Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:02:29 (475576): wrapper (7.7.26015): starting
23:02:29 (475576): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 23:02:29] Arguments: --nthreads 4
[2026-01-28 23:02:29] Threads: 4
[2026-01-28 23:02:29] Checking for CVMFS
[2026-01-28 23:02:29] No cvmfs_config command found, will try listing directly
[2026-01-28 23:02:29] CVMFS is ok
[2026-01-28 23:02:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 23:02:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 23:02:29] Further information can be found at the LHC@home message board.
[2026-01-28 23:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 23:02:29] Checking for apptainer binary...
[2026-01-28 23:02:29] which: no apptainer in ((null))
[2026-01-28 23:02:29] apptainer is not installed, using version from CVMFS
[2026-01-28 23:02:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 23:02:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-28 23:02:29] apptainer works
[2026-01-28 23:02:29] Set ATHENA_PROC_NUMBER=4
[2026-01-28 23:02:29] Set ATHENA_CORE_NUMBER=4
[2026-01-28 23:02:29] Starting ATLAS job with PandaID=6984043533
[2026-01-28 23:02:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 01:32:39]  *** The last 200 lines of the pilot log: ***
[2026-01-29 01:32:39] 2026-01-29 00:26:25,097 | INFO     | extracted standard info from prmon json
[2026-01-29 01:32:39] 2026-01-29 00:26:25,097 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 01:32:39] 2026-01-29 00:26:25,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 01:32:39] 2026-01-29 00:26:25,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 01:32:39] 2026-01-29 00:26:25,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 01:32:39] 2026-01-29 00:26:25,100 | INFO     | fitting pss+swap vs Time
[2026-01-29 01:32:39] 2026-01-29 00:26:25,101 | INFO     | sum of square deviations: 869188390.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,101 | INFO     | sum of deviations: 17857732249.000004
[2026-01-29 01:32:39] 2026-01-29 00:26:25,101 | INFO     | mean x: 1769642065.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,102 | INFO     | mean y: 2347304.879432624
[2026-01-29 01:32:39] 2026-01-29 00:26:25,102 | INFO     | intersect: -36355471709.86542
[2026-01-29 01:32:39] 2026-01-29 00:26:25,102 | INFO     | chi2: 1.3379481716158579
[2026-01-29 01:32:39] 2026-01-29 00:26:25,102 | INFO     | sum of square deviations: 779958810.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,103 | INFO     | sum of deviations: 17237028152.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,103 | INFO     | mean x: 1769641912.5
[2026-01-29 01:32:39] 2026-01-29 00:26:25,103 | INFO     | mean y: 2346244.75
[2026-01-29 01:32:39] 2026-01-29 00:26:25,103 | INFO     | intersect: -39106600373.497215
[2026-01-29 01:32:39] 2026-01-29 00:26:25,103 | INFO     | chi2: 1.3391833912309692
[2026-01-29 01:32:39] 2026-01-29 00:26:25,104 | INFO     | current chi2=1.3391833912309692 (change=-0.09232193304016505 %)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,104 | INFO     | right removable region: 135
[2026-01-29 01:32:39] 2026-01-29 00:26:25,104 | INFO     | sum of square deviations: 779958810.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | sum of deviations: -131981582.50000012
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | mean x: 1769642217.5
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | mean y: 2377468.419117647
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | intersect: 301829410.40623283
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | chi2: 0.0007234414274748201
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | current chi2=0.0007234414274748201 (change=99.94592903949328 %)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,105 | INFO     | sum of square deviations: 697054930.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,106 | INFO     | sum of deviations: -429293295.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,106 | INFO     | mean x: 1769642370.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,106 | INFO     | mean y: 2378008.8702290077
[2026-01-29 01:32:39] 2026-01-29 00:26:25,106 | INFO     | intersect: 1092242768.8668466
[2026-01-29 01:32:39] 2026-01-29 00:26:25,107 | INFO     | chi2: 0.0004310480495382449
[2026-01-29 01:32:39] 2026-01-29 00:26:25,107 | INFO     | current chi2=0.0004310480495382449 (change=40.41700776760565 %)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,107 | INFO     | sum of square deviations: 620244187.5
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | sum of deviations: -559938458.9999999
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | mean x: 1769642522.5
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | mean y: 2378264.111111111
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | intersect: 1599960195.5492394
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | chi2: 0.0003263246832553618
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | current chi2=0.0003263246832553618 (change=24.29505629246362 %)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,108 | INFO     | left removable region: 30
[2026-01-29 01:32:39] 2026-01-29 00:26:25,109 | INFO     | sum of square deviations: 358927660.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,109 | INFO     | sum of deviations: -331181931.99999994
[2026-01-29 01:32:39] 2026-01-29 00:26:25,109 | INFO     | mean x: 1769642797.0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,109 | INFO     | mean y: 2377926.3904761905
[2026-01-29 01:32:39] 2026-01-29 00:26:25,109 | INFO     | intersect: 1635224278.9405797
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | chi2: 0.00028158338900425385
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | current memory leak: -0.92 B/s (using 105 data points, chi2=0.00)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | could have reported an average CPU frequency of 2692 MHz (8 samples)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | ..............................
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | . Timing measurements:
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | . get job = 0 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,110 | INFO     | . initial setup = 8 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | . payload setup = 8 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | . stage-in = 0 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | . payload execution = 8588 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | . stage-out = 0 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | . log creation = 0 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,111 | INFO     | ..............................
[2026-01-29 01:32:39] 2026-01-29 00:26:25,216 | INFO     | 
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | job summary report
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | --------------------------------------------------
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | PanDA job id: 6984043533
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | task id: 48310724
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | errors: (none)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | pilot state: finished 
[2026-01-29 01:32:39] 2026-01-29 00:26:25,217 | INFO     | transexitcode: 0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | exeerrorcode: 0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | exeerrordiag: 
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | exitcode: 0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | exitmsg: OK
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | cpuconsumptiontime: 32983 s
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | nevents: 400
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | neventsw: 0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | pid: 485287
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | pgrp: 485287
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | corecount: 4
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | event service: False
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | sizes: {0: 2283778, 1: 2284239, 11: 2284239, 8600: 2312571, 8602: 2321593, 8603: 2321649, 8604: 2321971}
[2026-01-29 01:32:39] 2026-01-29 00:26:25,218 | INFO     | --------------------------------------------------
[2026-01-29 01:32:39] 2026-01-29 00:26:25,219 | INFO     | 
[2026-01-29 01:32:39] 2026-01-29 00:26:25,219 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-29 01:32:39] 2026-01-29 00:26:25,250 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,250 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,250 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,250 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | job 6984043533 has completed (purged errors)
[2026-01-29 01:32:39] 2026-01-29 00:26:25,252 | INFO     | overall cleanup function is called
[2026-01-29 01:32:39] 2026-01-29 00:26:26,074 | WARNING  | process 485287 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 01:32:39] 2026-01-29 00:26:26,261 | INFO     | --- collectZombieJob: --- 10, [485287]
[2026-01-29 01:32:39] 2026-01-29 00:26:26,262 | INFO     | zombie collector waiting for pid 485287
[2026-01-29 01:32:39] 2026-01-29 00:26:26,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 01:32:39] 2026-01-29 00:26:26,262 | INFO     | collected zombie processes
[2026-01-29 01:32:39] 2026-01-29 00:26:26,262 | INFO     | will attempt to kill all subprocesses of pid=485287
[2026-01-29 01:32:39] 2026-01-29 00:26:27,283 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 01:32:39] 2026-01-29 00:26:28,044 | INFO     | process IDs to be killed: [485287] (in reverse order)
[2026-01-29 01:32:39] 2026-01-29 00:26:28,288 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 01:32:39] 2026-01-29 00:26:28,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 01:32:39] 2026-01-29 00:26:28,343 | INFO     | did not find any defunct processes belonging to 485287
[2026-01-29 01:32:39] 2026-01-29 00:26:28,392 | INFO     | did not find any defunct processes belonging to 485287
[2026-01-29 01:32:39] 2026-01-29 00:26:28,393 | INFO     | ready for new job
[2026-01-29 01:32:39] 2026-01-29 00:26:28,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 01:32:39] 2026-01-29 00:26:28,395 | INFO     | **************************************
[2026-01-29 01:32:39] 2026-01-29 00:26:28,395 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 01:32:39] 2026-01-29 00:26:28,395 | INFO     | **************************************
[2026-01-29 01:32:39] 2026-01-29 00:26:28,395 | INFO     | 
[2026-01-29 01:32:39] 2026-01-29 00:26:28,403 | INFO     | architecture information:
[2026-01-29 01:32:39] 2026-01-29 00:26:28,403 | INFO     | executing command: cat /etc/os-release
[2026-01-29 01:32:39] 2026-01-29 00:26:28,423 | INFO     | cat /etc/os-release:
[2026-01-29 01:32:39] NAME="CentOS Linux"
[2026-01-29 01:32:39] VERSION="7 (Core)"
[2026-01-29 01:32:39] ID="centos"
[2026-01-29 01:32:39] ID_LIKE="rhel fedora"
[2026-01-29 01:32:39] VERSION_ID="7"
[2026-01-29 01:32:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 01:32:39] ANSI_COLOR="0;31"
[2026-01-29 01:32:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 01:32:39] HOME_URL="https://www.centos.org/"
[2026-01-29 01:32:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 01:32:39] 
[2026-01-29 01:32:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 01:32:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 01:32:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 01:32:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 01:32:39] 
[2026-01-29 01:32:39] 2026-01-29 00:26:28,424 | INFO     | **************************************
[2026-01-29 01:32:39] 2026-01-29 00:26:28,459 | INFO     | number of running child processes to parent process 485287: 1
[2026-01-29 01:32:39] 2026-01-29 00:26:28,459 | INFO     | maximum number of monitored processes: 6
[2026-01-29 01:32:39] 2026-01-29 00:26:28,459 | INFO     | aborting job monitoring since job object (job id=6984043533) has expired
[2026-01-29 01:32:39] 2026-01-29 00:26:28,927 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-29 01:32:39] 2026-01-29 00:26:28,950 | INFO     | sufficient remaining disk space (3304003207168 B)
[2026-01-29 01:32:39] 2026-01-29 00:26:28,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 01:32:39] 2026-01-29 00:26:28,950 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 01:32:39] 2026-01-29 00:26:28,951 | INFO     | update_server=False
[2026-01-29 01:32:39] 2026-01-29 00:26:28,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 01:32:39] 2026-01-29 00:26:28,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 01:32:39] 2026-01-29 00:26:28,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 01:32:39] 2026-01-29 00:26:28,952 | INFO     | will abort loop
[2026-01-29 01:32:39] 2026-01-29 00:26:29,113 | INFO     | all data control threads have been joined
[2026-01-29 01:32:39] 2026-01-29 00:26:29,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 01:32:39] 2026-01-29 00:26:29,953 | INFO     | [job] retrieve thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:29,953 | INFO     | [job] job monitor thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,039 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,118 | INFO     | [data] control thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 01:32:39] 2026-01-29 00:26:30,238 | INFO     | all job control threads have been joined
[2026-01-29 01:32:39] 2026-01-29 00:26:30,313 | INFO     | all payload control threads have been joined
[2026-01-29 01:32:39] 2026-01-29 00:26:30,438 | INFO     | [data] copytool_in thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,796 | INFO     | [job] validate thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,821 | INFO     | [payload] failed_post thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,849 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,957 | INFO     | [data] copytool_out thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:30,997 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:31,220 | INFO     | [job] queue monitor thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:31,243 | INFO     | [job] control thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:31,292 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:31,319 | INFO     | [payload] control thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:31,521 | INFO     | [payload] validate_post thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:33,517 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 01:32:39] 2026-01-29 00:26:58,711 | INFO     | PID=479586 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 01:32:39] 2026-01-29 00:26:58,711 | INFO     | .. there are 9 such processes running
[2026-01-29 01:32:39] 2026-01-29 00:26:58,712 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 01:32:39] 2026-01-29 00:26:58,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 01:32:39] 2026-01-29 00:26:58,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 01:32:39] 2026-01-29 00:27:02,257 | INFO     | [monitor] cgroup control has ended
[2026-01-29 01:32:39] 2026-01-29 00:27:04,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22749925156672)>', '<ExcThread(monitor, started 22749688116992)>']
[2026-01-29 01:32:39] 2026-01-29 00:27:04,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 01:32:39] 2026-01-29 00:27:04,743 | INFO     | [monitor] control thread has ended
[2026-01-29 01:32:39] 2026-01-29 00:27:09,170 | INFO     | all workflow threads have been joined
[2026-01-29 01:32:39] 2026-01-29 00:27:09,171 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 01:32:39] 2026-01-29 00:27:09,171 | INFO     | traces error code: 0
[2026-01-29 01:32:39] 2026-01-29 00:27:09,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 01:32:39] 2026-01-29 00:27:09,313 [wrapper] ==== pilot stdout END ====
[2026-01-29 01:32:39] 2026-01-29 00:27:09,316 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 01:32:39] 2026-01-29 00:27:09,319 [wrapper] pilotpid: 479586
[2026-01-29 01:32:39] 2026-01-29 00:27:09,322 [wrapper] Pilot exit status: 0
[2026-01-29 01:32:39] 2026-01-29 00:27:09,343 [wrapper] pandaids: 6984043533
[2026-01-29 01:32:39] 2026-01-29 00:27:09,509 [wrapper] cleanup supervisor_pilot  658074 479587
[2026-01-29 01:32:39] 2026-01-29 00:27:09,513 [wrapper] Test setup, not cleaning
[2026-01-29 01:32:39] 2026-01-29 00:27:09,516 [wrapper] apfmon messages muted
[2026-01-29 01:32:39] 2026-01-29 00:27:09,519 [wrapper] ==== wrapper stdout END ====
[2026-01-29 01:32:39] 2026-01-29 00:27:09,524 [wrapper] ==== wrapper stderr END ====
[2026-01-29 01:32:39]  *** Error codes and diagnostics ***
[2026-01-29 01:32:39]     "exeErrorCode": 0,
[2026-01-29 01:32:39]     "exeErrorDiag": "",
[2026-01-29 01:32:39]     "pilotErrorCode": 0,
[2026-01-29 01:32:39]     "pilotErrorDiag": "",
[2026-01-29 01:32:39]  *** Listing of results directory ***
[2026-01-29 01:32:39] total 663444
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-29 01:32:39] -rwx------ 1 boinc boinc     36322 Jan 26 06:15 runpilot2-wrapper.sh
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:16 queuedata.json
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc       100 Jan 28 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 01:32:39] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 23:02 run_atlas
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc       105 Jan 28 23:02 job.xml
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc 490004517 Jan 28 23:02 EVNT.48310721._000032.pool.root.1
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc      6691 Jan 28 23:02 init_data.xml
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc     15845 Jan 28 23:02 start_atlas.sh
[2026-01-29 01:32:39] drwxrwx--x 2 boinc boinc      4096 Jan 28 23:02 shared
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc    597775 Jan 28 23:02 input.tar.gz
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc         0 Jan 28 23:02 boinc_lockfile
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc      2532 Jan 28 23:02 pandaJob.out
[2026-01-29 01:32:39] -rw------- 1 boinc boinc   1005755 Jan 28 23:02 agis_schedconf.cvmfs.json
[2026-01-29 01:32:39] -rw------- 1 boinc boinc   1516246 Jan 28 23:02 agis_ddmendpoints.agis.ALL.json
[2026-01-29 01:32:39] -rw------- 1 boinc boinc       444 Jan 28 23:02 workernode_map.json
[2026-01-29 01:32:39] drwx------ 5 boinc boinc      4096 Jan 28 23:02 pilot3
[2026-01-29 01:32:39] -rw------- 1 boinc boinc 182338419 Jan 29 01:25 HITS.48310724._010430.pool.root.1
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc       529 Jan 29 01:26 boinc_task_state.xml
[2026-01-29 01:32:39] -rw------- 1 boinc boinc      1026 Jan 29 01:26 memory_monitor_summary.json
[2026-01-29 01:32:39] -rw------- 1 boinc boinc    324004 Jan 29 01:26 log.48310724._010430.job.log.tgz.1
[2026-01-29 01:32:39] -rw------- 1 boinc boinc      6343 Jan 29 01:26 heartbeat.json
[2026-01-29 01:32:39] -rw------- 1 boinc boinc        95 Jan 29 01:26 pilot_heartbeat.json
[2026-01-29 01:32:39] -rw------- 1 boinc boinc      5120 Jan 29 01:27 pilotlog.txt
[2026-01-29 01:32:39] -rw------- 1 boinc boinc   1213262 Jan 29 01:27 log.48310724._010430.job.log.1
[2026-01-29 01:32:39] -rw------- 1 boinc boinc       357 Jan 29 01:27 output.list
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc       620 Jan 29 01:27 runtime_log
[2026-01-29 01:32:39] -rw------- 1 boinc boinc   1556480 Jan 29 01:27 result.tar.gz
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc      9221 Jan 29 01:27 runtime_log.err
[2026-01-29 01:32:39] -rw------- 1 boinc boinc       660 Jan 29 01:27 BCxMDmo7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGc2KDm5aPo9n.diag
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc        26 Jan 29 01:32 wrapper_checkpoint.txt
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc      8192 Jan 29 01:32 boinc_mmap_file
[2026-01-29 01:32:39] -rw-r--r-- 1 boinc boinc     20867 Jan 29 01:32 stderr.txt
[2026-01-29 01:32:39] HITS file was successfully produced:
[2026-01-29 01:32:39] -rw------- 1 boinc boinc 182338419 Jan 29 01:25 shared/HITS.pool.root.1
[2026-01-29 01:32:39]  *** Contents of shared directory: ***
[2026-01-29 01:32:39] total 658720
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc 490004517 Jan 28 23:02 ATLAS.root_0
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc     15845 Jan 28 23:02 start_atlas.sh
[2026-01-29 01:32:39] -rw-r--r-- 2 boinc boinc    597775 Jan 28 23:02 input.tar.gz
[2026-01-29 01:32:39] -rw------- 1 boinc boinc 182338419 Jan 29 01:25 HITS.pool.root.1
[2026-01-29 01:32:39] -rw------- 1 boinc boinc   1556480 Jan 29 01:27 result.tar.gz
01:32:40 (475576): run_atlas exited; CPU time 33584.413371
01:32:40 (475576): called boinc_finish(0)

</stderr_txt>
]]>

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