Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:36 (20708): wrapper (7.7.26015): starting
07:29:36 (20708): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 07:29:36] Arguments: --nthreads 8
[2026-01-27 07:29:36] Threads: 8
[2026-01-27 07:29:36] Checking for CVMFS
[2026-01-27 07:29:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 07:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 07:29:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 07:29:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 07:29:39] 2.11.2.0 25330 60954 132228 155575 0 119 20411612 25165825 963 130560 0 26321109 99.810 17998897 2667 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 07:29:39] CVMFS is ok
[2026-01-27 07:29:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 07:29:39] Checking for apptainer binary...
[2026-01-27 07:29:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 07:29:39] Running /usr/bin/apptainer --version
[2026-01-27 07:29:40] apptainer version 1.3.2-1.el7
[2026-01-27 07:29:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 07:29:54] cg-vwn437.simple-grid.lan
[2026-01-27 07:29:54] apptainer works
[2026-01-27 07:29:54] Set ATHENA_PROC_NUMBER=8
[2026-01-27 07:29:54] Set ATHENA_CORE_NUMBER=8
[2026-01-27 07:29:55] Starting ATLAS job with PandaID=6983602271
[2026-01-27 07:29:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:55:52]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:55:52] 2026-01-27 12:55:04,099 | INFO     | sum of square deviations: 15579529320.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,103 | INFO     | sum of deviations: 223430577960.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,104 | INFO     | mean x: 1769507266.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,104 | INFO     | mean y: 2456130.753387534
[2026-01-27 13:55:52] 2026-01-27 12:55:04,104 | INFO     | intersect: -25374564126.158936
[2026-01-27 13:55:52] 2026-01-27 12:55:04,105 | INFO     | chi2: 8.15287934555908
[2026-01-27 13:55:52] 2026-01-27 12:55:04,105 | INFO     | sum of square deviations: 14954754815.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,110 | INFO     | sum of deviations: 244608654065.49997
[2026-01-27 13:55:52] 2026-01-27 12:55:04,110 | INFO     | mean x: 1769507113.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,110 | INFO     | mean y: 2461234.041208791
[2026-01-27 13:55:52] 2026-01-27 12:55:04,110 | INFO     | intersect: -28940624677.231407
[2026-01-27 13:55:52] 2026-01-27 12:55:04,111 | INFO     | chi2: 7.424076171640884
[2026-01-27 13:55:52] 2026-01-27 12:55:04,111 | INFO     | current chi2=7.424076171640884 (change=8.939212062731917 %)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,111 | INFO     | right removable region: 363
[2026-01-27 13:55:52] 2026-01-27 12:55:04,111 | INFO     | sum of square deviations: 14954754815.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,116 | INFO     | sum of deviations: 93097914916.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,116 | INFO     | mean x: 1769507418.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,116 | INFO     | mean y: 2487930.282967033
[2026-01-27 13:55:52] 2026-01-27 12:55:04,116 | INFO     | intersect: -11013236040.423172
[2026-01-27 13:55:52] 2026-01-27 12:55:04,117 | INFO     | chi2: 3.2989903128774394
[2026-01-27 13:55:52] 2026-01-27 12:55:04,117 | INFO     | current chi2=3.2989903128774394 (change=59.53588697869768 %)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,118 | INFO     | sum of square deviations: 14346910860.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,122 | INFO     | sum of deviations: 139001859.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,122 | INFO     | mean x: 1769507571.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,122 | INFO     | mean y: 2511220.7688022284
[2026-01-27 13:55:52] 2026-01-27 12:55:04,122 | INFO     | intersect: -14632876.959534425
[2026-01-27 13:55:52] 2026-01-27 12:55:04,123 | INFO     | chi2: 0.9131039694544896
[2026-01-27 13:55:52] 2026-01-27 12:55:04,123 | INFO     | current chi2=0.9131039694544896 (change=72.32171413507233 %)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,124 | INFO     | sum of square deviations: 13755764892.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,128 | INFO     | sum of deviations: -12227477724.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,128 | INFO     | mean x: 1769507723.5
[2026-01-27 13:55:52] 2026-01-27 12:55:04,128 | INFO     | mean y: 2514393.6412429377
[2026-01-27 13:55:52] 2026-01-27 12:55:04,128 | INFO     | intersect: 1575427019.1124592
[2026-01-27 13:55:52] 2026-01-27 12:55:04,129 | INFO     | chi2: 0.8490707433592335
[2026-01-27 13:55:52] 2026-01-27 12:55:04,129 | INFO     | current chi2=0.8490707433592335 (change=7.012698250946284 %)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,129 | INFO     | left removable region: 30
[2026-01-27 13:55:52] 2026-01-27 12:55:04,130 | INFO     | sum of square deviations: 11450045382.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,134 | INFO     | sum of deviations: 20049072764.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,134 | INFO     | mean x: 1769507998.0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,134 | INFO     | mean y: 2518030.036036036
[2026-01-27 13:55:52] 2026-01-27 12:55:04,134 | INFO     | intersect: -3095897166.1302114
[2026-01-27 13:55:52] 2026-01-27 12:55:04,135 | INFO     | chi2: 0.003715511720076041
[2026-01-27 13:55:52] 2026-01-27 12:55:04,135 | INFO     | current memory leak: 1.75 B/s (using 333 data points, chi2=0.00)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | ..............................
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | . Timing measurements:
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | . get job = 0 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | . initial setup = 115 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,136 | INFO     | . payload setup = 135 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,137 | INFO     | . stage-in = 0 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,137 | INFO     | . payload execution = 22591 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,137 | INFO     | . stage-out = 1 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,137 | INFO     | . log creation = 0 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,137 | INFO     | ..............................
[2026-01-27 13:55:52] 2026-01-27 12:55:04,286 | INFO     | 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,286 | INFO     | job summary report
[2026-01-27 13:55:52] 2026-01-27 12:55:04,286 | INFO     | --------------------------------------------------
[2026-01-27 13:55:52] 2026-01-27 12:55:04,286 | INFO     | PanDA job id: 6983602271
[2026-01-27 13:55:52] 2026-01-27 12:55:04,286 | INFO     | task id: 48329598
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | errors: (none)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | pilot state: finished 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | transexitcode: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | exeerrorcode: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,287 | INFO     | exeerrordiag: 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,288 | INFO     | exitcode: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,288 | INFO     | exitmsg: OK
[2026-01-27 13:55:52] 2026-01-27 12:55:04,288 | INFO     | cpuconsumptiontime: 84474 s
[2026-01-27 13:55:52] 2026-01-27 12:55:04,288 | INFO     | nevents: 400
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | neventsw: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | pid: 29098
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | pgrp: 29098
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | corecount: 8
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | event service: False
[2026-01-27 13:55:52] 2026-01-27 12:55:04,289 | INFO     | sizes: {0: 2283864, 1: 2284381, 2: 2284381, 22730: 2318893, 22732: 2327891, 22733: 2328269}
[2026-01-27 13:55:52] 2026-01-27 12:55:04,290 | INFO     | --------------------------------------------------
[2026-01-27 13:55:52] 2026-01-27 12:55:04,290 | INFO     | 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,290 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-27 13:55:52] 2026-01-27 12:55:04,348 | INFO     | PID=24617 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 13:55:52] 2026-01-27 12:55:04,348 | INFO     | .. there are 2 such processes running
[2026-01-27 13:55:52] 2026-01-27 12:55:04,356 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,357 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,357 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,357 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:55:52] 2026-01-27 12:55:04,359 | INFO     | job 6983602271 has completed (purged errors)
[2026-01-27 13:55:52] 2026-01-27 12:55:04,360 | INFO     | overall cleanup function is called
[2026-01-27 13:55:52] 2026-01-27 12:55:05,048 | WARNING  | process 29098 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 13:55:52] 2026-01-27 12:55:05,095 | INFO     | using path: /var/lib/boinc/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:55:52] 2026-01-27 12:55:05,096 | INFO     | using path: /var/lib/boinc/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:55:52] 2026-01-27 12:55:05,097 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 13:55:52] 2026-01-27 12:55:05,097 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 13:55:52] 2026-01-27 12:55:05,160 | INFO     | number of running child processes to parent process 29098: 1
[2026-01-27 13:55:52] 2026-01-27 12:55:05,161 | INFO     | maximum number of monitored processes: 8
[2026-01-27 13:55:52] 2026-01-27 12:55:05,161 | INFO     | aborting job monitoring since job object (job id=6983602271) has expired
[2026-01-27 13:55:52] 2026-01-27 12:55:05,368 | INFO     | --- collectZombieJob: --- 10, [29098]
[2026-01-27 13:55:52] 2026-01-27 12:55:05,368 | INFO     | zombie collector waiting for pid 29098
[2026-01-27 13:55:52] 2026-01-27 12:55:05,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:55:52] 2026-01-27 12:55:05,369 | INFO     | collected zombie processes
[2026-01-27 13:55:52] 2026-01-27 12:55:05,369 | INFO     | will attempt to kill all subprocesses of pid=29098
[2026-01-27 13:55:52] 2026-01-27 12:55:05,430 | INFO     | process IDs to be killed: [29098] (in reverse order)
[2026-01-27 13:55:52] 2026-01-27 12:55:05,488 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:55:52] 2026-01-27 12:55:05,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:55:52] 2026-01-27 12:55:05,490 | INFO     | did not find any defunct processes belonging to 29098
[2026-01-27 13:55:52] 2026-01-27 12:55:05,493 | INFO     | did not find any defunct processes belonging to 29098
[2026-01-27 13:55:52] 2026-01-27 12:55:05,493 | INFO     | ready for new job
[2026-01-27 13:55:52] 2026-01-27 12:55:05,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:55:52] 2026-01-27 12:55:05,496 | INFO     | **************************************
[2026-01-27 13:55:52] 2026-01-27 12:55:05,496 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:55:52] 2026-01-27 12:55:05,496 | INFO     | **************************************
[2026-01-27 13:55:52] 2026-01-27 12:55:05,496 | INFO     | 
[2026-01-27 13:55:52] 2026-01-27 12:55:05,497 | INFO     | pilot is running in a VM
[2026-01-27 13:55:52] 2026-01-27 12:55:05,497 | INFO     | architecture information:
[2026-01-27 13:55:52] 2026-01-27 12:55:05,499 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:55:52] 2026-01-27 12:55:05,517 | INFO     | cat /etc/os-release:
[2026-01-27 13:55:52] NAME="CentOS Linux"
[2026-01-27 13:55:52] VERSION="7 (Core)"
[2026-01-27 13:55:52] ID="centos"
[2026-01-27 13:55:52] ID_LIKE="rhel fedora"
[2026-01-27 13:55:52] VERSION_ID="7"
[2026-01-27 13:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:55:52] ANSI_COLOR="0;31"
[2026-01-27 13:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:55:52] HOME_URL="https://www.centos.org/"
[2026-01-27 13:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:55:52] 
[2026-01-27 13:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:55:52] 
[2026-01-27 13:55:52] 2026-01-27 12:55:05,517 | INFO     | **************************************
[2026-01-27 13:55:52] 2026-01-27 12:55:06,020 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-27 13:55:52] 2026-01-27 12:55:06,054 | INFO     | sufficient remaining disk space (493680066560 B)
[2026-01-27 13:55:52] 2026-01-27 12:55:06,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:55:52] 2026-01-27 12:55:06,055 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:55:52] 2026-01-27 12:55:06,055 | INFO     | update_server=False
[2026-01-27 13:55:52] 2026-01-27 12:55:06,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:55:52] 2026-01-27 12:55:06,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:55:52] 2026-01-27 12:55:06,056 | INFO     | will abort loop
[2026-01-27 13:55:52] 2026-01-27 12:55:06,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:55:52] 2026-01-27 12:55:06,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:55:52] 2026-01-27 12:55:06,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:55:52] 2026-01-27 12:55:06,888 | INFO     | all data control threads have been joined
[2026-01-27 13:55:52] 2026-01-27 12:55:07,061 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,061 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,062 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,177 | INFO     | all job control threads have been joined
[2026-01-27 13:55:52] 2026-01-27 12:55:07,357 | INFO     | [job] validate thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,512 | INFO     | all payload control threads have been joined
[2026-01-27 13:55:52] 2026-01-27 12:55:07,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,760 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,767 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,768 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,894 | INFO     | [data] control thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:07,911 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:08,183 | INFO     | [job] control thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:08,270 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:08,331 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:08,471 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:08,518 | INFO     | [payload] control thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:10,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:55:52] 2026-01-27 12:55:36,491 | INFO     | PID=24617 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 13:55:52] 2026-01-27 12:55:36,491 | INFO     | .. there are 2 such processes running
[2026-01-27 13:55:52] 2026-01-27 12:55:36,491 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:55:52] 2026-01-27 12:55:36,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:55:52] 2026-01-27 12:55:36,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:55:52] 2026-01-27 12:55:47,209 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:55:52] 2026-01-27 12:55:47,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515700434752)>', '<ExcThread(monitor, started 140515257333504)>']
[2026-01-27 13:55:52] 2026-01-27 12:55:47,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:55:52] 2026-01-27 12:55:47,549 | INFO     | [monitor] control thread has ended
[2026-01-27 13:55:52] 2026-01-27 12:55:52,314 | INFO     | all workflow threads have been joined
[2026-01-27 13:55:52] 2026-01-27 12:55:52,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:55:52] 2026-01-27 12:55:52,315 | INFO     | traces error code: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:52,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:55:52] 2026-01-27 12:55:52,478 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:55:52] 2026-01-27 12:55:52,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:55:52] 2026-01-27 12:55:52,497 [wrapper] pilotpid: 24617
[2026-01-27 13:55:52] 2026-01-27 12:55:52,508 [wrapper] Pilot exit status: 0
[2026-01-27 13:55:52] 2026-01-27 12:55:52,564 [wrapper] pandaids: 6983602271
[2026-01-27 13:55:52] 2026-01-27 12:55:52,642 [wrapper] cleanup supervisor_pilot  4876 24618
[2026-01-27 13:55:52] 2026-01-27 12:55:52,652 [wrapper] Test setup, not cleaning
[2026-01-27 13:55:52] 2026-01-27 12:55:52,666 [wrapper] apfmon messages muted
[2026-01-27 13:55:52] 2026-01-27 12:55:52,671 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:55:52] 2026-01-27 12:55:52,683 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:55:52]  *** Error codes and diagnostics ***
[2026-01-27 13:55:52]     "exeErrorCode": 0,
[2026-01-27 13:55:52]     "exeErrorDiag": "",
[2026-01-27 13:55:52]     "pilotErrorCode": 0,
[2026-01-27 13:55:52]     "pilotErrorDiag": "",
[2026-01-27 13:55:52]  *** Listing of results directory ***
[2026-01-27 13:55:52] total 463108
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 13:55:52] -rwx------. 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc      5111 Jan 26 02:14 queuedata.json
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc       100 Jan 27 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:55:52] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 07:29 run_atlas
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc       105 Jan 27 07:29 job.xml
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc      6391 Jan 27 07:29 init_data.xml
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc 273434957 Jan 27 07:29 EVNT.48329596._000004.pool.root.1
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc     15845 Jan 27 07:29 start_atlas.sh
[2026-01-27 13:55:52] drwxrwx--x. 2 boinc boinc        68 Jan 27 07:29 shared
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc    597771 Jan 27 07:29 input.tar.gz
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc         0 Jan 27 07:29 boinc_lockfile
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc      2605 Jan 27 07:29 pandaJob.out
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc       415 Jan 27 07:36 workernode_map.json
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc   1004335 Jan 27 07:36 agis_schedconf.cvmfs.json
[2026-01-27 13:55:52] drwx------. 5 boinc boinc      4096 Jan 27 07:36 pilot3
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc 189366179 Jan 27 13:54 HITS.48329598._000086.pool.root.1
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc       530 Jan 27 13:54 boinc_task_state.xml
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc      1015 Jan 27 13:54 memory_monitor_summary.json
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc        95 Jan 27 13:54 pilot_heartbeat.json
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc   1516246 Jan 27 13:55 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc    573983 Jan 27 13:55 log.48329598._000086.job.log.tgz.1
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc      6306 Jan 27 13:55 heartbeat.json
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc      8192 Jan 27 13:55 boinc_mmap_file
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc        28 Jan 27 13:55 wrapper_checkpoint.txt
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc      4882 Jan 27 13:55 pilotlog.txt
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc   3173878 Jan 27 13:55 log.48329598._000086.job.log.1
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc       357 Jan 27 13:55 output.list
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc       620 Jan 27 13:55 runtime_log
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc   3768320 Jan 27 13:55 result.tar.gz
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc      8816 Jan 27 13:55 runtime_log.err
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc       656 Jan 27 13:55 LmmMDmpKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlC2KDmfvuRnn.diag
[2026-01-27 13:55:52] -rw-r--r--. 1 boinc boinc     20936 Jan 27 13:55 stderr.txt
[2026-01-27 13:55:52] HITS file was successfully produced:
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc 189366179 Jan 27 13:54 shared/HITS.pool.root.1
[2026-01-27 13:55:52]  *** Contents of shared directory: ***
[2026-01-27 13:55:52] total 456236
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc 273434957 Jan 27 07:29 ATLAS.root_0
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc     15845 Jan 27 07:29 start_atlas.sh
[2026-01-27 13:55:52] -rw-r--r--. 2 boinc boinc    597771 Jan 27 07:29 input.tar.gz
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc 189366179 Jan 27 13:54 HITS.pool.root.1
[2026-01-27 13:55:52] -rw-------. 1 boinc boinc   3768320 Jan 27 13:55 result.tar.gz
13:55:53 (20708): run_atlas exited; CPU time 84738.134430
13:55:53 (20708): called boinc_finish(0)

</stderr_txt>
]]>

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