Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:03:00 (1262327): wrapper (7.7.26015): starting
17:03:00 (1262327): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 17:03:00] Arguments: --nthreads 12
[2026-01-26 17:03:00] Threads: 12
[2026-01-26 17:03:00] Checking for CVMFS
[2026-01-26 17:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 17:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 17:03:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 17:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 17:03:00] 2.13.2.0 321610 741 52904 155564 1 188 16209042 16777217 0 130560 0 1167199 99.993 28138 1258 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-01-26 17:03:00] CVMFS is ok
[2026-01-26 17:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 17:03:00] Checking for apptainer binary...
[2026-01-26 17:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 17:03:00] Running /usr/bin/apptainer --version
[2026-01-26 17:03:00] apptainer version 1.3.0-bp160.1.36
[2026-01-26 17:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 17:03:00] boinc-runner
[2026-01-26 17:03:00] apptainer works
[2026-01-26 17:03:00] Set ATHENA_PROC_NUMBER=12
[2026-01-26 17:03:00] Set ATHENA_CORE_NUMBER=12
[2026-01-26 17:03:00] Starting ATLAS job with PandaID=6983601790
[2026-01-26 17:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:03:31]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:03:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 19:03:31]  is_altstaged=None
[2026-01-26 19:03:31]  is_tar=False
[2026-01-26 19:03:31]  lfn=log.48329261._000062.job.log.tgz.1
[2026-01-26 19:03:31]  mtime=0
[2026-01-26 19:03:31]  protocol_id=None
[2026-01-26 19:03:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:03:31]  replicas=None
[2026-01-26 19:03:31]  scope=mc23_13p6TeV
[2026-01-26 19:03:31]  status=None
[2026-01-26 19:03:31]  status_code=0
[2026-01-26 19:03:31]  storage_token=
[2026-01-26 19:03:31]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6983601790/log.48329261._000062.job.log.tgz.1
[2026-01-26 19:03:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/b6/log.48329261._000062.job.log.tgz.1
[2026-01-26 19:03:31]  workdir=None
[2026-01-26 19:03:31] ]
[2026-01-26 19:03:31] 2026-01-27 00:41:21,473 | INFO     | transferring file log.48329261._000062.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6983601790/log.48329261._000062.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-26 19:03:31] 2026-01-27 00:41:21,473 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6983601790/log.48329261._000062.job.log.tgz.1 /var/lib/boinc/slots/5/log.48329261._000062.job
[2026-01-26 19:03:31] 2026-01-27 00:41:21,485 | INFO     | adding to output.list: log.48329261._000062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/b6/log.48329261._000062.job.log.tg
[2026-01-26 19:03:31] 2026-01-27 00:41:21,486 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:03:31] 2026-01-27 00:41:21,486 | INFO     | summary of transferred files:
[2026-01-26 19:03:31] 2026-01-27 00:41:21,486 | INFO     |  -- lfn=log.48329261._000062.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:03:31] 2026-01-27 00:41:21,486 | INFO     | stage-out finished correctly
[2026-01-26 19:03:31] 2026-01-27 00:41:21,525 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:03:31] 2026-01-27 00:41:23,097 | INFO     | time since job start (5893s) is within the limit (349056.0s)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,843 | INFO     | job 6983601790 has state=finished
[2026-01-26 19:03:31] 2026-01-27 00:41:23,844 | INFO     | preparing for final server update for job 6983601790 in state='finished'
[2026-01-26 19:03:31] 2026-01-27 00:41:23,844 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6983601790/jobReport.json
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | job 6983601790 has finished - writing final server update
[2026-01-26 19:03:31] 2026-01-27 00:41:23,845 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6983601790/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | INFO     | extracted standard info from prmon json
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:03:31] 2026-01-27 00:41:23,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:03:31] 2026-01-27 00:41:23,850 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:03:31] 2026-01-27 00:41:23,850 | INFO     | sum of square deviations: 226022842.5
[2026-01-26 19:03:31] 2026-01-27 00:41:23,850 | INFO     | sum of deviations: 2232936994.5000005
[2026-01-26 19:03:31] 2026-01-27 00:41:23,850 | INFO     | mean x: 1769471624.5
[2026-01-26 19:03:31] 2026-01-27 00:41:23,850 | INFO     | mean y: 2762037.211111111
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | intersect: -17478296989.219208
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | chi2: 0.019480341281385035
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | current memory leak: 9.88 B/s (using 90 data points, chi2=0.02)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | could have reported an average CPU frequency of 4548 MHz (7 samples)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | ..............................
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . Timing measurements:
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . get job = 0 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . initial setup = 5 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . payload setup = 2 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . stage-in = 0 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . payload execution = 5873 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . stage-out = 0 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | . log creation = 0 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,851 | INFO     | ..............................
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | 
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | job summary report
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | --------------------------------------------------
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | PanDA job id: 6983601790
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | task id: 48329261
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | errors: (none)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | pilot state: finished 
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | transexitcode: 0
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | exeerrorcode: 0
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | exeerrordiag: 
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | exitcode: 0
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | exitmsg: OK
[2026-01-26 19:03:31] 2026-01-27 00:41:23,893 | INFO     | cpuconsumptiontime: 66688 s
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | nevents: 400
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | neventsw: 0
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | pid: 1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | pgrp: 1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | corecount: 12
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | event service: False
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | sizes: {0: 2284356, 11: 2284356, 5879: 2311240, 5880: 2320294, 5883: 2320432}
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | --------------------------------------------------
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | 
[2026-01-26 19:03:31] 2026-01-27 00:41:23,894 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | job 6983601790 has completed (purged errors)
[2026-01-26 19:03:31] 2026-01-27 00:41:23,914 | INFO     | overall cleanup function is called
[2026-01-26 19:03:31] 2026-01-27 00:41:24,089 | WARNING  | process 1271021 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 19:03:31] 2026-01-27 00:41:24,228 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:03:31] 2026-01-27 00:41:24,395 | INFO     | PID=1266224 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:03:31] 2026-01-27 00:41:24,400 | INFO     | number of running child processes to parent process 1271021: 1
[2026-01-26 19:03:31] 2026-01-27 00:41:24,400 | INFO     | maximum number of monitored processes: 6
[2026-01-26 19:03:31] 2026-01-27 00:41:24,400 | INFO     | aborting job monitoring since job object (job id=6983601790) has expired
[2026-01-26 19:03:31] 2026-01-27 00:41:24,923 | INFO     | --- collectZombieJob: --- 10, [1271021]
[2026-01-26 19:03:31] 2026-01-27 00:41:24,923 | INFO     | zombie collector waiting for pid 1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:24,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:03:31] 2026-01-27 00:41:24,923 | INFO     | collected zombie processes
[2026-01-26 19:03:31] 2026-01-27 00:41:24,923 | INFO     | will attempt to kill all subprocesses of pid=1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:24,998 | INFO     | process IDs to be killed: [1271021] (in reverse order)
[2026-01-26 19:03:31] 2026-01-27 00:41:25,038 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:03:31] 2026-01-27 00:41:25,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:03:31] 2026-01-27 00:41:25,041 | INFO     | did not find any defunct processes belonging to 1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:25,044 | INFO     | did not find any defunct processes belonging to 1271021
[2026-01-26 19:03:31] 2026-01-27 00:41:25,044 | INFO     | ready for new job
[2026-01-26 19:03:31] 2026-01-27 00:41:25,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:03:31] 2026-01-27 00:41:25,045 | INFO     | **************************************
[2026-01-26 19:03:31] 2026-01-27 00:41:25,045 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:03:31] 2026-01-27 00:41:25,045 | INFO     | **************************************
[2026-01-26 19:03:31] 2026-01-27 00:41:25,045 | INFO     | 
[2026-01-26 19:03:31] 2026-01-27 00:41:25,046 | INFO     | architecture information:
[2026-01-26 19:03:31] 2026-01-27 00:41:25,047 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:03:31] 2026-01-27 00:41:25,058 | INFO     | cat /etc/os-release:
[2026-01-26 19:03:31] NAME="CentOS Linux"
[2026-01-26 19:03:31] VERSION="7 (Core)"
[2026-01-26 19:03:31] ID="centos"
[2026-01-26 19:03:31] ID_LIKE="rhel fedora"
[2026-01-26 19:03:31] VERSION_ID="7"
[2026-01-26 19:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:03:31] ANSI_COLOR="0;31"
[2026-01-26 19:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:03:31] HOME_URL="https://www.centos.org/"
[2026-01-26 19:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:03:31] 
[2026-01-26 19:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:03:31] 
[2026-01-26 19:03:31] 2026-01-27 00:41:25,058 | INFO     | **************************************
[2026-01-26 19:03:31] 2026-01-27 00:41:25,560 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | INFO     | sufficient remaining disk space (3860193083392 B)
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | INFO     | update_server=False
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:03:31] 2026-01-27 00:41:25,573 | INFO     | aborting loop
[2026-01-26 19:03:31] 2026-01-27 00:41:25,740 | INFO     | all job control threads have been joined
[2026-01-26 19:03:31] 2026-01-27 00:41:26,336 | INFO     | all data control threads have been joined
[2026-01-26 19:03:31] 2026-01-27 00:41:26,436 | INFO     | all payload control threads have been joined
[2026-01-26 19:03:31] 2026-01-27 00:41:26,577 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:26,578 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:26,578 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:26,745 | INFO     | [job] control thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:26,982 | INFO     | [job] validate thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:03:31] 2026-01-27 00:41:27,057 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,063 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,235 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,341 | INFO     | [data] control thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,428 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,441 | INFO     | [payload] control thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:27,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:03:31] 2026-01-27 00:41:27,870 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:28,170 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:29,037 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:31,578 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:36,498 | INFO     | job.realtimelogging is not enabled
[2026-01-26 19:03:31] 2026-01-27 00:41:37,503 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:03:31] 2026-01-27 00:41:56,528 | INFO     | PID=1266224 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:03:31] 2026-01-27 00:41:56,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:03:31] 2026-01-27 00:41:56,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:03:31] 2026-01-27 00:41:56,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:03:31] 2026-01-27 00:42:19,508 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:03:31] 2026-01-27 00:42:20,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424113252160)>', '<ExcThread(monitor, started 140423485978368)>']
[2026-01-26 19:03:31] 2026-01-27 00:42:20,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:03:31] 2026-01-27 00:42:20,650 | INFO     | [monitor] control thread has ended
[2026-01-26 19:03:31] 2026-01-27 00:42:25,547 | INFO     | all workflow threads have been joined
[2026-01-26 19:03:31] 2026-01-27 00:42:25,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:03:31] 2026-01-27 00:42:25,547 | INFO     | traces error code: 0
[2026-01-26 19:03:31] 2026-01-27 00:42:25,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:03:31] 2026-01-27 00:42:25,619 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:03:31] 2026-01-27 00:42:25,621 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:03:31] 2026-01-27 00:42:25,624 [wrapper] pilotpid: 1266224
[2026-01-26 19:03:31] 2026-01-27 00:42:25,626 [wrapper] Pilot exit status: 0
[2026-01-26 19:03:31] 2026-01-27 00:42:25,634 [wrapper] pandaids: 6983601790
[2026-01-26 19:03:31] 2026-01-27 00:42:25,659 [wrapper] cleanup supervisor_pilot 1354852 1266225
[2026-01-26 19:03:31] 2026-01-27 00:42:25,661 [wrapper] Test setup, not cleaning
[2026-01-26 19:03:31] 2026-01-27 00:42:25,663 [wrapper] apfmon messages muted
[2026-01-26 19:03:31] 2026-01-27 00:42:25,665 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:03:31] 2026-01-27 00:42:25,667 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:03:31]  *** Error codes and diagnostics ***
[2026-01-26 19:03:31]     "exeErrorCode": 0,
[2026-01-26 19:03:31]     "exeErrorDiag": "",
[2026-01-26 19:03:31]     "pilotErrorCode": 0,
[2026-01-26 19:03:31]     "pilotErrorDiag": "",
[2026-01-26 19:03:31]  *** Listing of results directory ***
[2026-01-26 19:03:31] total 467136
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc    584422 Jan 25 16:54 pilot3.tar.gz
[2026-01-26 19:03:31] -rwx------. 1 boinc boinc     36322 Jan 25 16:54 runpilot2-wrapper.sh
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc      5111 Jan 25 16:56 queuedata.json
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc       100 Jan 26 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:03:31] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 17:03 run_atlas
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc       105 Jan 26 17:03 job.xml
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc 265271899 Jan 26 17:03 EVNT.48329259._000003.pool.root.1
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc     15845 Jan 26 17:03 start_atlas.sh
[2026-01-26 19:03:31] drwxrwx--x. 1 boinc boinc        76 Jan 26 17:03 shared
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc    597773 Jan 26 17:03 input.tar.gz
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc     10047 Jan 26 17:03 init_data.xml
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc         0 Jan 26 17:03 boinc_setup_complete
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc         0 Jan 26 17:03 boinc_lockfile
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc      2606 Jan 26 17:03 pandaJob.out
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc        63 Jan 26 17:03 setup.sh.local
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc   1006433 Jan 26 17:03 agis_schedconf.cvmfs.json
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc   1516246 Jan 26 17:03 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc       431 Jan 26 17:03 workernode_map.json
[2026-01-26 19:03:31] drwx------. 1 boinc boinc       414 Jan 26 17:03 pilot3
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc 206615955 Jan 26 18:40 HITS.48329261._000062.pool.root.1
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc       529 Jan 26 18:41 boinc_task_state.xml
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc      1023 Jan 26 18:41 memory_monitor_summary.json
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc    403621 Jan 26 18:41 log.48329261._000062.job.log.tgz.1
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc      6328 Jan 26 18:41 heartbeat.json
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc        95 Jan 26 18:41 pilot_heartbeat.json
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc      4818 Jan 26 18:42 pilotlog.txt
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc    860741 Jan 26 18:42 log.48329261._000062.job.log.1
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc       357 Jan 26 18:42 output.list
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc       620 Jan 26 18:42 runtime_log
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc   1280000 Jan 26 18:42 result.tar.gz
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc      9395 Jan 26 18:42 runtime_log.err
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc       652 Jan 26 18:42 ezdMDmQBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzX8KDmSzYnCo.diag
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc      8192 Jan 26 19:03 boinc_mmap_file
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc     21226 Jan 26 19:03 stderr.txt
[2026-01-26 19:03:31] -rw-r--r--. 1 boinc boinc        27 Jan 26 19:03 wrapper_checkpoint.txt
[2026-01-26 19:03:31] HITS file was successfully produced:
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc 206615955 Jan 26 18:40 shared/HITS.pool.root.1
[2026-01-26 19:03:31]  *** Contents of shared directory: ***
[2026-01-26 19:03:31] total 462684
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc 265271899 Jan 26 17:03 ATLAS.root_0
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc     15845 Jan 26 17:03 start_atlas.sh
[2026-01-26 19:03:31] -rw-r--r--. 2 boinc boinc    597773 Jan 26 17:03 input.tar.gz
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc 206615955 Jan 26 18:40 HITS.pool.root.1
[2026-01-26 19:03:31] -rw-------. 1 boinc boinc   1280000 Jan 26 18:42 result.tar.gz
19:03:33 (1262327): run_atlas exited; CPU time 66737.189564
19:03:33 (1262327): called boinc_finish(0)

</stderr_txt>
]]>

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