Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:03:49 (19086): wrapper (7.7.26015): starting
16:03:49 (19086): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 16:03:49] Arguments: --nthreads 8
[2026-01-26 16:03:49] Threads: 8
[2026-01-26 16:03:49] Checking for CVMFS
[2026-01-26 16:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:03:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:03:50] 2.11.2.0 2893 154069 84948 155561 2 50 13109865 20275200 1 130560 0 40426165 99.829 10527653 29814 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 16:03:50] CVMFS is ok
[2026-01-26 16:03:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:03:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:03:50] Further information can be found at the LHC@home message board.
[2026-01-26 16:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:03:50] Checking for apptainer binary...
[2026-01-26 16:03:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:03:50] Running /usr/bin/apptainer --version
[2026-01-26 16:03:50] apptainer version 1.3.2-1.el7
[2026-01-26 16:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:03:51] c-204-22.aglt2.org
[2026-01-26 16:03:51] apptainer works
[2026-01-26 16:03:51] Set ATHENA_PROC_NUMBER=8
[2026-01-26 16:03:51] Set ATHENA_CORE_NUMBER=8
[2026-01-26 16:03:51] Starting ATLAS job with PandaID=6983449528
[2026-01-26 16:03:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:12:14 (10709): wrapper (7.7.26015): starting
18:12:14 (10709): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:12:14] Arguments: --nthreads 8
[2026-01-26 18:12:14] Threads: 8
[2026-01-26 18:12:14] This job has been restarted, cleaning up previous attempt
[2026-01-26 18:12:14] Checking for CVMFS
[2026-01-26 18:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:12:15] 2.11.2.0 2893 154198 85704 155565 0 1 13301834 20275200 1 130560 0 40478276 99.829 10532867 29818 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 18:12:15] CVMFS is ok
[2026-01-26 18:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:12:15] Further information can be found at the LHC@home message board.
[2026-01-26 18:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:12:15] Checking for apptainer binary...
[2026-01-26 18:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:12:15] Running /usr/bin/apptainer --version
[2026-01-26 18:12:15] apptainer version 1.3.2-1.el7
[2026-01-26 18:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:12:17] c-204-22.aglt2.org
[2026-01-26 18:12:17] apptainer works
[2026-01-26 18:12:17] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:12:17] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:12:17] Starting ATLAS job with PandaID=6983449528
[2026-01-26 18:12:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:54:57]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:54:57] 2026-01-27 01:54:21,804 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,804 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,804 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:54:57] 2026-01-27 01:54:21,804 | INFO     | job 6983449528 has finished - writing final server update
[2026-01-26 20:54:57] 2026-01-27 01:54:21,805 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,806 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983449528/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,807 | INFO     | extracted standard info from prmon json
[2026-01-26 20:54:57] 2026-01-27 01:54:21,807 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:54:57] 2026-01-27 01:54:21,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:54:57] 2026-01-27 01:54:21,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:54:57] 2026-01-27 01:54:21,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:54:57] 2026-01-27 01:54:21,810 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:54:57] 2026-01-27 01:54:21,811 | INFO     | sum of square deviations: 1246386160.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,811 | INFO     | sum of deviations: 24156219783.000004
[2026-01-26 20:54:57] 2026-01-27 01:54:21,812 | INFO     | mean x: 1769474002.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,812 | INFO     | mean y: 2502411.8050314467
[2026-01-26 20:54:57] 2026-01-27 01:54:21,812 | INFO     | intersect: -34291686872.69135
[2026-01-26 20:54:57] 2026-01-27 01:54:21,812 | INFO     | chi2: 1.412276887288846
[2026-01-26 20:54:57] 2026-01-27 01:54:21,813 | INFO     | sum of square deviations: 1132458442.5
[2026-01-26 20:54:57] 2026-01-27 01:54:21,813 | INFO     | sum of deviations: 23180009882.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,813 | INFO     | mean x: 1769473849.5
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | mean y: 2501105.350649351
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | intersect: -36216418528.29462
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | chi2: 1.413340035339193
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | current chi2=1.413340035339193 (change=-0.07527900937243524 %)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | right removable region: 153
[2026-01-26 20:54:57] 2026-01-27 01:54:21,814 | INFO     | sum of square deviations: 1132458442.5
[2026-01-26 20:54:57] 2026-01-27 01:54:21,815 | INFO     | sum of deviations: 443946165.9999999
[2026-01-26 20:54:57] 2026-01-27 01:54:21,815 | INFO     | mean x: 1769474154.5
[2026-01-26 20:54:57] 2026-01-27 01:54:21,816 | INFO     | mean y: 2533744.935064935
[2026-01-26 20:54:57] 2026-01-27 01:54:21,816 | INFO     | intersect: -691135212.1281135
[2026-01-26 20:54:57] 2026-01-27 01:54:21,816 | INFO     | chi2: 0.06849768520410839
[2026-01-26 20:54:57] 2026-01-27 01:54:21,816 | INFO     | current chi2=0.06849768520410839 (change=95.1498402458739 %)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,816 | INFO     | sum of square deviations: 1025693650.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,817 | INFO     | sum of deviations: -4347919326.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,817 | INFO     | mean x: 1769474307.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,817 | INFO     | mean y: 2540491.5704697985
[2026-01-26 20:54:57] 2026-01-27 01:54:21,817 | INFO     | intersect: 7503348882.3270645
[2026-01-26 20:54:57] 2026-01-27 01:54:21,818 | INFO     | chi2: 0.007375684293436869
[2026-01-26 20:54:57] 2026-01-27 01:54:21,818 | INFO     | current chi2=0.007375684293436869 (change=89.23221380188409 %)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,818 | INFO     | sum of square deviations: 925859220.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,819 | INFO     | sum of deviations: -4777238058.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,819 | INFO     | mean x: 1769474459.5
[2026-01-26 20:54:57] 2026-01-27 01:54:21,819 | INFO     | mean y: 2541137.8333333335
[2026-01-26 20:54:57] 2026-01-27 01:54:21,819 | INFO     | intersect: 9132655682.226357
[2026-01-26 20:54:57] 2026-01-27 01:54:21,819 | INFO     | chi2: 0.005979029631675067
[2026-01-26 20:54:57] 2026-01-27 01:54:21,820 | INFO     | current chi2=0.005979029631675067 (change=18.93593334796871 %)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,820 | INFO     | left removable region: 30
[2026-01-26 20:54:57] 2026-01-27 01:54:21,820 | INFO     | sum of square deviations: 576985702.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | sum of deviations: -3115755133.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | mean x: 1769474734.0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | mean y: 2537786.5528455283
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | intersect: 9557800535.809515
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | chi2: 0.005262235332553654
[2026-01-26 20:54:57] 2026-01-27 01:54:21,821 | INFO     | current memory leak: -5.40 B/s (using 123 data points, chi2=0.01)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | could have reported an average CPU frequency of 1762 MHz (9 samples)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | ..............................
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | . Timing measurements:
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | . get job = 0 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | . initial setup = 1 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | . payload setup = 8 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,822 | INFO     | . stage-in = 0 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,823 | INFO     | . payload execution = 9676 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,823 | INFO     | . stage-out = 2 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,823 | INFO     | . log creation = 0 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,823 | INFO     | ..............................
[2026-01-26 20:54:57] 2026-01-27 01:54:21,907 | INFO     | 
[2026-01-26 20:54:57] 2026-01-27 01:54:21,907 | INFO     | job summary report
[2026-01-26 20:54:57] 2026-01-27 01:54:21,907 | INFO     | --------------------------------------------------
[2026-01-26 20:54:57] 2026-01-27 01:54:21,908 | INFO     | PanDA job id: 6983449528
[2026-01-26 20:54:57] 2026-01-27 01:54:21,908 | INFO     | task id: 48329421
[2026-01-26 20:54:57] 2026-01-27 01:54:21,908 | INFO     | errors: (none)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,908 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:54:57] 2026-01-27 01:54:21,908 | INFO     | pilot state: finished 
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | transexitcode: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | exeerrorcode: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | exeerrordiag: 
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | exitcode: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | exitmsg: OK
[2026-01-26 20:54:57] 2026-01-27 01:54:21,909 | INFO     | cpuconsumptiontime: 72786 s
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | nevents: 400
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | neventsw: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | pid: 17160
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | pgrp: 17160
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | corecount: 8
[2026-01-26 20:54:57] 2026-01-27 01:54:21,910 | INFO     | event service: False
[2026-01-26 20:54:57] 2026-01-27 01:54:21,911 | INFO     | sizes: {0: 2283258, 1: 2284376, 12: 2284376, 9688: 2312899, 9690: 2321897, 9693: 2321953, 9694: 2322339}
[2026-01-26 20:54:57] 2026-01-27 01:54:21,911 | INFO     | --------------------------------------------------
[2026-01-26 20:54:57] 2026-01-27 01:54:21,911 | INFO     | 
[2026-01-26 20:54:57] 2026-01-27 01:54:21,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 20:54:57] 2026-01-27 01:54:21,940 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,941 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,941 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,941 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,944 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,944 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:54:57] 2026-01-27 01:54:21,944 | INFO     | job 6983449528 has completed (purged errors)
[2026-01-26 20:54:57] 2026-01-27 01:54:21,944 | INFO     | overall cleanup function is called
[2026-01-26 20:54:57] 2026-01-27 01:54:22,952 | INFO     | --- collectZombieJob: --- 10, [17160]
[2026-01-26 20:54:57] 2026-01-27 01:54:22,953 | INFO     | zombie collector waiting for pid 17160
[2026-01-26 20:54:57] 2026-01-27 01:54:22,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:54:57] 2026-01-27 01:54:22,953 | INFO     | collected zombie processes
[2026-01-26 20:54:57] 2026-01-27 01:54:22,953 | INFO     | will attempt to kill all subprocesses of pid=17160
[2026-01-26 20:54:57] 2026-01-27 01:54:23,043 | INFO     | process IDs to be killed: [17160] (in reverse order)
[2026-01-26 20:54:57] 2026-01-27 01:54:23,108 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:54:57] 2026-01-27 01:54:23,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:54:57] 2026-01-27 01:54:23,113 | INFO     | did not find any defunct processes belonging to 17160
[2026-01-26 20:54:57] 2026-01-27 01:54:23,117 | INFO     | did not find any defunct processes belonging to 17160
[2026-01-26 20:54:57] 2026-01-27 01:54:23,117 | INFO     | ready for new job
[2026-01-26 20:54:57] 2026-01-27 01:54:23,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:54:57] 2026-01-27 01:54:23,119 | INFO     | **************************************
[2026-01-26 20:54:57] 2026-01-27 01:54:23,119 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:54:57] 2026-01-27 01:54:23,119 | INFO     | **************************************
[2026-01-26 20:54:57] 2026-01-27 01:54:23,120 | INFO     | 
[2026-01-26 20:54:57] 2026-01-27 01:54:23,120 | INFO     | architecture information:
[2026-01-26 20:54:57] 2026-01-27 01:54:23,121 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:54:57] 2026-01-27 01:54:23,138 | INFO     | cat /etc/os-release:
[2026-01-26 20:54:57] NAME="CentOS Linux"
[2026-01-26 20:54:57] VERSION="7 (Core)"
[2026-01-26 20:54:57] ID="centos"
[2026-01-26 20:54:57] ID_LIKE="rhel fedora"
[2026-01-26 20:54:57] VERSION_ID="7"
[2026-01-26 20:54:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:54:57] ANSI_COLOR="0;31"
[2026-01-26 20:54:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:54:57] HOME_URL="https://www.centos.org/"
[2026-01-26 20:54:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:54:57] 
[2026-01-26 20:54:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:54:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:54:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:54:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:54:57] 
[2026-01-26 20:54:57] 2026-01-27 01:54:23,139 | INFO     | **************************************
[2026-01-26 20:54:57] 2026-01-27 01:54:23,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 20:54:57] 2026-01-27 01:54:23,662 | INFO     | sufficient remaining disk space (18428723200 B)
[2026-01-26 20:54:57] 2026-01-27 01:54:23,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:54:57] 2026-01-27 01:54:23,663 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:54:57] 2026-01-27 01:54:23,663 | INFO     | update_server=False
[2026-01-26 20:54:57] 2026-01-27 01:54:23,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:54:57] 2026-01-27 01:54:23,664 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 20:54:57] 2026-01-27 01:54:23,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:54:57] 2026-01-27 01:54:23,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:54:57] 2026-01-27 01:54:23,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:54:57] 2026-01-27 01:54:23,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:54:57] 2026-01-27 01:54:23,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:54:57] 2026-01-27 01:54:23,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:54:57] 2026-01-27 01:54:23,742 | INFO     | aborting loop
[2026-01-26 20:54:57] 2026-01-27 01:54:24,000 | INFO     | all data control threads have been joined
[2026-01-26 20:54:57] 2026-01-27 01:54:24,095 | INFO     | all payload control threads have been joined
[2026-01-26 20:54:57] 2026-01-27 01:54:24,187 | INFO     | all job control threads have been joined
[2026-01-26 20:54:57] 2026-01-27 01:54:24,669 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:24,671 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:24,748 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:24,766 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:24,823 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,006 | INFO     | [data] control thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,099 | INFO     | [payload] control thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,138 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,193 | INFO     | [job] control thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,545 | INFO     | [job] validate thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,671 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,716 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,866 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:25,866 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:27,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:54:57] 2026-01-27 01:54:31,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:54:57] 2026-01-27 01:54:51,661 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:54:57] 2026-01-27 01:54:52,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671391840064)>', '<ExcThread(monitor, started 139670474168064)>']
[2026-01-26 20:54:57] 2026-01-27 01:54:52,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:54:57] 2026-01-27 01:54:52,804 | INFO     | [monitor] control thread has ended
[2026-01-26 20:54:57] 2026-01-27 01:54:57,275 | INFO     | all workflow threads have been joined
[2026-01-26 20:54:57] 2026-01-27 01:54:57,282 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:54:57] 2026-01-27 01:54:57,283 | INFO     | traces error code: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:57,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:54:57] 2026-01-27 01:54:57,401 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:54:57] 2026-01-27 01:54:57,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:54:57] 2026-01-27 01:54:57,411 [wrapper] pilotpid: 14778
[2026-01-26 20:54:57] 2026-01-27 01:54:57,415 [wrapper] Pilot exit status: 0
[2026-01-26 20:54:57] 2026-01-27 01:54:57,434 [wrapper] pandaids: 6983449528 6983449528
[2026-01-26 20:54:57] 2026-01-27 01:54:57,480 [wrapper] cleanup supervisor_pilot  7837 14779
[2026-01-26 20:54:57] 2026-01-27 01:54:57,485 [wrapper] Test setup, not cleaning
[2026-01-26 20:54:57] 2026-01-27 01:54:57,490 [wrapper] apfmon messages muted
[2026-01-26 20:54:57] 2026-01-27 01:54:57,495 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:54:57] 2026-01-27 01:54:57,500 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:54:57]  *** Error codes and diagnostics ***
[2026-01-26 20:54:57]     "exeErrorCode": 0,
[2026-01-26 20:54:57]     "exeErrorDiag": "",
[2026-01-26 20:54:57]     "pilotErrorCode": 0,
[2026-01-26 20:54:57]     "pilotErrorDiag": "",
[2026-01-26 20:54:57]  *** Listing of results directory ***
[2026-01-26 20:54:57] total 728764
[2026-01-26 20:54:57] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 20:54:57] -rwx------ 1 boincer umatlas     36322 Jan 25 15:52 runpilot2-wrapper.sh
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:54 queuedata.json
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas       100 Jan 26 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:54:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 16:03 run_atlas
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas       105 Jan 26 16:03 job.xml
[2026-01-26 20:54:57] -rw-r--r-- 3 boincer umatlas 273131555 Jan 26 16:03 EVNT.48329419._000001.pool.root.1
[2026-01-26 20:54:57] -rw-r--r-- 3 boincer umatlas 273131555 Jan 26 16:03 ATLAS.root_0
[2026-01-26 20:54:57] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 16:03 start_atlas.sh
[2026-01-26 20:54:57] drwxrwx--x 2 boincer umatlas      4096 Jan 26 16:03 shared
[2026-01-26 20:54:57] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 16:03 input.tar.gz
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas         0 Jan 26 16:03 boinc_lockfile
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas      2603 Jan 26 18:12 pandaJob.out
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas        57 Jan 26 18:12 setup.sh.local
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas   1006433 Jan 26 18:12 agis_schedconf.cvmfs.json
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas       433 Jan 26 18:12 workernode_map.json
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas      5912 Jan 26 20:45 init_data.xml
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas 192558680 Jan 26 20:53 HITS.48329421._000005.pool.root.1
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas       532 Jan 26 20:53 boinc_task_state.xml
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas        96 Jan 26 20:53 pilot_heartbeat.json
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas      1049 Jan 26 20:54 memory_monitor_summary.json
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas   1516246 Jan 26 20:54 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas    387283 Jan 26 20:54 log.48329421._000005.job.log.tgz.1
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas      6389 Jan 26 20:54 heartbeat.json
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 20:54 boinc_mmap_file
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas        29 Jan 26 20:54 wrapper_checkpoint.txt
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas      4548 Jan 26 20:54 pilotlog.txt
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas   1358314 Jan 26 20:54 log.48329421._000005.job.log.1
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas       357 Jan 26 20:54 output.list
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas       620 Jan 26 20:54 runtime_log
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas   1761280 Jan 26 20:54 result.tar.gz
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas      9426 Jan 26 20:54 runtime_log.err
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas       785 Jan 26 20:54 6RALDmeGM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoR8KDmIXrH2n.diag
[2026-01-26 20:54:57] -rw-r--r-- 1 boincer umatlas     23107 Jan 26 20:54 stderr.txt
[2026-01-26 20:54:57] HITS file was successfully produced:
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas 192558680 Jan 26 20:53 shared/HITS.pool.root.1
[2026-01-26 20:54:57]  *** Contents of shared directory: ***
[2026-01-26 20:54:57] total 457104
[2026-01-26 20:54:57] -rw-r--r-- 3 boincer umatlas 273131555 Jan 26 16:03 ATLAS.root_0
[2026-01-26 20:54:57] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 16:03 start_atlas.sh
[2026-01-26 20:54:57] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 16:03 input.tar.gz
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas 192558680 Jan 26 20:53 HITS.pool.root.1
[2026-01-26 20:54:57] -rw------- 1 boincer umatlas   1761280 Jan 26 20:54 result.tar.gz
20:54:59 (10709): run_atlas exited; CPU time 72719.540285
20:54:59 (10709): called boinc_finish(0)

</stderr_txt>
]]>

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