:38] Checking for apptainer binary...
[2026-01-26 20:11:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:11:38] Running /usr/bin/apptainer --version
[2026-01-26 20:11:38] apptainer version 1.3.2-1.el7
[2026-01-26 20:11:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:11:39] c-206-25.aglt2.org
[2026-01-26 20:11:39] apptainer works
[2026-01-26 20:11:39] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:11:39] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:11:39] Starting ATLAS job with PandaID=6983771564
[2026-01-26 20:11:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:13:15]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:13:15] 2026-01-27 04:12:16,562 | INFO     | mean y: 2466613.4350282485
[2026-01-26 23:13:15] 2026-01-27 04:12:16,562 | INFO     | intersect: -28168631466.907677
[2026-01-26 23:13:15] 2026-01-27 04:12:16,562 | INFO     | chi2: 1.2445294059942429
[2026-01-26 23:13:15] 2026-01-27 04:12:16,563 | INFO     | sum of square deviations: 1577789583.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,563 | INFO     | sum of deviations: 26507686853.499996
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | mean x: 1769481549.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | mean y: 2465680.273255814
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | intersect: -29725746061.375664
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | chi2: 1.24494771822957
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | current chi2=1.24494771822957 (change=-0.033612081266411915 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,564 | INFO     | right removable region: 171
[2026-01-26 23:13:15] 2026-01-27 04:12:16,565 | INFO     | sum of square deviations: 1577789583.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,565 | INFO     | sum of deviations: 2714559139.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,565 | INFO     | mean x: 1769481854.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,566 | INFO     | mean y: 2492851.773255814
[2026-01-26 23:13:15] 2026-01-27 04:12:16,566 | INFO     | intersect: -3041869458.6809034
[2026-01-26 23:13:15] 2026-01-27 04:12:16,566 | INFO     | chi2: 0.003327037488705336
[2026-01-26 23:13:15] 2026-01-27 04:12:16,566 | INFO     | current chi2=0.003327037488705336 (change=99.73266702476609 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,566 | INFO     | sum of square deviations: 1444149868.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,567 | INFO     | sum of deviations: 1192215841.9999995
[2026-01-26 23:13:15] 2026-01-27 04:12:16,567 | INFO     | mean x: 1769482007.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,567 | INFO     | mean y: 2494583.119760479
[2026-01-26 23:13:15] 2026-01-27 04:12:16,567 | INFO     | intersect: -1458298737.3137624
[2026-01-26 23:13:15] 2026-01-27 04:12:16,568 | INFO     | chi2: 0.0009951001009874637
[2026-01-26 23:13:15] 2026-01-27 04:12:16,568 | INFO     | current chi2=0.0009951001009874637 (change=70.0905053109368 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,568 | INFO     | sum of square deviations: 1318277740.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | sum of deviations: 562201406.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | mean x: 1769482159.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | mean y: 2495344.0555555555
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | intersect: -752129670.2985857
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | chi2: 0.0005872269854743029
[2026-01-26 23:13:15] 2026-01-27 04:12:16,569 | INFO     | current chi2=0.0005872269854743029 (change=40.98814934381151 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,570 | INFO     | sum of square deviations: 1199940638.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,570 | INFO     | sum of deviations: 137704388.9999999
[2026-01-26 23:13:15] 2026-01-27 04:12:16,570 | INFO     | mean x: 1769482312.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,571 | INFO     | mean y: 2495890.27388535
[2026-01-26 23:13:15] 2026-01-27 04:12:16,571 | INFO     | intersect: -200568722.17760763
[2026-01-26 23:13:15] 2026-01-27 04:12:16,571 | INFO     | chi2: 0.00037575012722436093
[2026-01-26 23:13:15] 2026-01-27 04:12:16,571 | INFO     | current chi2=0.00037575012722436093 (change=36.01279632596112 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,571 | INFO     | sum of square deviations: 1088905998.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,572 | INFO     | sum of deviations: -89317999.49999999
[2026-01-26 23:13:15] 2026-01-27 04:12:16,572 | INFO     | mean x: 1769482464.5
[2026-01-26 23:13:15] 2026-01-27 04:12:16,572 | INFO     | mean y: 2496200.9802631577
[2026-01-26 23:13:15] 2026-01-27 04:12:16,572 | INFO     | intersect: 147638788.283258
[2026-01-26 23:13:15] 2026-01-27 04:12:16,573 | INFO     | chi2: 0.00029905609732719504
[2026-01-26 23:13:15] 2026-01-27 04:12:16,573 | INFO     | current chi2=0.00029905609732719504 (change=20.410912556091237 %)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,573 | INFO     | left removable region: 50
[2026-01-26 23:13:15] 2026-01-27 04:12:16,573 | INFO     | sum of square deviations: 549294020.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,573 | INFO     | sum of deviations: -237718463.99999982
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | mean x: 1769483044.0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | mean y: 2496180.4214876033
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | intersect: 768276938.9553673
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | chi2: 0.00022013465759411548
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | current memory leak: -0.43 B/s (using 121 data points, chi2=0.00)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,574 | INFO     | could have reported an average CPU frequency of 2172 MHz (10 samples)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | ..............................
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . Timing measurements:
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . get job = 0 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . initial setup = 1 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . payload setup = 6 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . stage-in = 0 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . payload execution = 10799 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . stage-out = 2 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,575 | INFO     | . log creation = 0 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,576 | INFO     | ..............................
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | 
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | job summary report
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | --------------------------------------------------
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | PanDA job id: 6983771564
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | task id: 48301086
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | errors: (none)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | pilot state: finished 
[2026-01-26 23:13:15] 2026-01-27 04:12:16,649 | INFO     | transexitcode: 0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | exeerrorcode: 0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | exeerrordiag: 
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | exitcode: 0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | exitmsg: OK
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | cpuconsumptiontime: 83052 s
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | nevents: 400
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | neventsw: 0
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | pid: 1207
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | pgrp: 1207
[2026-01-26 23:13:15] 2026-01-27 04:12:16,650 | INFO     | corecount: 8
[2026-01-26 23:13:15] 2026-01-27 04:12:16,651 | INFO     | event service: False
[2026-01-26 23:13:15] 2026-01-27 04:12:16,651 | INFO     | sizes: {0: 2284229, 11: 2284229, 10809: 2313196, 10810: 2313195, 10812: 2322563, 10814: 2322531}
[2026-01-26 23:13:15] 2026-01-27 04:12:16,651 | INFO     | --------------------------------------------------
[2026-01-26 23:13:15] 2026-01-27 04:12:16,651 | INFO     | 
[2026-01-26 23:13:15] 2026-01-27 04:12:16,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 23:13:15] 2026-01-27 04:12:16,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | job 6983771564 has completed (purged errors)
[2026-01-26 23:13:15] 2026-01-27 04:12:16,666 | INFO     | overall cleanup function is called
[2026-01-26 23:13:15] 2026-01-27 04:12:17,673 | INFO     | --- collectZombieJob: --- 10, [1207]
[2026-01-26 23:13:15] 2026-01-27 04:12:17,674 | INFO     | zombie collector waiting for pid 1207
[2026-01-26 23:13:15] 2026-01-27 04:12:17,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:13:15] 2026-01-27 04:12:17,674 | INFO     | collected zombie processes
[2026-01-26 23:13:15] 2026-01-27 04:12:17,674 | INFO     | will attempt to kill all subprocesses of pid=1207
[2026-01-26 23:13:15] 2026-01-27 04:12:17,795 | INFO     | process IDs to be killed: [1207] (in reverse order)
[2026-01-26 23:13:15] 2026-01-27 04:12:17,849 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:13:15] 2026-01-27 04:12:17,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:13:15] 2026-01-27 04:12:17,852 | INFO     | did not find any defunct processes belonging to 1207
[2026-01-26 23:13:15] 2026-01-27 04:12:17,855 | INFO     | did not find any defunct processes belonging to 1207
[2026-01-26 23:13:15] 2026-01-27 04:12:17,855 | INFO     | ready for new job
[2026-01-26 23:13:15] 2026-01-27 04:12:17,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:13:15] 2026-01-27 04:12:17,856 | INFO     | **************************************
[2026-01-26 23:13:15] 2026-01-27 04:12:17,856 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:13:15] 2026-01-27 04:12:17,856 | INFO     | **************************************
[2026-01-26 23:13:15] 2026-01-27 04:12:17,856 | INFO     | 
[2026-01-26 23:13:15] 2026-01-27 04:12:17,857 | INFO     | architecture information:
[2026-01-26 23:13:15] 2026-01-27 04:12:17,858 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:13:15] 2026-01-27 04:12:17,867 | INFO     | cat /etc/os-release:
[2026-01-26 23:13:15] NAME="CentOS Linux"
[2026-01-26 23:13:15] VERSION="7 (Core)"
[2026-01-26 23:13:15] ID="centos"
[2026-01-26 23:13:15] ID_LIKE="rhel fedora"
[2026-01-26 23:13:15] VERSION_ID="7"
[2026-01-26 23:13:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:13:15] ANSI_COLOR="0;31"
[2026-01-26 23:13:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:13:15] HOME_URL="https://www.centos.org/"
[2026-01-26 23:13:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:13:15] 
[2026-01-26 23:13:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:13:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:13:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:13:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:13:15] 
[2026-01-26 23:13:15] 2026-01-27 04:12:17,867 | INFO     | **************************************
[2026-01-26 23:13:15] 2026-01-27 04:12:18,369 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 23:13:15] 2026-01-27 04:12:18,379 | INFO     | sufficient remaining disk space (26538409984 B)
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | INFO     | update_server=False
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:13:15] 2026-01-27 04:12:18,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:13:15] 2026-01-27 04:12:18,721 | INFO     | all data control threads have been joined
[2026-01-26 23:13:15] 2026-01-27 04:12:18,723 | INFO     | all job control threads have been joined
[2026-01-26 23:13:15] 2026-01-27 04:12:19,168 | INFO     | all payload control threads have been joined
[2026-01-26 23:13:15] 2026-01-27 04:12:19,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:13:15] 2026-01-27 04:12:19,173 | INFO     | aborting loop
[2026-01-26 23:13:15] 2026-01-27 04:12:19,385 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,386 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,699 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,710 | INFO     | [job] validate thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,726 | INFO     | [data] control thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,726 | INFO     | [job] control thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,838 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:19,943 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,000 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,173 | INFO     | [payload] control thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,178 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,386 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,503 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,633 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:20,714 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:21,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:13:15] 2026-01-27 04:12:25,055 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:13:15] 2026-01-27 04:12:49,189 | INFO     | PID=26472 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 23:13:15] 2026-01-27 04:12:49,189 | INFO     | .. there are 3 such processes running
[2026-01-26 23:13:15] 2026-01-27 04:12:49,189 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:13:15] 2026-01-27 04:12:49,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:13:15] 2026-01-27 04:12:49,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:13:15] 2026-01-27 04:13:08,852 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:13:15] 2026-01-27 04:13:10,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711158048576)>', '<ExcThread(monitor, started 140710871279360)>']
[2026-01-26 23:13:15] 2026-01-27 04:13:11,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:13:15] 2026-01-27 04:13:11,290 | INFO     | [monitor] control thread has ended
[2026-01-26 23:13:15] 2026-01-27 04:13:15,410 | INFO     | all workflow threads have been joined
[2026-01-26 23:13:15] 2026-01-27 04:13:15,410 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:13:15] 2026-01-27 04:13:15,410 | INFO     | traces error code: 0
[2026-01-26 23:13:15] 2026-01-27 04:13:15,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:13:15] 2026-01-27 04:13:15,507 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:13:15] 2026-01-27 04:13:15,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:13:15] 2026-01-27 04:13:15,511 [wrapper] pilotpid: 26472
[2026-01-26 23:13:15] 2026-01-27 04:13:15,513 [wrapper] Pilot exit status: 0
[2026-01-26 23:13:15] 2026-01-27 04:13:15,525 [wrapper] pandaids: 6983771564 6983771564
[2026-01-26 23:13:15] 2026-01-27 04:13:15,554 [wrapper] cleanup supervisor_pilot 23244 26473
[2026-01-26 23:13:15] 2026-01-27 04:13:15,557 [wrapper] Test setup, not cleaning
[2026-01-26 23:13:15] 2026-01-27 04:13:15,559 [wrapper] apfmon messages muted
[2026-01-26 23:13:15] 2026-01-27 04:13:15,561 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:13:15] 2026-01-27 04:13:15,563 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:13:15]  *** Error codes and diagnostics ***
[2026-01-26 23:13:15]     "exeErrorCode": 0,
[2026-01-26 23:13:15]     "exeErrorDiag": "",
[2026-01-26 23:13:15]     "pilotErrorCode": 0,
[2026-01-26 23:13:15]     "pilotErrorDiag": "",
[2026-01-26 23:13:15]  *** Listing of results directory ***
[2026-01-26 23:13:15] total 1139800
[2026-01-26 23:13:15] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 23:13:15] -rwx------ 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas       100 Jan 26 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:13:15] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 17:32 run_atlas
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas       105 Jan 26 17:32 job.xml
[2026-01-26 23:13:15] -rw-r--r-- 3 boincer umatlas 487750952 Jan 26 17:32 EVNT.48301084._000008.pool.root.1
[2026-01-26 23:13:15] -rw-r--r-- 3 boincer umatlas 487750952 Jan 26 17:32 ATLAS.root_0
[2026-01-26 23:13:15] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 17:32 start_atlas.sh
[2026-01-26 23:13:15] drwxrwx--x 2 boincer umatlas      4096 Jan 26 17:32 shared
[2026-01-26 23:13:15] -rw-r--r-- 2 boincer umatlas    597764 Jan 26 17:32 input.tar.gz
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas         0 Jan 26 17:32 boinc_lockfile
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas      2514 Jan 26 20:11 pandaJob.out
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas        57 Jan 26 20:11 setup.sh.local
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas   1006441 Jan 26 20:11 agis_schedconf.cvmfs.json
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas       445 Jan 26 20:11 workernode_map.json
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 23:02 init_data.xml
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas       532 Jan 26 23:11 boinc_task_state.xml
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas 183798594 Jan 26 23:11 HITS.48301086._010859.pool.root.1
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas        96 Jan 26 23:11 pilot_heartbeat.json
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas      1058 Jan 26 23:12 memory_monitor_summary.json
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas   1516246 Jan 26 23:12 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas    423855 Jan 26 23:12 log.48301086._010859.job.log.tgz.1
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas      6413 Jan 26 23:12 heartbeat.json
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 23:13 boinc_mmap_file
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas        29 Jan 26 23:13 wrapper_checkpoint.txt
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas      4817 Jan 26 23:13 pilotlog.txt
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas   1529862 Jan 26 23:13 log.48301086._010859.job.log.1
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas       357 Jan 26 23:13 output.list
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas       620 Jan 26 23:13 runtime_log
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas   1976320 Jan 26 23:13 result.tar.gz
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas      9427 Jan 26 23:13 runtime_log.err
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas       787 Jan 26 23:13 l8UNDmIKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMg8KDmLSon3m.diag
[2026-01-26 23:13:15] -rw-r--r-- 1 boincer umatlas     23031 Jan 26 23:13 stderr.txt
[2026-01-26 23:13:15] HITS file was successfully produced:
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas 183798594 Jan 26 23:11 shared/HITS.pool.root.1
[2026-01-26 23:13:15]  *** Contents of shared directory: ***
[2026-01-26 23:13:15] total 658348
[2026-01-26 23:13:15] -rw-r--r-- 3 boincer umatlas 487750952 Jan 26 17:32 ATLAS.root_0
[2026-01-26 23:13:15] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 17:32 start_atlas.sh
[2026-01-26 23:13:15] -rw-r--r-- 2 boincer umatlas    597764 Jan 26 17:32 input.tar.gz
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas 183798594 Jan 26 23:11 HITS.pool.root.1
[2026-01-26 23:13:15] -rw------- 1 boincer umatlas   1976320 Jan 26 23:13 result.tar.gz
23:13:17 (15433): run_atlas exited; CPU time 83186.505032
23:13:17 (15433): called boinc_finish(0)

</stderr_txt>
]]>

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