Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:55:00 (1461335): wrapper (7.7.26015): starting
17:55:00 (1461335): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 17:55:00] Arguments: --nthreads 12
[2026-01-27 17:55:00] Threads: 12
[2026-01-27 17:55:00] Checking for CVMFS
[2026-01-27 17:55:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 17:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 17:55:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 17:55:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 17:55:07] 2.13.1.0 2787 3020 72000 155594 1 50 2886658 4096001 1824 130560 0 4325366 99.953 341640 1184 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 17:55:07] CVMFS is ok
[2026-01-27 17:55:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 17:55:07] Checking for apptainer binary...
[2026-01-27 17:55:07] apptainer is not installed, using version from CVMFS
[2026-01-27 17:55:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 17:55:09] ryzen7
[2026-01-27 17:55:09] apptainer works
[2026-01-27 17:55:09] Set ATHENA_PROC_NUMBER=12
[2026-01-27 17:55:09] Set ATHENA_CORE_NUMBER=12
[2026-01-27 17:55:09] Starting ATLAS job with PandaID=6983602712
[2026-01-27 17:55:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 19:34:48]  *** The last 200 lines of the pilot log: ***
[2026-01-27 19:34:48]  replicas=None
[2026-01-27 19:34:48]  scope=mc23_13p6TeV
[2026-01-27 19:34:48]  status=None
[2026-01-27 19:34:48]  status_code=0
[2026-01-27 19:34:48]  storage_token=
[2026-01-27 19:34:48]  surl=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/log.48330021._000238.job.log.tgz.1
[2026-01-27 19:34:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/98/log.48330021._000238.job.log.tgz.1
[2026-01-27 19:34:48]  workdir=None
[2026-01-27 19:34:48] ]
[2026-01-27 19:34:48] 2026-01-27 19:33:52,875 | INFO     | transferring file log.48330021._000238.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/log.48330021._000238.job.log.tgz.1 t
[2026-01-27 19:34:48] 2026-01-27 19:33:52,875 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/log.48330021._000238.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-27 19:34:48] 2026-01-27 19:33:53,018 | INFO     | adding to output.list: log.48330021._000238.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/98/log.48330021._000238.job.log.tg
[2026-01-27 19:34:48] 2026-01-27 19:33:53,018 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 19:34:48] 2026-01-27 19:33:53,018 | INFO     | summary of transferred files:
[2026-01-27 19:34:48] 2026-01-27 19:33:53,019 | INFO     |  -- lfn=log.48330021._000238.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 19:34:48] 2026-01-27 19:33:53,019 | INFO     | stage-out finished correctly
[2026-01-27 19:34:48] 2026-01-27 19:33:54,678 | INFO     | time since job start (5783s) is within the limit (349056.0s)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,066 | WARNING  | process 1469932 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 19:34:48] 2026-01-27 19:33:55,066 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,067 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4199863 B
[2026-01-27 19:34:48] 2026-01-27 19:33:55,067 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16353 B
[2026-01-27 19:34:48] 2026-01-27 19:33:55,067 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 19:34:48] 2026-01-27 19:33:55,158 | INFO     | sufficient remaining disk space (148841168896 B)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,158 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,159 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712: 4503482 B (within 5033164800 B limit)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,159 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/HITS.48330021._000238.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,159 | INFO     | total size of present files: 0 B (workdir size: 4503482 B)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,159 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/HITS.48330021._000238.pool.root.1 since it does n
[2026-01-27 19:34:48] 2026-01-27 19:33:55,287 | INFO     | number of running child processes to parent process 1469932: 1
[2026-01-27 19:34:48] 2026-01-27 19:33:55,288 | INFO     | maximum number of monitored processes: 6
[2026-01-27 19:34:48] 2026-01-27 19:33:55,734 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 19:34:48] 2026-01-27 19:33:55,870 | INFO     | job 6983602712 has state=finished
[2026-01-27 19:34:48] 2026-01-27 19:33:55,870 | INFO     | preparing for final server update for job 6983602712 in state='finished'
[2026-01-27 19:34:48] 2026-01-27 19:33:55,870 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/jobReport.json
[2026-01-27 19:34:48] 2026-01-27 19:33:55,871 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-01-27 19:34:48] 2026-01-27 19:33:55,871 | INFO     | this job has now completed (state=finished)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,872 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,872 | INFO     | log transfer has been attempted: DONE
[2026-01-27 19:34:48] 2026-01-27 19:33:55,872 | INFO     | job 6983602712 has finished - writing final server update
[2026-01-27 19:34:48] 2026-01-27 19:33:55,872 | INFO     | total number of processed events: 400 (read)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,891 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983602712/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,892 | INFO     | extracted standard info from prmon json
[2026-01-27 19:34:48] 2026-01-27 19:33:55,892 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 19:34:48] 2026-01-27 19:33:55,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 19:34:48] 2026-01-27 19:33:55,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 19:34:48] 2026-01-27 19:33:55,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 19:34:48] 2026-01-27 19:33:55,893 | INFO     | fitting pss+swap vs Time
[2026-01-27 19:34:48] 2026-01-27 19:33:55,893 | INFO     | sum of square deviations: 197203697.5
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | sum of deviations: -7553792869.999999
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | mean x: 1769539652.5
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | mean y: 2724904.6744186045
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | intersect: 67784090972.80697
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | chi2: 0.13026997114394206
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | current memory leak: -38.30 B/s (using 86 data points, chi2=0.13)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | could have reported an average CPU frequency of 4304 MHz (7 samples)
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | ..............................
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | . Timing measurements:
[2026-01-27 19:34:48] 2026-01-27 19:33:55,902 | INFO     | . get job = 0 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . initial setup = 56 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . payload setup = 60 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . stage-in = 0 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . payload execution = 5713 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . stage-out = 1 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | . log creation = 0 s
[2026-01-27 19:34:48] 2026-01-27 19:33:55,903 | INFO     | ..............................
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | 
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | job summary report
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | --------------------------------------------------
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | PanDA job id: 6983602712
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | task id: 48330021
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | errors: (none)
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | pilot state: finished 
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | transexitcode: 0
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | exeerrorcode: 0
[2026-01-27 19:34:48] 2026-01-27 19:33:56,010 | INFO     | exeerrordiag: 
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | exitcode: 0
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | exitmsg: OK
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | cpuconsumptiontime: 29980 s
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | nevents: 400
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | neventsw: 0
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | pid: 1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | pgrp: 1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | corecount: 12
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | event service: False
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | sizes: {0: 2283974, 1: 2284435, 5777: 2311095, 5780: 2320139, 5782: 2320223, 5783: 2320417}
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | --------------------------------------------------
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | 
[2026-01-27 19:34:48] 2026-01-27 19:33:56,011 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | job 6983602712 has completed (purged errors)
[2026-01-27 19:34:48] 2026-01-27 19:33:56,151 | INFO     | overall cleanup function is called
[2026-01-27 19:34:48] 2026-01-27 19:33:57,166 | INFO     | --- collectZombieJob: --- 10, [1469932]
[2026-01-27 19:34:48] 2026-01-27 19:33:57,166 | INFO     | zombie collector waiting for pid 1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:57,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 19:34:48] 2026-01-27 19:33:57,166 | INFO     | collected zombie processes
[2026-01-27 19:34:48] 2026-01-27 19:33:57,166 | INFO     | will attempt to kill all subprocesses of pid=1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:57,285 | INFO     | process IDs to be killed: [1469932] (in reverse order)
[2026-01-27 19:34:48] 2026-01-27 19:33:57,366 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 19:34:48] 2026-01-27 19:33:57,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 19:34:48] 2026-01-27 19:33:57,368 | INFO     | did not find any defunct processes belonging to 1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:57,370 | INFO     | did not find any defunct processes belonging to 1469932
[2026-01-27 19:34:48] 2026-01-27 19:33:57,374 | INFO     | ready for new job
[2026-01-27 19:34:48] 2026-01-27 19:33:57,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 19:34:48] 2026-01-27 19:33:57,375 | INFO     | **************************************
[2026-01-27 19:34:48] 2026-01-27 19:33:57,375 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 19:34:48] 2026-01-27 19:33:57,375 | INFO     | **************************************
[2026-01-27 19:34:48] 2026-01-27 19:33:57,375 | INFO     | 
[2026-01-27 19:34:48] 2026-01-27 19:33:57,398 | INFO     | architecture information:
[2026-01-27 19:34:48] 2026-01-27 19:33:57,398 | INFO     | executing command: cat /etc/os-release
[2026-01-27 19:34:48] 2026-01-27 19:33:57,550 | INFO     | cat /etc/os-release:
[2026-01-27 19:34:48] NAME="CentOS Linux"
[2026-01-27 19:34:48] VERSION="7 (Core)"
[2026-01-27 19:34:48] ID="centos"
[2026-01-27 19:34:48] ID_LIKE="rhel fedora"
[2026-01-27 19:34:48] VERSION_ID="7"
[2026-01-27 19:34:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 19:34:48] ANSI_COLOR="0;31"
[2026-01-27 19:34:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 19:34:48] HOME_URL="https://www.centos.org/"
[2026-01-27 19:34:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 19:34:48] 
[2026-01-27 19:34:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 19:34:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 19:34:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 19:34:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 19:34:48] 
[2026-01-27 19:34:48] 2026-01-27 19:33:57,550 | INFO     | **************************************
[2026-01-27 19:34:48] 2026-01-27 19:33:58,054 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 19:34:48] 2026-01-27 19:33:58,166 | INFO     | sufficient remaining disk space (148846411776 B)
[2026-01-27 19:34:48] 2026-01-27 19:33:58,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 19:34:48] 2026-01-27 19:33:58,166 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 19:34:48] 2026-01-27 19:33:58,166 | INFO     | update_server=False
[2026-01-27 19:34:48] 2026-01-27 19:33:58,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 19:34:48] 2026-01-27 19:33:58,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 19:34:48] 2026-01-27 19:33:58,518 | INFO     | all job control threads have been joined
[2026-01-27 19:34:48] 2026-01-27 19:33:58,598 | INFO     | all payload control threads have been joined
[2026-01-27 19:34:48] 2026-01-27 19:33:58,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 19:34:48] 2026-01-27 19:33:58,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:34:48] 2026-01-27 19:33:58,806 | INFO     | aborting loop
[2026-01-27 19:34:48] 2026-01-27 19:33:58,894 | INFO     | all data control threads have been joined
[2026-01-27 19:34:48] 2026-01-27 19:33:59,170 | INFO     | [job] retrieve thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,194 | INFO     | [payload] failed_post thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,346 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,522 | INFO     | [job] control thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,602 | INFO     | [payload] control thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,706 | INFO     | [payload] validate_post thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,810 | INFO     | [job] job monitor thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,902 | INFO     | [data] control thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:33:59,978 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:00,186 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:00,206 | INFO     | [data] copytool_in thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:00,618 | INFO     | [job] validate thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:00,678 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:00,702 | INFO     | [data] copytool_out thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:01,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:34:48] 2026-01-27 19:34:02,034 | INFO     | [job] queue monitor thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:02,194 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 19:34:48] 2026-01-27 19:34:27,902 | INFO     | PID=1465442 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 19:34:48] 2026-01-27 19:34:27,902 | INFO     | .. there are 3 such processes running
[2026-01-27 19:34:48] 2026-01-27 19:34:27,903 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 19:34:48] 2026-01-27 19:34:27,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 19:34:48] 2026-01-27 19:34:27,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 19:34:48] 2026-01-27 19:34:40,994 | INFO     | [monitor] cgroup control has ended
[2026-01-27 19:34:48] 2026-01-27 19:34:41,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126900864832)>', '<ExcThread(monitor, started 140126319535872)>']
[2026-01-27 19:34:48] 2026-01-27 19:34:41,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 19:34:48] 2026-01-27 19:34:41,986 | INFO     | [monitor] control thread has ended
[2026-01-27 19:34:48] 2026-01-27 19:34:46,650 | INFO     | all workflow threads have been joined
[2026-01-27 19:34:48] 2026-01-27 19:34:46,650 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 19:34:48] 2026-01-27 19:34:46,650 | INFO     | traces error code: 0
[2026-01-27 19:34:48] 2026-01-27 19:34:46,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 19:34:48] 2026-01-27 19:34:46,882 [wrapper] ==== pilot stdout END ====
[2026-01-27 19:34:48] 2026-01-27 19:34:46,930 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 19:34:48] 2026-01-27 19:34:46,978 [wrapper] pilotpid: 1465442
[2026-01-27 19:34:48] 2026-01-27 19:34:47,014 [wrapper] Pilot exit status: 0
[2026-01-27 19:34:48] 2026-01-27 19:34:47,190 [wrapper] pandaids: 6983602712
[2026-01-27 19:34:48] 2026-01-27 19:34:47,398 [wrapper] cleanup supervisor_pilot 1501556 1465443
[2026-01-27 19:34:48] 2026-01-27 19:34:47,442 [wrapper] Test setup, not cleaning
[2026-01-27 19:34:48] 2026-01-27 19:34:47,478 [wrapper] apfmon messages muted
[2026-01-27 19:34:48] 2026-01-27 19:34:47,498 [wrapper] ==== wrapper stdout END ====
[2026-01-27 19:34:48] 2026-01-27 19:34:47,518 [wrapper] ==== wrapper stderr END ====
[2026-01-27 19:34:48]  *** Error codes and diagnostics ***
[2026-01-27 19:34:48]     "exeErrorCode": 0,
[2026-01-27 19:34:48]     "exeErrorDiag": "",
[2026-01-27 19:34:48]     "pilotErrorCode": 0,
[2026-01-27 19:34:48]     "pilotErrorDiag": "",
[2026-01-27 19:34:48]  *** Listing of results directory ***
[2026-01-27 19:34:48] total 413120
[2026-01-27 19:34:48] -rw-r--r-- 1 boinc boinc    584422 Jan 26 01:12 pilot3.tar.gz
[2026-01-27 19:34:48] -rwx------ 1 boinc boinc     36322 Jan 26 01:12 runpilot2-wrapper.sh
[2026-01-27 19:34:48] -rw-r--r-- 1 boinc boinc      5111 Jan 26 01:14 queuedata.json
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc       100 Jan 27 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 19:34:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 17:55 run_atlas
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc       105 Jan 27 17:55 job.xml
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc     15845 Jan 27 17:55 start_atlas.sh
[2026-01-27 19:34:48] drwxrwx--x 2 boinc boinc      4096 Jan 27 17:55 shared
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc    597784 Jan 27 17:55 input.tar.gz
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc      6935 Jan 27 17:55 init_data.xml
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc 247090863 Jan 27 17:55 EVNT.48330019._000010.pool.root.1
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc         0 Jan 27 17:55 boinc_setup_complete
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc         0 Jan 27 17:55 boinc_lockfile
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc      2630 Jan 27 17:55 pandaJob.out
[2026-01-27 19:34:48] -rw------- 1 boinc boinc   1005228 Jan 27 17:56 agis_schedconf.cvmfs.json
[2026-01-27 19:34:48] -rw------- 1 boinc boinc   1516246 Jan 27 17:56 agis_ddmendpoints.agis.ALL.json
[2026-01-27 19:34:48] -rw------- 1 boinc boinc       413 Jan 27 17:57 workernode_map.json
[2026-01-27 19:34:48] drwx------ 5 boinc boinc      4096 Jan 27 17:57 pilot3
[2026-01-27 19:34:48] -rw------- 1 boinc boinc 169460137 Jan 27 19:33 HITS.48330021._000238.pool.root.1
[2026-01-27 19:34:48] -rw------- 1 boinc boinc      1015 Jan 27 19:33 memory_monitor_summary.json
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc       530 Jan 27 19:33 boinc_task_state.xml
[2026-01-27 19:34:48] -rw------- 1 boinc boinc        95 Jan 27 19:33 pilot_heartbeat.json
[2026-01-27 19:34:48] -rw------- 1 boinc boinc    401375 Jan 27 19:33 log.48330021._000238.job.log.tgz.1
[2026-01-27 19:34:48] -rw------- 1 boinc boinc      6270 Jan 27 19:33 heartbeat.json
[2026-01-27 19:34:48] -rw------- 1 boinc boinc      4843 Jan 27 19:34 pilotlog.txt
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 19:34 boinc_mmap_file
[2026-01-27 19:34:48] -rw------- 1 boinc boinc    870182 Jan 27 19:34 log.48330021._000238.job.log.1
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc        27 Jan 27 19:34 wrapper_checkpoint.txt
[2026-01-27 19:34:48] -rw------- 1 boinc boinc       357 Jan 27 19:34 output.list
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc       620 Jan 27 19:34 runtime_log
[2026-01-27 19:34:48] -rw------- 1 boinc boinc   1290240 Jan 27 19:34 result.tar.gz
[2026-01-27 19:34:48] -rw------- 1 boinc boinc       649 Jan 27 19:34 Vr9KDm2KQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTm8KDmBLLXmn.diag
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc      9156 Jan 27 19:34 runtime_log.err
[2026-01-27 19:34:48] -rw-rw-r-- 1 boinc boinc     22093 Jan 27 19:34 stderr.txt
[2026-01-27 19:34:48] HITS file was successfully produced:
[2026-01-27 19:34:48] -rw------- 1 boinc boinc 169460137 Jan 27 19:33 shared/HITS.pool.root.1
[2026-01-27 19:34:48]  *** Contents of shared directory: ***
[2026-01-27 19:34:48] total 408660
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc     15845 Jan 27 17:55 start_atlas.sh
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc    597784 Jan 27 17:55 input.tar.gz
[2026-01-27 19:34:48] -rw-r--r-- 2 boinc boinc 247090863 Jan 27 17:55 ATLAS.root_0
[2026-01-27 19:34:48] -rw------- 1 boinc boinc 169460137 Jan 27 19:33 HITS.pool.root.1
[2026-01-27 19:34:48] -rw------- 1 boinc boinc   1290240 Jan 27 19:34 result.tar.gz
19:34:49 (1461335): run_atlas exited; CPU time 30012.521289
19:34:49 (1461335): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN