Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:28 (227561): wrapper (7.7.26015): starting
00:03:28 (227561): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:03:28] Arguments: --nthreads 8
[2026-01-27 00:03:28] Threads: 8
[2026-01-27 00:03:28] Checking for CVMFS
[2026-01-27 00:03:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:31] 2.13.3.0 9292 47645 441228 155573 1 87 29577550 39288832 12465 16776704 0 59287015 99.521 110744354 34790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-27 00:03:31] CVMFS is ok
[2026-01-27 00:03:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:03:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:03:31] Further information can be found at the LHC@home message board.
[2026-01-27 00:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:31] Checking for apptainer binary...
[2026-01-27 00:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:31] Running /usr/bin/apptainer --version
[2026-01-27 00:03:31] apptainer version 1.4.5-2.el9
[2026-01-27 00:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:33] c-211-23.aglt2.org
[2026-01-27 00:03:33] apptainer works
[2026-01-27 00:03:33] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:03:33] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:03:33] Starting ATLAS job with PandaID=6983184482
[2026-01-27 00:03:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:05:00]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:05:00] 2026-01-27 18:04:19,811 | INFO     | extracted standard info from prmon json
[2026-01-27 13:05:00] 2026-01-27 18:04:19,812 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:05:00] 2026-01-27 18:04:19,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:05:00] 2026-01-27 18:04:19,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:05:00] 2026-01-27 18:04:19,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:05:00] 2026-01-27 18:04:19,924 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:05:00] 2026-01-27 18:04:19,926 | INFO     | sum of square deviations: 137192821814.33788
[2026-01-27 13:05:00] 2026-01-27 18:04:20,102 | INFO     | monitor loop #2543: job 0:6983184482 is in state 'finished'
[2026-01-27 13:05:00] 2026-01-27 18:04:20,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 13:05:00] 2026-01-27 18:04:20,129 | INFO     | sum of deviations: 816036964376.7603
[2026-01-27 13:05:00] 2026-01-27 18:04:20,129 | INFO     | mean x: 1769513809.2821522
[2026-01-27 13:05:00] 2026-01-27 18:04:20,129 | INFO     | mean y: 2471816.43832021
[2026-01-27 13:05:00] 2026-01-27 18:04:20,129 | INFO     | intersect: -10522777670.036308
[2026-01-27 13:05:00] 2026-01-27 18:04:20,131 | INFO     | chi2: 10.29718079840809
[2026-01-27 13:05:00] 2026-01-27 18:04:20,176 | INFO     | sum of square deviations: 134509874641.90216
[2026-01-27 13:05:00] 2026-01-27 18:04:20,445 | INFO     | sum of deviations: 959801905280.6316
[2026-01-27 13:05:00] 2026-01-27 18:04:20,445 | INFO     | mean x: 1769513656.7846763
[2026-01-27 13:05:00] 2026-01-27 18:04:20,446 | INFO     | mean y: 2479966.3474240424
[2026-01-27 13:05:00] 2026-01-27 18:04:20,446 | INFO     | intersect: -12623972803.18742
[2026-01-27 13:05:00] 2026-01-27 18:04:20,447 | INFO     | chi2: 8.129775058298266
[2026-01-27 13:05:00] 2026-01-27 18:04:20,447 | INFO     | current chi2=8.129775058298266 (change=21.048535347120428 %)
[2026-01-27 13:05:00] 2026-01-27 18:04:20,447 | INFO     | right removable region: 756
[2026-01-27 13:05:00] 2026-01-27 18:04:20,448 | INFO     | sum of square deviations: 134509696277.90211
[2026-01-27 13:05:00] 2026-01-27 18:04:20,720 | INFO     | sum of deviations: 555880673543.8158
[2026-01-27 13:05:00] 2026-01-27 18:04:20,720 | INFO     | mean x: 1769513961.7846763
[2026-01-27 13:05:00] 2026-01-27 18:04:20,721 | INFO     | mean y: 2486598.673712021
[2026-01-27 13:05:00] 2026-01-27 18:04:20,721 | INFO     | intersect: -7310284451.599253
[2026-01-27 13:05:00] 2026-01-27 18:04:20,722 | INFO     | chi2: 6.018566058233304
[2026-01-27 13:05:00] 2026-01-27 18:04:20,722 | INFO     | current chi2=6.018566058233304 (change=41.55132190003157 %)
[2026-01-27 13:05:00] 2026-01-27 18:04:20,772 | INFO     | sum of square deviations: 131861873181.10207
[2026-01-27 13:05:00] 2026-01-27 18:04:20,923 | INFO     | sum of deviations: 363618739087.32465
[2026-01-27 13:05:00] 2026-01-27 18:04:20,923 | INFO     | mean x: 1769514114.2845745
[2026-01-27 13:05:00] 2026-01-27 18:04:20,923 | INFO     | mean y: 2497669.545212766
[2026-01-27 13:05:00] 2026-01-27 18:04:20,924 | INFO     | intersect: -4877066646.590976
[2026-01-27 13:05:00] 2026-01-27 18:04:20,952 | INFO     | chi2: 3.791491323708574
[2026-01-27 13:05:00] 2026-01-27 18:04:20,952 | INFO     | current chi2=3.791491323708574 (change=37.003410994851954 %)
[2026-01-27 13:05:00] 2026-01-27 18:04:20,953 | INFO     | sum of square deviations: 129248981733.72939
[2026-01-27 13:05:00] 2026-01-27 18:04:21,176 | INFO     | sum of deviations: 252371619496.56888
[2026-01-27 13:05:00] 2026-01-27 18:04:21,176 | INFO     | mean x: 1769514266.78581
[2026-01-27 13:05:00] 2026-01-27 18:04:21,177 | INFO     | mean y: 2504156.03480589
[2026-01-27 13:05:00] 2026-01-27 18:04:21,177 | INFO     | intersect: -3452650192.113364
[2026-01-27 13:05:00] 2026-01-27 18:04:21,178 | INFO     | chi2: 3.0285913814119763
[2026-01-27 13:05:00] 2026-01-27 18:04:21,178 | INFO     | current chi2=3.0285913814119763 (change=20.121368537127015 %)
[2026-01-27 13:05:00] 2026-01-27 18:04:21,178 | INFO     | left removable region: 30
[2026-01-27 13:05:00] 2026-01-27 18:04:21,179 | INFO     | sum of square deviations: 118651985683.11444
[2026-01-27 13:05:00] 2026-01-27 18:04:21,403 | INFO     | sum of deviations: 215091914467.58133
[2026-01-27 13:05:00] 2026-01-27 18:04:21,404 | INFO     | mean x: 1769514541.2823691
[2026-01-27 13:05:00] 2026-01-27 18:04:21,404 | INFO     | mean y: 2523672.5922865015
[2026-01-27 13:05:00] 2026-01-27 18:04:21,404 | INFO     | intersect: -3205246245.217136
[2026-01-27 13:05:00] 2026-01-27 18:04:21,405 | INFO     | chi2: 0.17960003244121436
[2026-01-27 13:05:00] 2026-01-27 18:04:21,405 | INFO     | current memory leak: 1.81 B/s (using 726 data points, chi2=0.18)
[2026-01-27 13:05:00] 2026-01-27 18:04:21,455 | INFO     | could have reported an average CPU frequency of 2900 MHz (29 samples)
[2026-01-27 13:05:00] 2026-01-27 18:04:21,455 | INFO     | ..............................
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . Timing measurements:
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . get job = 2 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . initial setup = 73 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . payload setup = 77 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . stage-in = 1 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . payload execution = 46497 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,456 | INFO     | . stage-out = 7 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,457 | INFO     | . log creation = 1 s
[2026-01-27 13:05:00] 2026-01-27 18:04:21,457 | INFO     | ..............................
[2026-01-27 13:05:00] 2026-01-27 18:04:21,794 | INFO     | time since job start (46622s) is within the limit (349056.0s)
[2026-01-27 13:05:00] 2026-01-27 18:04:23,206 | INFO     | 
[2026-01-27 13:05:00] 2026-01-27 18:04:23,206 | INFO     | job summary report
[2026-01-27 13:05:00] 2026-01-27 18:04:23,206 | INFO     | --------------------------------------------------
[2026-01-27 13:05:00] 2026-01-27 18:04:23,206 | INFO     | PanDA job id: 6983184482
[2026-01-27 13:05:00] 2026-01-27 18:04:23,206 | INFO     | task id: 48310826
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | errors: (none)
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | pilot state: finished 
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | transexitcode: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | exeerrorcode: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | exeerrordiag: 
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | exitcode: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:23,207 | INFO     | exitmsg: OK
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | cpuconsumptiontime: 72096 s
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | nevents: 400
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | neventsw: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | pid: 250128
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | pgrp: 250128
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | corecount: 8
[2026-01-27 13:05:00] 2026-01-27 18:04:23,208 | INFO     | event service: False
[2026-01-27 13:05:00] 2026-01-27 18:04:23,209 | INFO     | sizes: {0: 2283702, 1: 2283758, 3: 2283786, 5: 2256811, 7: 2284303, 8: 2284331, 22: 2284487, 46580: 2329579, 46581: 2329578, 46589: 2338632, 46594: 2338688, 46599:
[2026-01-27 13:05:00] 2026-01-27 18:04:23,209 | INFO     | --------------------------------------------------
[2026-01-27 13:05:00] 2026-01-27 18:04:23,209 | INFO     | 
[2026-01-27 13:05:00] 2026-01-27 18:04:23,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-27 13:05:00] 2026-01-27 18:04:23,454 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,454 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,454 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,454 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,522 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:05:00] 2026-01-27 18:04:23,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,522 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:05:00] 2026-01-27 18:04:23,523 | INFO     | job 6983184482 has completed (purged errors)
[2026-01-27 13:05:00] 2026-01-27 18:04:23,523 | INFO     | overall cleanup function is called
[2026-01-27 13:05:00] 2026-01-27 18:04:24,597 | INFO     | --- collectZombieJob: --- 10, [250128]
[2026-01-27 13:05:00] 2026-01-27 18:04:24,597 | INFO     | zombie collector waiting for pid 250128
[2026-01-27 13:05:00] 2026-01-27 18:04:24,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:05:00] 2026-01-27 18:04:24,597 | INFO     | collected zombie processes
[2026-01-27 13:05:00] 2026-01-27 18:04:24,598 | INFO     | will attempt to kill all subprocesses of pid=250128
[2026-01-27 13:05:00] 2026-01-27 18:04:25,915 | INFO     | process IDs to be killed: [250128] (in reverse order)
[2026-01-27 13:05:00] 2026-01-27 18:04:26,304 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:05:00] 2026-01-27 18:04:26,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:05:00] 2026-01-27 18:04:26,600 | INFO     | did not find any defunct processes belonging to 250128
[2026-01-27 13:05:00] 2026-01-27 18:04:26,773 | INFO     | did not find any defunct processes belonging to 250128
[2026-01-27 13:05:00] 2026-01-27 18:04:26,773 | INFO     | ready for new job
[2026-01-27 13:05:00] 2026-01-27 18:04:26,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:05:00] 2026-01-27 18:04:26,810 | INFO     | **************************************
[2026-01-27 13:05:00] 2026-01-27 18:04:26,810 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:05:00] 2026-01-27 18:04:26,811 | INFO     | **************************************
[2026-01-27 13:05:00] 2026-01-27 18:04:26,811 | INFO     | 
[2026-01-27 13:05:00] 2026-01-27 18:04:26,813 | INFO     | architecture information:
[2026-01-27 13:05:00] 2026-01-27 18:04:26,831 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:05:00] 2026-01-27 18:04:26,921 | INFO     | cat /etc/os-release:
[2026-01-27 13:05:00] NAME="CentOS Linux"
[2026-01-27 13:05:00] VERSION="7 (Core)"
[2026-01-27 13:05:00] ID="centos"
[2026-01-27 13:05:00] ID_LIKE="rhel fedora"
[2026-01-27 13:05:00] VERSION_ID="7"
[2026-01-27 13:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:05:00] ANSI_COLOR="0;31"
[2026-01-27 13:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:05:00] HOME_URL="https://www.centos.org/"
[2026-01-27 13:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:05:00] 
[2026-01-27 13:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:05:00] 
[2026-01-27 13:05:00] 2026-01-27 18:04:26,921 | INFO     | **************************************
[2026-01-27 13:05:00] 2026-01-27 18:04:27,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-27 13:05:00] 2026-01-27 18:04:27,543 | INFO     | sufficient remaining disk space (52075429888 B)
[2026-01-27 13:05:00] 2026-01-27 18:04:27,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:05:00] 2026-01-27 18:04:27,544 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:05:00] 2026-01-27 18:04:27,544 | INFO     | update_server=False
[2026-01-27 13:05:00] 2026-01-27 18:04:27,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:05:00] 2026-01-27 18:04:27,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:05:00] 2026-01-27 18:04:27,849 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 13:05:00] 2026-01-27 18:04:27,849 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 13:05:00] 2026-01-27 18:04:27,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:05:00] 2026-01-27 18:04:27,849 | INFO     | will abort loop
[2026-01-27 13:05:00] 2026-01-27 18:04:27,899 | INFO     | all data control threads have been joined
[2026-01-27 13:05:00] 2026-01-27 18:04:27,906 | INFO     | all job control threads have been joined
[2026-01-27 13:05:00] 2026-01-27 18:04:28,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:05:00] 2026-01-27 18:04:28,562 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:28,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:05:00] 2026-01-27 18:04:28,726 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:28,855 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:28,905 | INFO     | [data] control thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:28,915 | INFO     | [job] control thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,010 | INFO     | all payload control threads have been joined
[2026-01-27 13:05:00] 2026-01-27 18:04:29,047 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,072 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,101 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,173 | INFO     | [job] validate thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,214 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,365 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,371 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,411 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:29,552 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:30,017 | INFO     | [payload] control thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:32,693 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:05:00] 2026-01-27 18:04:46,738 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:05:00] 2026-01-27 18:04:48,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274967365440)>', '<ExcThread(monitor, started 140274412013312)>']
[2026-01-27 13:05:00] 2026-01-27 18:04:53,498 | INFO     | all workflow threads have been joined
[2026-01-27 13:05:00] 2026-01-27 18:04:53,502 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:05:00] 2026-01-27 18:04:53,502 | INFO     | traces error code: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:53,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:05:00] 2026-01-27 18:04:57,919 | INFO     | PID=236921 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 13:05:00] 2026-01-27 18:04:57,919 | INFO     | .. there are 9 such processes running
[2026-01-27 13:05:00] 2026-01-27 18:04:57,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:05:00] 2026-01-27 18:04:57,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:05:00] 2026-01-27 18:04:57,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:05:00] 2026-01-27 18:04:57,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:05:00] 2026-01-27 18:04:57,978 | INFO     | [monitor] control thread has ended
[2026-01-27 13:05:00] 2026-01-27 18:04:58,598 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:05:00] 2026-01-27 18:04:58,680 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:05:00] 2026-01-27 18:04:58,749 [wrapper] pilotpid: 236921
[2026-01-27 13:05:00] 2026-01-27 18:04:58,805 [wrapper] Pilot exit status: 0
[2026-01-27 13:05:00] 2026-01-27 18:04:58,921 [wrapper] pandaids: 6983184482
[2026-01-27 13:05:00] 2026-01-27 18:04:59,155 [wrapper] cleanup supervisor_pilot 2961762 236922
[2026-01-27 13:05:00] 2026-01-27 18:04:59,185 [wrapper] Test setup, not cleaning
[2026-01-27 13:05:00] 2026-01-27 18:04:59,204 [wrapper] apfmon messages muted
[2026-01-27 13:05:00] 2026-01-27 18:04:59,222 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:05:00] 2026-01-27 18:04:59,240 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:05:00]  *** Error codes and diagnostics ***
[2026-01-27 13:05:00]     "exeErrorCode": 0,
[2026-01-27 13:05:00]     "exeErrorDiag": "",
[2026-01-27 13:05:00]     "pilotErrorCode": 0,
[2026-01-27 13:05:00]     "pilotErrorDiag": "",
[2026-01-27 13:05:00]  *** Listing of results directory ***
[2026-01-27 13:05:00] total 682112
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-27 13:05:00] -rwx------. 1 boincer umatlas     36322 Jan 25 11:29 runpilot2-wrapper.sh
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:30 queuedata.json
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:05:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:03 run_atlas
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:03 job.xml
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas 500249266 Jan 27 00:03 EVNT.48310824._000133.pool.root.1
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 13:05:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:03 shared
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas    597767 Jan 27 00:03 input.tar.gz
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:03 boinc_lockfile
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas      2523 Jan 27 00:03 pandaJob.out
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas        57 Jan 27 00:03 setup.sh.local
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas       442 Jan 27 00:07 workernode_map.json
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:07 agis_schedconf.cvmfs.json
[2026-01-27 13:05:00] drwx------. 5 boincer umatlas      4096 Jan 27 00:07 pilot3
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas 181635060 Jan 27 13:01 HITS.48310826._010445.pool.root.1
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas       532 Jan 27 13:01 boinc_task_state.xml
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas      6525 Jan 27 13:01 init_data.xml
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas      1041 Jan 27 13:03 memory_monitor_summary.json
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas   1516246 Jan 27 13:04 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas    875320 Jan 27 13:04 log.48310826._010445.job.log.tgz.1
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas      6386 Jan 27 13:04 heartbeat.json
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 13:04 boinc_mmap_file
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas        28 Jan 27 13:04 wrapper_checkpoint.txt
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas        95 Jan 27 13:04 pilot_heartbeat.json
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas       821 Jan 27 13:04 pilotlog.txt
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas   5451535 Jan 27 13:04 log.48310826._010445.job.log.1
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas       357 Jan 27 13:04 output.list
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas       620 Jan 27 13:05 runtime_log
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas   6348800 Jan 27 13:05 result.tar.gz
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas      9342 Jan 27 13:05 runtime_log.err
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas       658 Jan 27 13:05 8SSLDmfAI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUv7KDmb7skRm.diag
[2026-01-27 13:05:00] -rw-r--r--. 1 boincer umatlas     21178 Jan 27 13:05 stderr.txt
[2026-01-27 13:05:00] HITS file was successfully produced:
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas 181635060 Jan 27 13:01 shared/HITS.pool.root.1
[2026-01-27 13:05:00]  *** Contents of shared directory: ***
[2026-01-27 13:05:00] total 672716
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas 500249266 Jan 27 00:03 ATLAS.root_0
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 13:05:00] -rw-r--r--. 2 boincer umatlas    597767 Jan 27 00:03 input.tar.gz
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas 181635060 Jan 27 13:01 HITS.pool.root.1
[2026-01-27 13:05:00] -rw-------. 1 boincer umatlas   6348800 Jan 27 13:05 result.tar.gz
13:05:01 (227561): run_atlas exited; CPU time 74092.304749
13:05:01 (227561): called boinc_finish(0)

</stderr_txt>
]]>

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