Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:38 (32239): wrapper (7.7.26015): starting
16:28:38 (32239): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 16:28:38] Arguments: --nthreads 12
[2026-01-26 16:28:38] Threads: 12
[2026-01-26 16:28:38] Checking for CVMFS
[2026-01-26 16:28:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:28:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:28:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:28:39] 2.11.2.0 30551 206003 95000 155562 1 52 12247529 20275200 1 130560 0 83348680 99.900 12650037 28977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 16:28:39] CVMFS is ok
[2026-01-26 16:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:28:39] Further information can be found at the LHC@home message board.
[2026-01-26 16:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:28:39] Checking for apptainer binary...
[2026-01-26 16:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:28:39] Running /usr/bin/apptainer --version
[2026-01-26 16:28:39] apptainer version 1.3.2-1.el7
[2026-01-26 16:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:28:40] c-205-16.aglt2.org
[2026-01-26 16:28:40] apptainer works
[2026-01-26 16:28:40] Set ATHENA_PROC_NUMBER=12
[2026-01-26 16:28:40] Set ATHENA_CORE_NUMBER=12
[2026-01-26 16:28:40] Starting ATLAS job with PandaID=6983771492
[2026-01-26 16:28:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:36:12]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:36:12]  scope=mc23_13p6TeV
[2026-01-26 17:36:12]  status=None
[2026-01-26 17:36:12]  status_code=0
[2026-01-26 17:36:12]  storage_token=
[2026-01-26 17:36:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983771492/log.48310670._010706.job.log.tgz.1
[2026-01-26 17:36:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/c1/log.48310670._010706.job.log.tgz.1
[2026-01-26 17:36:12]  workdir=None
[2026-01-26 17:36:12] ]
[2026-01-26 17:36:12] 2026-01-26 22:35:50,318 | INFO     | transferring file log.48310670._010706.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983771492/log.48310670._010706.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 17:36:12] 2026-01-26 22:35:50,318 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983771492/log.48310670._010706.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310670._010706.job
[2026-01-26 17:36:12] 2026-01-26 22:35:50,340 | INFO     | adding to output.list: log.48310670._010706.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/c1/log.48310670._010706.job.log.tg
[2026-01-26 17:36:12] 2026-01-26 22:35:50,341 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:36:12] 2026-01-26 22:35:50,341 | INFO     | summary of transferred files:
[2026-01-26 17:36:12] 2026-01-26 22:35:50,341 | INFO     |  -- lfn=log.48310670._010706.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:36:12] 2026-01-26 22:35:50,341 | INFO     | stage-out finished correctly
[2026-01-26 17:36:12] 2026-01-26 22:35:51,318 | INFO     | time since job start (4011s) is within the limit (349056.0s)
[2026-01-26 17:36:12] 2026-01-26 22:35:51,870 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:36:12] 2026-01-26 22:35:53,324 | INFO     | time since job start (4013s) is within the limit (349056.0s)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,571 | INFO     | job 6983771492 has state=finished
[2026-01-26 17:36:12] 2026-01-26 22:35:53,572 | INFO     | preparing for final server update for job 6983771492 in state='finished'
[2026-01-26 17:36:12] 2026-01-26 22:35:53,572 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983771492/jobReport.json
[2026-01-26 17:36:12] 2026-01-26 22:35:53,575 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 17:36:12] 2026-01-26 22:35:53,575 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,575 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,576 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:36:12] 2026-01-26 22:35:53,576 | INFO     | job 6983771492 has finished - writing final server update
[2026-01-26 17:36:12] 2026-01-26 22:35:53,576 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,579 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983771492/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,580 | INFO     | extracted standard info from prmon json
[2026-01-26 17:36:12] 2026-01-26 22:35:53,580 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:36:12] 2026-01-26 22:35:53,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:36:12] 2026-01-26 22:35:53,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:36:12] 2026-01-26 22:35:53,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:36:12] 2026-01-26 22:35:53,582 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | sum of square deviations: 63666310.0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | sum of deviations: -5184765272.0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | mean x: 1769465038.0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | mean y: 2884249.474576271
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | intersect: 144102029920.7183
[2026-01-26 17:36:12] 2026-01-26 22:35:53,583 | INFO     | chi2: 0.0609204899993748
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | current memory leak: -81.44 B/s (using 59 data points, chi2=0.06)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | could have reported an average CPU frequency of 1839 MHz (6 samples)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | ..............................
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | . Timing measurements:
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | . get job = 0 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | . initial setup = 7 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | . payload setup = 7 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,584 | INFO     | . stage-in = 0 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,585 | INFO     | . payload execution = 3986 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,585 | INFO     | . stage-out = 0 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,585 | INFO     | . log creation = 0 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,585 | INFO     | ..............................
[2026-01-26 17:36:12] 2026-01-26 22:35:53,660 | INFO     | 
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | job summary report
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | --------------------------------------------------
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | PanDA job id: 6983771492
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | task id: 48310670
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | errors: (none)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,661 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | pilot state: finished 
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | transexitcode: 0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | exeerrorcode: 0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | exeerrordiag: 
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | exitcode: 0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | exitmsg: OK
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | cpuconsumptiontime: 42887 s
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | nevents: 400
[2026-01-26 17:36:12] 2026-01-26 22:35:53,662 | INFO     | neventsw: 0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | pid: 8126
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | pgrp: 8126
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | corecount: 12
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | event service: False
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | sizes: {0: 2283983, 1: 2284189, 11: 2284217, 3997: 2310026, 3998: 2310025, 3999: 2319079, 4000: 2319263, 4002: 2319457}
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | --------------------------------------------------
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | 
[2026-01-26 17:36:12] 2026-01-26 22:35:53,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 17:36:12] 2026-01-26 22:35:53,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,688 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,688 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,688 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:36:12] 2026-01-26 22:35:53,691 | INFO     | job 6983771492 has completed (purged errors)
[2026-01-26 17:36:12] 2026-01-26 22:35:53,691 | INFO     | overall cleanup function is called
[2026-01-26 17:36:12] 2026-01-26 22:35:54,444 | INFO     | PID=3625 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 17:36:12] 2026-01-26 22:35:54,699 | INFO     | --- collectZombieJob: --- 10, [8126]
[2026-01-26 17:36:12] 2026-01-26 22:35:54,700 | INFO     | zombie collector waiting for pid 8126
[2026-01-26 17:36:12] 2026-01-26 22:35:54,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:36:12] 2026-01-26 22:35:54,700 | INFO     | collected zombie processes
[2026-01-26 17:36:12] 2026-01-26 22:35:54,700 | INFO     | will attempt to kill all subprocesses of pid=8126
[2026-01-26 17:36:12] 2026-01-26 22:35:54,790 | INFO     | process IDs to be killed: [8126] (in reverse order)
[2026-01-26 17:36:12] 2026-01-26 22:35:54,844 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:36:12] 2026-01-26 22:35:54,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:36:12] 2026-01-26 22:35:54,847 | INFO     | did not find any defunct processes belonging to 8126
[2026-01-26 17:36:12] 2026-01-26 22:35:54,851 | INFO     | did not find any defunct processes belonging to 8126
[2026-01-26 17:36:12] 2026-01-26 22:35:54,851 | INFO     | ready for new job
[2026-01-26 17:36:12] 2026-01-26 22:35:54,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:36:12] 2026-01-26 22:35:54,852 | INFO     | **************************************
[2026-01-26 17:36:12] 2026-01-26 22:35:54,853 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:36:12] 2026-01-26 22:35:54,853 | INFO     | **************************************
[2026-01-26 17:36:12] 2026-01-26 22:35:54,853 | INFO     | 
[2026-01-26 17:36:12] 2026-01-26 22:35:54,853 | INFO     | architecture information:
[2026-01-26 17:36:12] 2026-01-26 22:35:54,854 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:36:12] 2026-01-26 22:35:54,867 | INFO     | cat /etc/os-release:
[2026-01-26 17:36:12] NAME="CentOS Linux"
[2026-01-26 17:36:12] VERSION="7 (Core)"
[2026-01-26 17:36:12] ID="centos"
[2026-01-26 17:36:12] ID_LIKE="rhel fedora"
[2026-01-26 17:36:12] VERSION_ID="7"
[2026-01-26 17:36:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:36:12] ANSI_COLOR="0;31"
[2026-01-26 17:36:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:36:12] HOME_URL="https://www.centos.org/"
[2026-01-26 17:36:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:36:12] 
[2026-01-26 17:36:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:36:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:36:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:36:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:36:12] 
[2026-01-26 17:36:12] 2026-01-26 22:35:54,868 | INFO     | **************************************
[2026-01-26 17:36:12] 2026-01-26 22:35:55,337 | WARNING  | process 8126 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:36:12] 2026-01-26 22:35:55,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 17:36:12] 2026-01-26 22:35:55,386 | INFO     | sufficient remaining disk space (28935454720 B)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:36:12] 2026-01-26 22:35:55,387 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:36:12] 2026-01-26 22:35:55,387 | INFO     | update_server=False
[2026-01-26 17:36:12] 2026-01-26 22:35:55,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,388 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,388 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:36:12] 2026-01-26 22:35:55,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:36:12] 2026-01-26 22:35:55,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:12] 2026-01-26 22:35:55,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:36:12] 2026-01-26 22:35:55,421 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,422 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,422 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 17:36:12] 2026-01-26 22:35:55,423 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 17:36:12] 2026-01-26 22:35:55,423 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983771492/payload.stdout) since it has not been created yet
[2026-01-26 17:36:12] 2026-01-26 22:35:55,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 17:36:12] 2026-01-26 22:35:55,437 | INFO     | sufficient remaining disk space (28935454720 B)
[2026-01-26 17:36:12] 2026-01-26 22:35:55,437 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 17:36:12] 2026-01-26 22:35:55,437 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983771492/HITS.48310670._010706.pool.root.1 since it does not exist
[2026-01-26 17:36:12] 2026-01-26 22:35:55,531 | INFO     | number of running child processes to parent process 8126: 1
[2026-01-26 17:36:12] 2026-01-26 22:35:55,531 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:36:12] 2026-01-26 22:35:55,531 | INFO     | aborting job monitoring since job object (job id=6983771492) has expired
[2026-01-26 17:36:12] 2026-01-26 22:35:55,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:12] 2026-01-26 22:35:55,532 | INFO     | will abort loop
[2026-01-26 17:36:12] 2026-01-26 22:35:55,597 | INFO     | all job control threads have been joined
[2026-01-26 17:36:12] 2026-01-26 22:35:55,877 | INFO     | all data control threads have been joined
[2026-01-26 17:36:12] 2026-01-26 22:35:55,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:36:12] 2026-01-26 22:35:56,236 | INFO     | all payload control threads have been joined
[2026-01-26 17:36:12] 2026-01-26 22:35:56,392 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,392 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,537 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,539 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,602 | INFO     | [job] control thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,882 | INFO     | [data] control thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:56,938 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,092 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,241 | INFO     | [payload] control thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,317 | INFO     | [job] validate thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,397 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,505 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,516 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,940 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:35:57,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:36:12] 2026-01-26 22:35:57,953 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:36:01,959 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:36:12] 2026-01-26 22:36:06,329 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:36:12] 2026-01-26 22:36:07,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451655292736)>', '<ExcThread(monitor, started 140450262415104)>']
[2026-01-26 17:36:12] 2026-01-26 22:36:07,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:36:12] 2026-01-26 22:36:07,443 | INFO     | [monitor] control thread has ended
[2026-01-26 17:36:12] 2026-01-26 22:36:12,154 | INFO     | all workflow threads have been joined
[2026-01-26 17:36:12] 2026-01-26 22:36:12,162 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:36:12] 2026-01-26 22:36:12,163 | INFO     | traces error code: 0
[2026-01-26 17:36:12] 2026-01-26 22:36:12,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:36:12] 2026-01-26 22:36:12,250 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:36:12] 2026-01-26 22:36:12,254 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:36:12] 2026-01-26 22:36:12,258 [wrapper] pilotpid: 3625
[2026-01-26 17:36:12] 2026-01-26 22:36:12,263 [wrapper] Pilot exit status: 0
[2026-01-26 17:36:12] 2026-01-26 22:36:12,278 [wrapper] pandaids: 6983771492
[2026-01-26 17:36:12] 2026-01-26 22:36:12,317 [wrapper] cleanup supervisor_pilot 32338 3626
[2026-01-26 17:36:12] 2026-01-26 22:36:12,321 [wrapper] Test setup, not cleaning
[2026-01-26 17:36:12] 2026-01-26 22:36:12,324 [wrapper] apfmon messages muted
[2026-01-26 17:36:12] 2026-01-26 22:36:12,328 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:36:12] 2026-01-26 22:36:12,332 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:36:12]  *** Error codes and diagnostics ***
[2026-01-26 17:36:12]     "exeErrorCode": 0,
[2026-01-26 17:36:12]     "exeErrorDiag": "",
[2026-01-26 17:36:12]     "pilotErrorCode": 0,
[2026-01-26 17:36:12]     "pilotErrorDiag": "",
[2026-01-26 17:36:12]  *** Listing of results directory ***
[2026-01-26 17:36:12] total 672104
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 17:36:12] -rwx------ 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas       100 Jan 26 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:36:12] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 16:28 run_atlas
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas       105 Jan 26 16:28 job.xml
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas 499448008 Jan 26 16:28 EVNT.48310665._000188.pool.root.1
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 16:28 start_atlas.sh
[2026-01-26 17:36:12] drwxrwx--x 2 boincer umatlas      4096 Jan 26 16:28 shared
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas    597772 Jan 26 16:28 input.tar.gz
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas         0 Jan 26 16:28 boinc_lockfile
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas      2521 Jan 26 16:28 pandaJob.out
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas        57 Jan 26 16:28 setup.sh.local
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas   1006433 Jan 26 16:28 agis_schedconf.cvmfs.json
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas   1516246 Jan 26 16:28 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas       445 Jan 26 16:28 workernode_map.json
[2026-01-26 17:36:12] drwx------ 5 boincer umatlas      4096 Jan 26 16:29 pilot3
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 17:30 init_data.xml
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas 182926217 Jan 26 17:35 HITS.48310670._010706.pool.root.1
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas       530 Jan 26 17:35 boinc_task_state.xml
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas      1045 Jan 26 17:35 memory_monitor_summary.json
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas        95 Jan 26 17:35 pilot_heartbeat.json
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas    366314 Jan 26 17:35 log.48310670._010706.job.log.tgz.1
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas      6414 Jan 26 17:35 heartbeat.json
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 17:36 boinc_mmap_file
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas        27 Jan 26 17:36 wrapper_checkpoint.txt
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas      6027 Jan 26 17:36 pilotlog.txt
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas    590316 Jan 26 17:36 log.48310670._010706.job.log.1
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas       357 Jan 26 17:36 output.list
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas       620 Jan 26 17:36 runtime_log
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas    972800 Jan 26 17:36 result.tar.gz
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas       659 Jan 26 17:36 W5KMDmIKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQ71KDmo7RoRo.diag
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 17:36 runtime_log.err
[2026-01-26 17:36:12] -rw-r--r-- 1 boincer umatlas     22141 Jan 26 17:36 stderr.txt
[2026-01-26 17:36:12] HITS file was successfully produced:
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas 182926217 Jan 26 17:35 shared/HITS.pool.root.1
[2026-01-26 17:36:12]  *** Contents of shared directory: ***
[2026-01-26 17:36:12] total 667944
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas 499448008 Jan 26 16:28 ATLAS.root_0
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 16:28 start_atlas.sh
[2026-01-26 17:36:12] -rw-r--r-- 2 boincer umatlas    597772 Jan 26 16:28 input.tar.gz
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas 182926217 Jan 26 17:35 HITS.pool.root.1
[2026-01-26 17:36:12] -rw------- 1 boincer umatlas    972800 Jan 26 17:36 result.tar.gz
17:36:14 (32239): run_atlas exited; CPU time 42866.720571
17:36:14 (32239): called boinc_finish(0)

</stderr_txt>
]]>

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