Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:35 (2932170): wrapper (7.7.26015): starting
18:02:35 (2932170): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:02:35] Arguments: --nthreads 8
[2026-01-26 18:02:35] Threads: 8
[2026-01-26 18:02:35] Checking for CVMFS
[2026-01-26 18:02:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:02:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:02:36] 2.13.3.0 11460 118525 276116 155564 0 847 31700324 32935936 29168 16776704 0 863177878 99.631 816581013 36048 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 18:02:36] CVMFS is ok
[2026-01-26 18:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:02:36] Further information can be found at the LHC@home message board.
[2026-01-26 18:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:02:36] Checking for apptainer binary...
[2026-01-26 18:02:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:02:36] Running /usr/bin/apptainer --version
[2026-01-26 18:02:36] apptainer version 1.4.5-2.el9
[2026-01-26 18:02:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:02:36] c7-3-34.aglt2.org
[2026-01-26 18:02:36] apptainer works
[2026-01-26 18:02:36] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:02:36] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:02:36] Starting ATLAS job with PandaID=6983061757
[2026-01-26 18:02:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:36:25]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:36:25]  is_altstaged=None
[2026-01-26 19:36:25]  is_tar=False
[2026-01-26 19:36:25]  lfn=log.48310724._009729.job.log.tgz.1
[2026-01-26 19:36:25]  mtime=0
[2026-01-26 19:36:25]  protocol_id=None
[2026-01-26 19:36:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:36:25]  replicas=None
[2026-01-26 19:36:25]  scope=mc23_13p6TeV
[2026-01-26 19:36:25]  status=None
[2026-01-26 19:36:25]  status_code=0
[2026-01-26 19:36:25]  storage_token=
[2026-01-26 19:36:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6983061757/log.48310724._009729.job.log.tgz.1
[2026-01-26 19:36:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/be/log.48310724._009729.job.log.tgz.1
[2026-01-26 19:36:25]  workdir=None
[2026-01-26 19:36:25] ]
[2026-01-26 19:36:25] 2026-01-27 00:35:22,130 | INFO     | transferring file log.48310724._009729.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6983061757/log.48310724._009729.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 19:36:25] 2026-01-27 00:35:22,130 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6983061757/log.48310724._009729.job.log.tgz.1 /tmp/boinchome/slots/1/log.48310724._009729.job
[2026-01-26 19:36:25] 2026-01-27 00:35:22,153 | INFO     | adding to output.list: log.48310724._009729.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/be/log.48310724._009729.job.log.tg
[2026-01-26 19:36:25] 2026-01-27 00:35:22,154 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:36:25] 2026-01-27 00:35:22,154 | INFO     | summary of transferred files:
[2026-01-26 19:36:25] 2026-01-27 00:35:22,154 | INFO     |  -- lfn=log.48310724._009729.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:36:25] 2026-01-27 00:35:22,154 | INFO     | stage-out finished correctly
[2026-01-26 19:36:25] 2026-01-27 00:35:22,697 | INFO     | time since job start (5533s) is within the limit (349056.0s)
[2026-01-26 19:36:25] 2026-01-27 00:35:24,704 | INFO     | time since job start (5535s) is within the limit (349056.0s)
[2026-01-26 19:36:25] 2026-01-27 00:35:25,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:36:25] 2026-01-27 00:35:26,711 | INFO     | time since job start (5537s) is within the limit (349056.0s)
[2026-01-26 19:36:25] 2026-01-27 00:35:26,977 | WARNING  | process 2941132 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 19:36:25] 2026-01-27 00:35:26,977 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983061757/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,055 | INFO     | number of running child processes to parent process 2941132: 1
[2026-01-26 19:36:25] 2026-01-27 00:35:28,056 | INFO     | maximum number of monitored processes: 6
[2026-01-26 19:36:25] 2026-01-27 00:35:28,593 | INFO     | job 6983061757 has state=finished
[2026-01-26 19:36:25] 2026-01-27 00:35:28,594 | INFO     | preparing for final server update for job 6983061757 in state='finished'
[2026-01-26 19:36:25] 2026-01-27 00:35:28,594 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6983061757/jobReport.json
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | job 6983061757 has finished - writing final server update
[2026-01-26 19:36:25] 2026-01-27 00:35:28,596 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,615 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983061757/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,616 | INFO     | extracted standard info from prmon json
[2026-01-26 19:36:25] 2026-01-27 00:35:28,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:36:25] 2026-01-27 00:35:28,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:36:25] 2026-01-27 00:35:28,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:36:25] 2026-01-27 00:35:28,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:36:25] 2026-01-27 00:35:28,618 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:36:25] 2026-01-27 00:35:28,618 | INFO     | sum of square deviations: 183761585.0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | sum of deviations: 1058939382.0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | mean x: 1769471453.5
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | mean y: 2515476.3571428573
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | intersect: -10194191345.887188
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | chi2: 0.0010998031493922719
[2026-01-26 19:36:25] 2026-01-27 00:35:28,619 | INFO     | current memory leak: 5.76 B/s (using 84 data points, chi2=0.00)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | could have reported an average CPU frequency of 3238 MHz (7 samples)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | ..............................
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . Timing measurements:
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . get job = 0 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . initial setup = 10 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . payload setup = 9 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . stage-in = 0 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . payload execution = 5507 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,620 | INFO     | . stage-out = 0 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,621 | INFO     | . log creation = 0 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,621 | INFO     | ..............................
[2026-01-26 19:36:25] 2026-01-27 00:35:28,711 | INFO     | 
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | job summary report
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | --------------------------------------------------
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | PanDA job id: 6983061757
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | task id: 48310724
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | errors: (none)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | pilot state: finished 
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | transexitcode: 0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | exeerrorcode: 0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | exeerrordiag: 
[2026-01-26 19:36:25] 2026-01-27 00:35:28,712 | INFO     | exitcode: 0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | exitmsg: OK
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | cpuconsumptiontime: 31464 s
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | nevents: 400
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | neventsw: 0
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | pid: 2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | pgrp: 2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | corecount: 8
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | event service: False
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | sizes: {0: 2284251, 11: 2284251, 5520: 2310816, 5521: 2319814, 5525: 2319870, 5528: 2320064}
[2026-01-26 19:36:25] 2026-01-27 00:35:28,713 | INFO     | --------------------------------------------------
[2026-01-26 19:36:25] 2026-01-27 00:35:28,714 | INFO     | 
[2026-01-26 19:36:25] 2026-01-27 00:35:28,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 19:36:25] 2026-01-27 00:35:28,742 | INFO     | time since job start (5539s) is within the limit (349056.0s)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | job 6983061757 has completed (purged errors)
[2026-01-26 19:36:25] 2026-01-27 00:35:28,780 | INFO     | overall cleanup function is called
[2026-01-26 19:36:25] 2026-01-27 00:35:29,799 | INFO     | --- collectZombieJob: --- 10, [2941132]
[2026-01-26 19:36:25] 2026-01-27 00:35:29,799 | INFO     | zombie collector waiting for pid 2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:29,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:36:25] 2026-01-27 00:35:29,812 | INFO     | collected zombie processes
[2026-01-26 19:36:25] 2026-01-27 00:35:29,813 | INFO     | will attempt to kill all subprocesses of pid=2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:30,898 | INFO     | process IDs to be killed: [2941132] (in reverse order)
[2026-01-26 19:36:25] 2026-01-27 00:35:31,222 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:36:25] 2026-01-27 00:35:31,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:36:25] 2026-01-27 00:35:31,276 | INFO     | did not find any defunct processes belonging to 2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:31,319 | INFO     | did not find any defunct processes belonging to 2941132
[2026-01-26 19:36:25] 2026-01-27 00:35:31,319 | INFO     | ready for new job
[2026-01-26 19:36:25] 2026-01-27 00:35:31,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:36:25] 2026-01-27 00:35:31,325 | INFO     | **************************************
[2026-01-26 19:36:25] 2026-01-27 00:35:31,325 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:36:25] 2026-01-27 00:35:31,325 | INFO     | **************************************
[2026-01-26 19:36:25] 2026-01-27 00:35:31,325 | INFO     | 
[2026-01-26 19:36:25] 2026-01-27 00:35:31,334 | INFO     | architecture information:
[2026-01-26 19:36:25] 2026-01-27 00:35:31,338 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:36:25] 2026-01-27 00:35:31,394 | INFO     | cat /etc/os-release:
[2026-01-26 19:36:25] NAME="CentOS Linux"
[2026-01-26 19:36:25] VERSION="7 (Core)"
[2026-01-26 19:36:25] ID="centos"
[2026-01-26 19:36:25] ID_LIKE="rhel fedora"
[2026-01-26 19:36:25] VERSION_ID="7"
[2026-01-26 19:36:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:36:25] ANSI_COLOR="0;31"
[2026-01-26 19:36:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:36:25] HOME_URL="https://www.centos.org/"
[2026-01-26 19:36:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:36:25] 
[2026-01-26 19:36:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:36:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:36:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:36:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:36:25] 
[2026-01-26 19:36:25] 2026-01-27 00:35:31,395 | INFO     | **************************************
[2026-01-26 19:36:25] 2026-01-27 00:35:31,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | INFO     | sufficient remaining disk space (72080162816 B)
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | INFO     | update_server=False
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:36:25] 2026-01-27 00:35:31,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:36:25] 2026-01-27 00:35:31,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:36:25] 2026-01-27 00:35:31,953 | INFO     | aborting loop
[2026-01-26 19:36:25] 2026-01-27 00:35:32,260 | INFO     | all data control threads have been joined
[2026-01-26 19:36:25] 2026-01-27 00:35:32,585 | INFO     | all payload control threads have been joined
[2026-01-26 19:36:25] 2026-01-27 00:35:32,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:36:25] 2026-01-27 00:35:32,958 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:32,959 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:32,971 | INFO     | all job control threads have been joined
[2026-01-26 19:36:25] 2026-01-27 00:35:33,151 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,265 | INFO     | [data] control thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,273 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,327 | INFO     | [job] validate thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,588 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,591 | INFO     | [payload] control thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:33,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:36:25] 2026-01-27 00:35:33,977 | INFO     | [job] control thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,232 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,270 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,298 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,374 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,720 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:34,803 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:35:35,961 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:36:25] 2026-01-27 00:36:02,487 | INFO     | PID=2935966 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:36:25] 2026-01-27 00:36:02,487 | INFO     | .. there are 32 such processes running
[2026-01-26 19:36:25] 2026-01-27 00:36:02,488 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:36:25] 2026-01-27 00:36:02,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:36:25] 2026-01-27 00:36:02,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:36:25] 2026-01-27 00:36:18,384 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:36:25] 2026-01-27 00:36:20,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539765815104)>', '<ExcThread(monitor, started 140539416524544)>']
[2026-01-26 19:36:25] 2026-01-27 00:36:20,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:36:25] 2026-01-27 00:36:20,602 | INFO     | [monitor] control thread has ended
[2026-01-26 19:36:25] 2026-01-27 00:36:25,081 | INFO     | all workflow threads have been joined
[2026-01-26 19:36:25] 2026-01-27 00:36:25,081 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:36:25] 2026-01-27 00:36:25,082 | INFO     | traces error code: 0
[2026-01-26 19:36:25] 2026-01-27 00:36:25,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:36:25] 2026-01-27 00:36:25,257 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:36:25] 2026-01-27 00:36:25,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:36:25] 2026-01-27 00:36:25,262 [wrapper] pilotpid: 2935966
[2026-01-26 19:36:25] 2026-01-27 00:36:25,285 [wrapper] Pilot exit status: 0
[2026-01-26 19:36:25] 2026-01-27 00:36:25,424 [wrapper] pandaids: 6983061757
[2026-01-26 19:36:25] 2026-01-27 00:36:25,759 [wrapper] cleanup supervisor_pilot 3437192 2935967
[2026-01-26 19:36:25] 2026-01-27 00:36:25,763 [wrapper] Test setup, not cleaning
[2026-01-26 19:36:25] 2026-01-27 00:36:25,765 [wrapper] apfmon messages muted
[2026-01-26 19:36:25] 2026-01-27 00:36:25,767 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:36:25] 2026-01-27 00:36:25,769 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:36:25]  *** Error codes and diagnostics ***
[2026-01-26 19:36:25]     "exeErrorCode": 0,
[2026-01-26 19:36:25]     "exeErrorDiag": "",
[2026-01-26 19:36:25]     "pilotErrorCode": 0,
[2026-01-26 19:36:25]     "pilotErrorDiag": "",
[2026-01-26 19:36:25]  *** Listing of results directory ***
[2026-01-26 19:36:25] total 678128
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 19:36:25] -rwx------. 1 boincer umatlas     36322 Jan 25 11:31 runpilot2-wrapper.sh
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:34 queuedata.json
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas       100 Jan 26 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:36:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 18:02 run_atlas
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas       105 Jan 26 18:02 job.xml
[2026-01-26 19:36:25] -rw-r--r--. 2 boincer umatlas 497375847 Jan 26 18:02 EVNT.48310721._000195.pool.root.1
[2026-01-26 19:36:25] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:02 start_atlas.sh
[2026-01-26 19:36:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 18:02 shared
[2026-01-26 19:36:25] -rw-r--r--. 2 boincer umatlas    597761 Jan 26 18:02 input.tar.gz
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas         0 Jan 26 18:02 boinc_lockfile
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 18:02 pandaJob.out
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas        57 Jan 26 18:02 setup.sh.local
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas   1006433 Jan 26 18:02 agis_schedconf.cvmfs.json
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas   1516246 Jan 26 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas       429 Jan 26 18:03 workernode_map.json
[2026-01-26 19:36:25] drwx------. 5 boincer umatlas      4096 Jan 26 18:03 pilot3
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas      6944 Jan 26 19:30 init_data.xml
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas 190805621 Jan 26 19:34 HITS.48310724._009729.pool.root.1
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas       530 Jan 26 19:34 boinc_task_state.xml
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas      1032 Jan 26 19:35 memory_monitor_summary.json
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas    353243 Jan 26 19:35 log.48310724._009729.job.log.tgz.1
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas      6319 Jan 26 19:35 heartbeat.json
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas        95 Jan 26 19:36 pilot_heartbeat.json
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 19:36 boinc_mmap_file
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas        27 Jan 26 19:36 wrapper_checkpoint.txt
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas      4820 Jan 26 19:36 pilotlog.txt
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas    781387 Jan 26 19:36 log.48310724._009729.job.log.1
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas       357 Jan 26 19:36 output.list
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas       620 Jan 26 19:36 runtime_log
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas   1157120 Jan 26 19:36 result.tar.gz
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas      9336 Jan 26 19:36 runtime_log.err
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas       651 Jan 26 19:36 RnwNDmZCI48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiM1KDm0fD5vm.diag
[2026-01-26 19:36:25] -rw-r--r--. 1 boincer umatlas     21504 Jan 26 19:36 stderr.txt
[2026-01-26 19:36:25] HITS file was successfully produced:
[2026-01-26 19:36:25] -rw-------. 1 boincer umatlas 190805621 Jan 26 19:34 shared/HITS.pool.root.1
[2026-01-26 19:36:25]  *** Contents of shared directory: ***
[2026-01-26 19:36:26] total 673796
[2026-01-26 19:36:26] -rw-r--r--. 2 boincer umatlas 497375847 Jan 26 18:02 ATLAS.root_0
[2026-01-26 19:36:26] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:02 start_atlas.sh
[2026-01-26 19:36:26] -rw-r--r--. 2 boincer umatlas    597761 Jan 26 18:02 input.tar.gz
[2026-01-26 19:36:26] -rw-------. 1 boincer umatlas 190805621 Jan 26 19:34 HITS.pool.root.1
[2026-01-26 19:36:26] -rw-------. 1 boincer umatlas   1157120 Jan 26 19:36 result.tar.gz
19:36:27 (2932170): run_atlas exited; CPU time 31651.764420
19:36:27 (2932170): called boinc_finish(0)

</stderr_txt>
]]>

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