Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:26 (885657): wrapper (7.7.26015): starting
17:08:26 (885657): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 17:08:26] Arguments: --nthreads 8
[2026-01-26 17:08:26] Threads: 8
[2026-01-26 17:08:26] Checking for CVMFS
[2026-01-26 17:08:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 17:08:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 17:08:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 17:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 17:08:28] 2.13.3.0 10276 46443 173596 155562 2 863 31753886 40960000 33099 16776704 0 239948964 99.751 156136760 47682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 17:08:28] CVMFS is ok
[2026-01-26 17:08:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 17:08:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 17:08:28] Further information can be found at the LHC@home message board.
[2026-01-26 17:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 17:08:28] Checking for apptainer binary...
[2026-01-26 17:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 17:08:28] Running /usr/bin/apptainer --version
[2026-01-26 17:08:28] apptainer version 1.4.5-2.el9
[2026-01-26 17:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 17:08:29] c-208-36.aglt2.org
[2026-01-26 17:08:29] apptainer works
[2026-01-26 17:08:29] Set ATHENA_PROC_NUMBER=8
[2026-01-26 17:08:29] Set ATHENA_CORE_NUMBER=8
[2026-01-26 17:08:29] Starting ATLAS job with PandaID=6983344489
[2026-01-26 17:08:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:58:50]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:58:50] 2026-01-26 23:58:14,041 | INFO     | preparing for final server update for job 6983344489 in state='finished'
[2026-01-26 18:58:50] 2026-01-26 23:58:14,041 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6983344489/jobReport.json
[2026-01-26 18:58:50] 2026-01-26 23:58:14,042 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-26 18:58:50] 2026-01-26 23:58:14,042 | INFO     | this job has now completed (state=finished)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,042 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,042 | INFO     | log transfer has been attempted: DONE
[2026-01-26 18:58:50] 2026-01-26 23:58:14,043 | INFO     | job 6983344489 has finished - writing final server update
[2026-01-26 18:58:50] 2026-01-26 23:58:14,043 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,151 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983344489/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,151 | INFO     | extracted standard info from prmon json
[2026-01-26 18:58:50] 2026-01-26 23:58:14,151 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:58:50] 2026-01-26 23:58:14,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:58:50] 2026-01-26 23:58:14,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:58:50] 2026-01-26 23:58:14,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:58:50] 2026-01-26 23:58:14,191 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:58:50] 2026-01-26 23:58:14,191 | INFO     | sum of square deviations: 358924856.9142853
[2026-01-26 18:58:50] 2026-01-26 23:58:14,191 | INFO     | sum of deviations: 28470950307.91429
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | mean x: 1769468680.0285714
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | mean y: 2391502.0285714287
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | intersect: -140356945250.5525
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | chi2: 4.7123204384332755
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | sum of square deviations: 310044030.9600007
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | sum of deviations: 33962795925.519997
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | mean x: 1769468527.52
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | mean y: 2407798.49
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | intersect: -193828443615.46683
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | chi2: 3.972550050086068
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | current chi2=3.972550050086068 (change=15.698643545411395 %)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,192 | INFO     | right removable region: 99
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | sum of square deviations: 310048606.91
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | sum of deviations: -2478863007.0700026
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | mean x: 1769468832.53
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | mean y: 2487684.19
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | intersect: 14149530223.217424
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | chi2: 1.0225270064849803
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | current chi2=1.0225270064849803 (change=78.30098738308754 %)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,193 | INFO     | sum of square deviations: 265829827.9578947
[2026-01-26 18:58:50] 2026-01-26 23:58:14,215 | INFO     | sum of deviations: -8985782231.11579
[2026-01-26 18:58:50] 2026-01-26 23:58:14,215 | INFO     | mean x: 1769468985.0210526
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | mean y: 2509903.557894737
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | intersect: 59815447700.106094
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | chi2: 0.8364410575455071
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | current chi2=0.8364410575455071 (change=18.19863414455514 %)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | left removable region: 20
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | sum of square deviations: 152854532.98734194
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | sum of deviations: -2476559919.151899
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | mean x: 1769469107.012658
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | mean y: 2535484.1518987343
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | intersect: 28671598697.13457
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | chi2: 0.0023618147053146433
[2026-01-26 18:58:50] 2026-01-26 23:58:14,216 | INFO     | current memory leak: -16.20 B/s (using 79 data points, chi2=0.00)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | ..............................
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . Timing measurements:
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . get job = 0 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . initial setup = 37 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . payload setup = 41 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . stage-in = 0 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . payload execution = 6410 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . stage-out = 1 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | . log creation = 0 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,217 | INFO     | ..............................
[2026-01-26 18:58:50] 2026-01-26 23:58:14,581 | INFO     | 
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | job summary report
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | --------------------------------------------------
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | PanDA job id: 6983344489
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | task id: 48317872
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | errors: (none)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | pilot state: finished 
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | transexitcode: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | exeerrorcode: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | exeerrordiag: 
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | exitcode: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | exitmsg: OK
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | cpuconsumptiontime: 21874 s
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | nevents: 400
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | neventsw: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | pid: 916718
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | pgrp: 916718
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | corecount: 8
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | event service: False
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | sizes: {0: 2252628, 1: 2284226, 11: 2284254, 6457: 2311381, 6459: 2320379, 6460: 2320435, 6461: 2320757}
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | --------------------------------------------------
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | 
[2026-01-26 18:58:50] 2026-01-26 23:58:14,582 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | job 6983344489 has completed (purged errors)
[2026-01-26 18:58:50] 2026-01-26 23:58:14,796 | INFO     | overall cleanup function is called
[2026-01-26 18:58:50] 2026-01-26 23:58:14,846 | INFO     | PID=897695 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 18:58:50] 2026-01-26 23:58:14,847 | INFO     | .. there are 32 such processes running
[2026-01-26 18:58:50] 2026-01-26 23:58:15,817 | INFO     | --- collectZombieJob: --- 10, [916718]
[2026-01-26 18:58:50] 2026-01-26 23:58:15,818 | INFO     | zombie collector waiting for pid 916718
[2026-01-26 18:58:50] 2026-01-26 23:58:15,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:58:50] 2026-01-26 23:58:15,818 | INFO     | collected zombie processes
[2026-01-26 18:58:50] 2026-01-26 23:58:15,818 | INFO     | will attempt to kill all subprocesses of pid=916718
[2026-01-26 18:58:50] 2026-01-26 23:58:16,900 | INFO     | process IDs to be killed: [916718] (in reverse order)
[2026-01-26 18:58:50] 2026-01-26 23:58:17,286 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:58:50] 2026-01-26 23:58:17,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:58:50] 2026-01-26 23:58:17,332 | INFO     | did not find any defunct processes belonging to 916718
[2026-01-26 18:58:50] 2026-01-26 23:58:17,360 | INFO     | did not find any defunct processes belonging to 916718
[2026-01-26 18:58:50] 2026-01-26 23:58:17,360 | INFO     | ready for new job
[2026-01-26 18:58:50] 2026-01-26 23:58:17,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:58:50] 2026-01-26 23:58:17,364 | INFO     | **************************************
[2026-01-26 18:58:50] 2026-01-26 23:58:17,364 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:58:50] 2026-01-26 23:58:17,364 | INFO     | **************************************
[2026-01-26 18:58:50] 2026-01-26 23:58:17,364 | INFO     | 
[2026-01-26 18:58:50] 2026-01-26 23:58:17,373 | INFO     | architecture information:
[2026-01-26 18:58:50] 2026-01-26 23:58:17,377 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:58:50] 2026-01-26 23:58:17,501 | INFO     | cat /etc/os-release:
[2026-01-26 18:58:50] NAME="CentOS Linux"
[2026-01-26 18:58:50] VERSION="7 (Core)"
[2026-01-26 18:58:50] ID="centos"
[2026-01-26 18:58:50] ID_LIKE="rhel fedora"
[2026-01-26 18:58:50] VERSION_ID="7"
[2026-01-26 18:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:58:50] ANSI_COLOR="0;31"
[2026-01-26 18:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:58:50] HOME_URL="https://www.centos.org/"
[2026-01-26 18:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:58:50] 
[2026-01-26 18:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:58:50] 
[2026-01-26 18:58:50] 2026-01-26 23:58:17,501 | INFO     | **************************************
[2026-01-26 18:58:50] 2026-01-26 23:58:18,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | INFO     | sufficient remaining disk space (166848364544 B)
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | INFO     | update_server=False
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:58:50] 2026-01-26 23:58:18,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:58:50] 2026-01-26 23:58:18,066 | INFO     | aborting loop
[2026-01-26 18:58:50] 2026-01-26 23:58:18,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:58:50] 2026-01-26 23:58:18,623 | INFO     | all payload control threads have been joined
[2026-01-26 18:58:50] 2026-01-26 23:58:19,035 | INFO     | all data control threads have been joined
[2026-01-26 18:58:50] 2026-01-26 23:58:19,071 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,071 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,231 | INFO     | all job control threads have been joined
[2026-01-26 18:58:50] 2026-01-26 23:58:19,254 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:58:50] 2026-01-26 23:58:19,575 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:58:50] 2026-01-26 23:58:19,629 | INFO     | [payload] control thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,641 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:19,880 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,043 | INFO     | [data] control thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,234 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,237 | INFO     | [job] control thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,367 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,368 | INFO     | [job] validate thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,420 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:20,585 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:23,591 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:28,191 | INFO     | job.realtimelogging is not enabled
[2026-01-26 18:58:50] 2026-01-26 23:58:29,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:58:50] 2026-01-26 23:58:32,782 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:58:50] 2026-01-26 23:58:33,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745806464832)>', '<ExcThread(monitor, started 139745443161856)>']
[2026-01-26 18:58:50] 2026-01-26 23:58:38,477 | INFO     | all workflow threads have been joined
[2026-01-26 18:58:50] 2026-01-26 23:58:38,478 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:58:50] 2026-01-26 23:58:38,478 | INFO     | traces error code: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:38,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:58:50] 2026-01-26 23:58:47,880 | INFO     | PID=897695 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 18:58:50] 2026-01-26 23:58:47,880 | INFO     | .. there are 33 such processes running
[2026-01-26 18:58:50] 2026-01-26 23:58:47,881 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:58:50] 2026-01-26 23:58:47,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:58:50] 2026-01-26 23:58:47,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:58:50] 2026-01-26 23:58:47,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:58:50] 2026-01-26 23:58:47,881 | INFO     | [monitor] control thread has ended
[2026-01-26 18:58:50] 2026-01-26 23:58:48,901 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:58:50] 2026-01-26 23:58:48,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:58:50] 2026-01-26 23:58:48,962 [wrapper] pilotpid: 897695
[2026-01-26 18:58:50] 2026-01-26 23:58:48,973 [wrapper] Pilot exit status: 0
[2026-01-26 18:58:50] 2026-01-26 23:58:49,128 [wrapper] pandaids: 6983344489
[2026-01-26 18:58:50] 2026-01-26 23:58:49,265 [wrapper] cleanup supervisor_pilot 1532328 897696
[2026-01-26 18:58:50] 2026-01-26 23:58:49,283 [wrapper] Test setup, not cleaning
[2026-01-26 18:58:50] 2026-01-26 23:58:49,294 [wrapper] apfmon messages muted
[2026-01-26 18:58:50] 2026-01-26 23:58:49,313 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:58:50] 2026-01-26 23:58:49,330 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:58:50]  *** Error codes and diagnostics ***
[2026-01-26 18:58:50]     "exeErrorCode": 0,
[2026-01-26 18:58:50]     "exeErrorDiag": "",
[2026-01-26 18:58:50]     "pilotErrorCode": 0,
[2026-01-26 18:58:50]     "pilotErrorDiag": "",
[2026-01-26 18:58:50]  *** Listing of results directory ***
[2026-01-26 18:58:50] total 669196
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 18:58:50] -rwx------. 1 boincer umatlas     36322 Jan 25 15:51 runpilot2-wrapper.sh
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 15:54 queuedata.json
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas       100 Jan 26 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:58:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 17:08 run_atlas
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas       105 Jan 26 17:08 job.xml
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas 496330969 Jan 26 17:08 EVNT.48317869._000016.pool.root.1
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 17:08 start_atlas.sh
[2026-01-26 18:58:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 17:08 shared
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas    597748 Jan 26 17:08 input.tar.gz
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas         0 Jan 26 17:08 boinc_lockfile
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas      2511 Jan 26 17:08 pandaJob.out
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas        57 Jan 26 17:08 setup.sh.local
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas   1006433 Jan 26 17:09 agis_schedconf.cvmfs.json
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas   1516246 Jan 26 17:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas       431 Jan 26 17:10 workernode_map.json
[2026-01-26 18:58:50] drwx------. 5 boincer umatlas      4096 Jan 26 17:10 pilot3
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas 182538944 Jan 26 18:57 HITS.48317872._000771.pool.root.1
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas       531 Jan 26 18:57 boinc_task_state.xml
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas      1048 Jan 26 18:58 memory_monitor_summary.json
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas      7183 Jan 26 18:58 init_data.xml
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas    350098 Jan 26 18:58 log.48317872._000771.job.log.tgz.1
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas      6361 Jan 26 18:58 heartbeat.json
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas       822 Jan 26 18:58 pilotlog.txt
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas        95 Jan 26 18:58 pilot_heartbeat.json
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 18:58 boinc_mmap_file
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas        27 Jan 26 18:58 wrapper_checkpoint.txt
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas    870359 Jan 26 18:58 log.48317872._000771.job.log.1
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas       357 Jan 26 18:58 output.list
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas       620 Jan 26 18:58 runtime_log
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas   1239040 Jan 26 18:58 result.tar.gz
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas      9341 Jan 26 18:58 runtime_log.err
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas       657 Jan 26 18:58 RfKKDmRGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnp1KDmPUpeLo.diag
[2026-01-26 18:58:50] -rw-r--r--. 1 boincer umatlas     21370 Jan 26 18:58 stderr.txt
[2026-01-26 18:58:50] HITS file was successfully produced:
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas 182538944 Jan 26 18:57 shared/HITS.pool.root.1
[2026-01-26 18:58:50]  *** Contents of shared directory: ***
[2026-01-26 18:58:50] total 664784
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas 496330969 Jan 26 17:08 ATLAS.root_0
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 17:08 start_atlas.sh
[2026-01-26 18:58:50] -rw-r--r--. 2 boincer umatlas    597748 Jan 26 17:08 input.tar.gz
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas 182538944 Jan 26 18:57 HITS.pool.root.1
[2026-01-26 18:58:50] -rw-------. 1 boincer umatlas   1239040 Jan 26 18:58 result.tar.gz
18:58:52 (885657): run_atlas exited; CPU time 22115.530951
18:58:52 (885657): called boinc_finish(0)

</stderr_txt>
]]>

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