Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:04 (218638): wrapper (7.7.26015): starting
18:54:04 (218638): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:54:04] Arguments: --nthreads 8
[2026-01-26 18:54:04] Threads: 8
[2026-01-26 18:54:04] Checking for CVMFS
[2026-01-26 18:54:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:54:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:54:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:54:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:54:05] 2.13.3.0 270452 6076 141416 155566 3 58 32269229 40960001 13183 16776704 0 5651368 99.005 15233139 38139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 18:54:05] CVMFS is ok
[2026-01-26 18:54:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:54:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:54:05] Further information can be found at the LHC@home message board.
[2026-01-26 18:54:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:54:05] Checking for apptainer binary...
[2026-01-26 18:54:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:54:05] Running /usr/bin/apptainer --version
[2026-01-26 18:54:05] apptainer version 1.4.5-2.el9
[2026-01-26 18:54:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:54:05] c6-6-39-1.aglt2.org
[2026-01-26 18:54:05] apptainer works
[2026-01-26 18:54:05] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:54:05] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:54:05] Starting ATLAS job with PandaID=6983772612
[2026-01-26 18:54:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:15:48]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:15:48] 2026-01-27 02:15:02,489 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983772612/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,490 | INFO     | extracted standard info from prmon json
[2026-01-26 21:15:48] 2026-01-27 02:15:02,490 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:15:48] 2026-01-27 02:15:02,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:15:48] 2026-01-27 02:15:02,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:15:48] 2026-01-27 02:15:02,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:15:48] 2026-01-27 02:15:02,507 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:15:48] 2026-01-27 02:15:02,508 | INFO     | sum of square deviations: 814883068.9927546
[2026-01-26 21:15:48] 2026-01-27 02:15:02,509 | INFO     | sum of deviations: -1396637705.231885
[2026-01-26 21:15:48] 2026-01-27 02:15:02,509 | INFO     | mean x: 1769475861.6594203
[2026-01-26 21:15:48] 2026-01-27 02:15:02,509 | INFO     | mean y: 2538822.1014492754
[2026-01-26 21:15:48] 2026-01-27 02:15:02,510 | INFO     | intersect: 3035264376.144343
[2026-01-26 21:15:48] 2026-01-27 02:15:02,510 | INFO     | chi2: 1.6400159042210436
[2026-01-26 21:15:48] 2026-01-27 02:15:02,510 | INFO     | sum of square deviations: 729483526.3609042
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | sum of deviations: -1152599289.6541367
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | mean x: 1769475709.1654136
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | mean y: 2539258.07518797
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | intersect: 2798348034.7565775
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | chi2: 1.6404320922163995
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | current chi2=1.6404320922163995 (change=-0.025377070690884393 %)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,511 | INFO     | right removable region: 132
[2026-01-26 21:15:48] 2026-01-27 02:15:02,512 | INFO     | sum of square deviations: 729470106.3609042
[2026-01-26 21:15:48] 2026-01-27 02:15:02,521 | INFO     | sum of deviations: -21110780311.53383
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | mean x: 1769476014.1654136
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | mean y: 2573388.796992481
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | intersect: 51211004105.61821
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | chi2: 0.21100925023972214
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | current chi2=0.21100925023972214 (change=87.13370707585028 %)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,522 | INFO     | sum of square deviations: 650267521.1796875
[2026-01-26 21:15:48] 2026-01-27 02:15:02,523 | INFO     | sum of deviations: -16782020104.695312
[2026-01-26 21:15:48] 2026-01-27 02:15:02,523 | INFO     | mean x: 1769476166.6484375
[2026-01-26 21:15:48] 2026-01-27 02:15:02,523 | INFO     | mean y: 2564963.2734375
[2026-01-26 21:15:48] 2026-01-27 02:15:02,523 | INFO     | intersect: 45668977072.55605
[2026-01-26 21:15:48] 2026-01-27 02:15:02,523 | INFO     | chi2: 0.1931819124964878
[2026-01-26 21:15:48] 2026-01-27 02:15:02,524 | INFO     | current chi2=0.1931819124964878 (change=8.448604846934984 %)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,524 | INFO     | left removable region: 20
[2026-01-26 21:15:48] 2026-01-27 02:15:02,524 | INFO     | sum of square deviations: 435613827.1071427
[2026-01-26 21:15:48] 2026-01-27 02:15:02,524 | INFO     | sum of deviations: -3057877544.8035693
[2026-01-26 21:15:48] 2026-01-27 02:15:02,525 | INFO     | mean x: 1769476288.6607144
[2026-01-26 21:15:48] 2026-01-27 02:15:02,525 | INFO     | mean y: 2535977.7946428573
[2026-01-26 21:15:48] 2026-01-27 02:15:02,525 | INFO     | intersect: 12423725280.004553
[2026-01-26 21:15:48] 2026-01-27 02:15:02,525 | INFO     | chi2: 0.06788759752340762
[2026-01-26 21:15:48] 2026-01-27 02:15:02,525 | INFO     | current memory leak: -7.02 B/s (using 112 data points, chi2=0.07)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,538 | INFO     | could have reported an average CPU frequency of 2926 MHz (8 samples)
[2026-01-26 21:15:48] 2026-01-27 02:15:02,538 | INFO     | ..............................
[2026-01-26 21:15:48] 2026-01-27 02:15:02,538 | INFO     | . Timing measurements:
[2026-01-26 21:15:48] 2026-01-27 02:15:02,538 | INFO     | . get job = 0 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,538 | INFO     | . initial setup = 8 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | . payload setup = 7 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | . stage-in = 0 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | . payload execution = 8421 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | . stage-out = 1 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | . log creation = 0 s
[2026-01-26 21:15:48] 2026-01-27 02:15:02,539 | INFO     | ..............................
[2026-01-26 21:15:48] 2026-01-27 02:15:03,070 | INFO     | 
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | job summary report
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | --------------------------------------------------
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | PanDA job id: 6983772612
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | task id: 48317872
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | errors: (none)
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | pilot state: finished 
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | transexitcode: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | exeerrorcode: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | exeerrordiag: 
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | exitcode: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:03,071 | INFO     | exitmsg: OK
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | cpuconsumptiontime: 39436 s
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | nevents: 400
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | neventsw: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | pid: 227426
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | pgrp: 227426
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | corecount: 8
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | event service: False
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | sizes: {0: 2283797, 1: 2284258, 8433: 2312335, 8434: 2321333, 8435: 2321583}
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | --------------------------------------------------
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | 
[2026-01-26 21:15:48] 2026-01-27 02:15:03,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 21:15:48] 2026-01-27 02:15:03,233 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | job 6983772612 has completed (purged errors)
[2026-01-26 21:15:48] 2026-01-27 02:15:03,235 | INFO     | overall cleanup function is called
[2026-01-26 21:15:48] 2026-01-27 02:15:04,245 | INFO     | --- collectZombieJob: --- 10, [227426]
[2026-01-26 21:15:48] 2026-01-27 02:15:04,246 | INFO     | zombie collector waiting for pid 227426
[2026-01-26 21:15:48] 2026-01-27 02:15:04,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:15:48] 2026-01-27 02:15:04,246 | INFO     | collected zombie processes
[2026-01-26 21:15:48] 2026-01-27 02:15:04,247 | INFO     | will attempt to kill all subprocesses of pid=227426
[2026-01-26 21:15:48] 2026-01-27 02:15:04,599 | INFO     | process IDs to be killed: [227426] (in reverse order)
[2026-01-26 21:15:48] 2026-01-27 02:15:04,690 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:15:48] 2026-01-27 02:15:04,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:15:48] 2026-01-27 02:15:04,700 | INFO     | did not find any defunct processes belonging to 227426
[2026-01-26 21:15:48] 2026-01-27 02:15:04,709 | INFO     | did not find any defunct processes belonging to 227426
[2026-01-26 21:15:48] 2026-01-27 02:15:04,709 | INFO     | ready for new job
[2026-01-26 21:15:48] 2026-01-27 02:15:04,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:15:48] 2026-01-27 02:15:04,711 | INFO     | **************************************
[2026-01-26 21:15:48] 2026-01-27 02:15:04,712 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:15:48] 2026-01-27 02:15:04,712 | INFO     | **************************************
[2026-01-26 21:15:48] 2026-01-27 02:15:04,712 | INFO     | 
[2026-01-26 21:15:48] 2026-01-27 02:15:04,715 | INFO     | architecture information:
[2026-01-26 21:15:48] 2026-01-27 02:15:04,715 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:15:48] 2026-01-27 02:15:04,732 | INFO     | cat /etc/os-release:
[2026-01-26 21:15:48] NAME="CentOS Linux"
[2026-01-26 21:15:48] VERSION="7 (Core)"
[2026-01-26 21:15:48] ID="centos"
[2026-01-26 21:15:48] ID_LIKE="rhel fedora"
[2026-01-26 21:15:48] VERSION_ID="7"
[2026-01-26 21:15:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:15:48] ANSI_COLOR="0;31"
[2026-01-26 21:15:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:15:48] HOME_URL="https://www.centos.org/"
[2026-01-26 21:15:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:15:48] 
[2026-01-26 21:15:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:15:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:15:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:15:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:15:48] 
[2026-01-26 21:15:48] 2026-01-27 02:15:04,733 | INFO     | **************************************
[2026-01-26 21:15:48] 2026-01-27 02:15:05,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 21:15:48] 2026-01-27 02:15:05,316 | INFO     | sufficient remaining disk space (72301412352 B)
[2026-01-26 21:15:48] 2026-01-27 02:15:05,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:15:48] 2026-01-27 02:15:05,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:15:48] 2026-01-27 02:15:05,316 | INFO     | update_server=False
[2026-01-26 21:15:48] 2026-01-27 02:15:05,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:15:48] 2026-01-27 02:15:05,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:15:48] 2026-01-27 02:15:05,378 | WARNING  | process 227426 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 21:15:48] 2026-01-27 02:15:05,612 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:15:48] 2026-01-27 02:15:05,613 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983772612/payload.stdout) since it has not been created yet
[2026-01-26 21:15:48] 2026-01-27 02:15:05,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 21:15:48] 2026-01-27 02:15:05,635 | INFO     | sufficient remaining disk space (72301412352 B)
[2026-01-26 21:15:48] 2026-01-27 02:15:05,635 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 21:15:48] 2026-01-27 02:15:05,635 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983772612/HITS.48317872._001867.pool.root.1 since it does not exist
[2026-01-26 21:15:48] 2026-01-27 02:15:05,647 | INFO     | all job control threads have been joined
[2026-01-26 21:15:48] 2026-01-27 02:15:05,690 | INFO     | all data control threads have been joined
[2026-01-26 21:15:48] 2026-01-27 02:15:05,943 | INFO     | number of running child processes to parent process 227426: 1
[2026-01-26 21:15:48] 2026-01-27 02:15:05,943 | INFO     | maximum number of monitored processes: 6
[2026-01-26 21:15:48] 2026-01-27 02:15:05,943 | INFO     | aborting job monitoring since job object (job id=6983772612) has expired
[2026-01-26 21:15:48] 2026-01-27 02:15:05,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:15:48] 2026-01-27 02:15:05,943 | INFO     | will abort loop
[2026-01-26 21:15:48] 2026-01-27 02:15:06,322 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,335 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,351 | INFO     | all payload control threads have been joined
[2026-01-26 21:15:48] 2026-01-27 02:15:06,495 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,499 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,653 | INFO     | [job] control thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,712 | INFO     | [data] control thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,740 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,789 | INFO     | [job] validate thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:06,949 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:07,283 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:07,356 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:07,357 | INFO     | [payload] control thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:07,706 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:08,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:15:48] 2026-01-27 02:15:08,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:15:48] 2026-01-27 02:15:09,092 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:12,456 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:16,060 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:15:48] 2026-01-27 02:15:17,066 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:15:48] 2026-01-27 02:15:35,211 | INFO     | PID=222941 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 21:15:48] 2026-01-27 02:15:35,211 | INFO     | .. there are 10 such processes running
[2026-01-26 21:15:48] 2026-01-27 02:15:35,211 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:15:48] 2026-01-27 02:15:35,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:15:48] 2026-01-27 02:15:35,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:15:48] 2026-01-27 02:15:40,840 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:15:48] 2026-01-27 02:15:40,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313031669568)>', '<ExcThread(monitor, started 140312471131904)>']
[2026-01-26 21:15:48] 2026-01-27 02:15:41,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:15:48] 2026-01-27 02:15:41,256 | INFO     | [monitor] control thread has ended
[2026-01-26 21:15:48] 2026-01-27 02:15:45,883 | INFO     | all workflow threads have been joined
[2026-01-26 21:15:48] 2026-01-27 02:15:45,884 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:15:48] 2026-01-27 02:15:45,884 | INFO     | traces error code: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:45,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:15:48] 2026-01-27 02:15:47,300 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:15:48] 2026-01-27 02:15:47,385 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:15:48] 2026-01-27 02:15:47,404 [wrapper] pilotpid: 222941
[2026-01-26 21:15:48] 2026-01-27 02:15:47,440 [wrapper] Pilot exit status: 0
[2026-01-26 21:15:48] 2026-01-27 02:15:47,541 [wrapper] pandaids: 6983772612
[2026-01-26 21:15:48] 2026-01-27 02:15:48,100 [wrapper] cleanup supervisor_pilot  476040 222942
[2026-01-26 21:15:48] 2026-01-27 02:15:48,125 [wrapper] Test setup, not cleaning
[2026-01-26 21:15:48] 2026-01-27 02:15:48,155 [wrapper] apfmon messages muted
[2026-01-26 21:15:48] 2026-01-27 02:15:48,181 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:15:48] 2026-01-27 02:15:48,222 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:15:48]  *** Error codes and diagnostics ***
[2026-01-26 21:15:48]     "exeErrorCode": 0,
[2026-01-26 21:15:48]     "exeErrorDiag": "",
[2026-01-26 21:15:48]     "pilotErrorCode": 0,
[2026-01-26 21:15:48]     "pilotErrorDiag": "",
[2026-01-26 21:15:48]  *** Listing of results directory ***
[2026-01-26 21:15:48] total 677616
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 22:16 pilot3.tar.gz
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 22:17 queuedata.json
[2026-01-26 21:15:48] -rwx------. 1 boincer umatlas     36322 Jan 25 22:17 runpilot2-wrapper.sh
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas       100 Jan 26 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:15:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 18:54 run_atlas
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas       105 Jan 26 18:54 job.xml
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas 501471148 Jan 26 18:54 EVNT.48317869._000038.pool.root.1
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:54 start_atlas.sh
[2026-01-26 21:15:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 18:54 shared
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas    597754 Jan 26 18:54 input.tar.gz
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas         0 Jan 26 18:54 boinc_lockfile
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas      2513 Jan 26 18:54 pandaJob.out
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas        57 Jan 26 18:54 setup.sh.local
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas   1006441 Jan 26 18:54 agis_schedconf.cvmfs.json
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas   1516246 Jan 26 18:54 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas       441 Jan 26 18:54 workernode_map.json
[2026-01-26 21:15:48] drwx------. 5 boincer umatlas      4096 Jan 26 18:54 pilot3
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas      6838 Jan 26 21:10 init_data.xml
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas 185447546 Jan 26 21:14 HITS.48317872._001867.pool.root.1
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas       530 Jan 26 21:14 boinc_task_state.xml
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas        95 Jan 26 21:14 pilot_heartbeat.json
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas      1029 Jan 26 21:14 memory_monitor_summary.json
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas    366871 Jan 26 21:15 log.48317872._001867.job.log.tgz.1
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas      6373 Jan 26 21:15 heartbeat.json
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 21:15 boinc_mmap_file
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas        27 Jan 26 21:15 wrapper_checkpoint.txt
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas      6051 Jan 26 21:15 pilotlog.txt
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas   1142089 Jan 26 21:15 log.48317872._001867.job.log.1
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas       357 Jan 26 21:15 output.list
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas       620 Jan 26 21:15 runtime_log
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas   1525760 Jan 26 21:15 result.tar.gz
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas      9346 Jan 26 21:15 runtime_log.err
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas       654 Jan 26 21:15 nIwLDmwHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYK2KDmDp3BHo.diag
[2026-01-26 21:15:48] -rw-r--r--. 1 boincer umatlas     21459 Jan 26 21:15 stderr.txt
[2026-01-26 21:15:48] HITS file was successfully produced:
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas 185447546 Jan 26 21:14 shared/HITS.pool.root.1
[2026-01-26 21:15:48]  *** Contents of shared directory: ***
[2026-01-26 21:15:48] total 672920
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas 501471148 Jan 26 18:54 ATLAS.root_0
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 18:54 start_atlas.sh
[2026-01-26 21:15:48] -rw-r--r--. 2 boincer umatlas    597754 Jan 26 18:54 input.tar.gz
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas 185447546 Jan 26 21:14 HITS.pool.root.1
[2026-01-26 21:15:48] -rw-------. 1 boincer umatlas   1525760 Jan 26 21:15 result.tar.gz
21:15:49 (218638): run_atlas exited; CPU time 39675.518441
21:15:49 (218638): called boinc_finish(0)

</stderr_txt>
]]>

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