Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:13 (187070): wrapper (7.7.26015): starting
16:33:13 (187070): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 16:33:13] Arguments: --nthreads 8
[2026-01-26 16:33:13] Threads: 8
[2026-01-26 16:33:13] Checking for CVMFS
[2026-01-26 16:33:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:33:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:33:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:33:15] 2.13.3.0 11830 118300 359488 155562 2 342 28309038 32935937 25975 16776704 0 467375673 99.491 626268441 33640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 16:33:15] CVMFS is ok
[2026-01-26 16:33:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:33:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:33:15] Further information can be found at the LHC@home message board.
[2026-01-26 16:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:33:15] Checking for apptainer binary...
[2026-01-26 16:33:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:33:15] Running /usr/bin/apptainer --version
[2026-01-26 16:33:15] apptainer version 1.4.5-2.el9
[2026-01-26 16:33:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:33:36] c6-8-25-1.aglt2.org
[2026-01-26 16:33:36] apptainer works
[2026-01-26 16:33:36] Set ATHENA_PROC_NUMBER=8
[2026-01-26 16:33:36] Set ATHENA_CORE_NUMBER=8
[2026-01-26 16:33:36] Starting ATLAS job with PandaID=6983772364
[2026-01-26 16:33:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:07:51]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:07:51] 2026-01-27 01:07:15,796 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:07:51] 2026-01-27 01:07:15,817 | INFO     | job 6983772364 has finished - writing final server update
[2026-01-26 20:07:51] 2026-01-27 01:07:15,817 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983772364/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,890 | INFO     | extracted standard info from prmon json
[2026-01-26 20:07:51] 2026-01-27 01:07:15,891 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:07:51] 2026-01-27 01:07:15,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:07:51] 2026-01-27 01:07:15,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:07:51] 2026-01-27 01:07:15,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:07:51] 2026-01-27 01:07:15,919 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:07:51] 2026-01-27 01:07:15,919 | INFO     | sum of square deviations: 2790279080.110585
[2026-01-26 20:07:51] 2026-01-27 01:07:15,921 | INFO     | sum of deviations: -25677062911.826927
[2026-01-26 20:07:51] 2026-01-27 01:07:15,921 | INFO     | mean x: 1769469690.7932692
[2026-01-26 20:07:51] 2026-01-27 01:07:15,921 | INFO     | mean y: 2522356.980769231
[2026-01-26 20:07:51] 2026-01-27 01:07:15,921 | INFO     | intersect: 16285762587.298172
[2026-01-26 20:07:51] 2026-01-27 01:07:15,921 | INFO     | chi2: 3.0477702080365403
[2026-01-26 20:07:51] 2026-01-27 01:07:15,922 | INFO     | sum of square deviations: 2593828023.428557
[2026-01-26 20:07:51] 2026-01-27 01:07:15,941 | INFO     | sum of deviations: -11067380018.14287
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | mean x: 1769469538.2857144
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | mean y: 2533490.4679802954
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | intersect: 7552529725.318668
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | chi2: 2.279796176956057
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | current chi2=2.279796176956057 (change=25.197898091379855 %)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,942 | INFO     | sum of square deviations: 2406856160.510091
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | sum of deviations: -10514924124.409077
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | mean x: 1769469385.7929294
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | mean y: 2533941.1363636362
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | intersect: 7732882200.973464
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | chi2: 2.2790753095881153
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | current chi2=2.2790753095881153 (change=0.031619816509396714 %)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,944 | INFO     | right removable region: 197
[2026-01-26 20:07:51] 2026-01-27 01:07:15,945 | INFO     | sum of square deviations: 2593854015.852199
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | sum of deviations: -65098886984.79802
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | mean x: 1769469843.2906404
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | mean y: 2552704.369458128
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | intersect: 44411573662.14311
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | chi2: 1.1919142810191656
[2026-01-26 20:07:51] 2026-01-27 01:07:15,946 | INFO     | current chi2=1.1919142810191656 (change=60.89225237925564 %)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,947 | INFO     | sum of square deviations: 2406883615.6616077
[2026-01-26 20:07:51] 2026-01-27 01:07:15,948 | INFO     | sum of deviations: -68421393773.45959
[2026-01-26 20:07:51] 2026-01-27 01:07:15,948 | INFO     | mean x: 1769469995.7828283
[2026-01-26 20:07:51] 2026-01-27 01:07:15,949 | INFO     | mean y: 2555378.5707070706
[2026-01-26 20:07:51] 2026-01-27 01:07:15,950 | INFO     | intersect: 50303950329.277115
[2026-01-26 20:07:51] 2026-01-27 01:07:15,950 | INFO     | chi2: 1.1403635053012506
[2026-01-26 20:07:51] 2026-01-27 01:07:15,950 | INFO     | current chi2=1.1403635053012506 (change=4.325040528404079 %)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,950 | INFO     | left removable region: 20
[2026-01-26 20:07:51] 2026-01-27 01:07:15,950 | INFO     | sum of square deviations: 1719388623.875706
[2026-01-26 20:07:51] 2026-01-27 01:07:15,951 | INFO     | sum of deviations: -34890059418.1243
[2026-01-26 20:07:51] 2026-01-27 01:07:15,951 | INFO     | mean x: 1769469965.282486
[2026-01-26 20:07:51] 2026-01-27 01:07:15,951 | INFO     | mean y: 2552978.2824858758
[2026-01-26 20:07:51] 2026-01-27 01:07:15,952 | INFO     | intersect: 35908869543.370575
[2026-01-26 20:07:51] 2026-01-27 01:07:15,952 | INFO     | chi2: 0.2885181002845492
[2026-01-26 20:07:51] 2026-01-27 01:07:15,952 | INFO     | current memory leak: -20.29 B/s (using 177 data points, chi2=0.29)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,952 | INFO     | could have reported an average CPU frequency of 2588 MHz (11 samples)
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | ..............................
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . Timing measurements:
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . get job = 0 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . initial setup = 30 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . payload setup = 38 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . stage-in = 0 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . payload execution = 12675 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . stage-out = 4 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | . log creation = 0 s
[2026-01-26 20:07:51] 2026-01-27 01:07:15,953 | INFO     | ..............................
[2026-01-26 20:07:51] 2026-01-27 01:07:16,091 | INFO     | time since job start (12730s) is within the limit (349056.0s)
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | 
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | job summary report
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | --------------------------------------------------
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | PanDA job id: 6983772364
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | task id: 48317872
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | errors: (none)
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:07:51] 2026-01-27 01:07:16,307 | INFO     | pilot state: finished 
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | transexitcode: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | exeerrorcode: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | exeerrordiag: 
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | exitcode: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | exitmsg: OK
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | cpuconsumptiontime: 42262 s
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | nevents: 400
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | neventsw: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | pid: 198181
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | pgrp: 198181
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | corecount: 8
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | event service: False
[2026-01-26 20:07:51] 2026-01-27 01:07:16,308 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284286, 3: 2284286, 12718: 2314230, 12719: 2314229, 12724: 2323411, 12725: 2323467, 12726: 2323661}
[2026-01-26 20:07:51] 2026-01-27 01:07:16,309 | INFO     | --------------------------------------------------
[2026-01-26 20:07:51] 2026-01-27 01:07:16,309 | INFO     | 
[2026-01-26 20:07:51] 2026-01-27 01:07:16,309 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 20:07:51] 2026-01-27 01:07:16,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:07:51] 2026-01-27 01:07:16,398 | INFO     | job 6983772364 has completed (purged errors)
[2026-01-26 20:07:51] 2026-01-27 01:07:16,399 | INFO     | overall cleanup function is called
[2026-01-26 20:07:51] 2026-01-27 01:07:17,411 | INFO     | --- collectZombieJob: --- 10, [198181]
[2026-01-26 20:07:51] 2026-01-27 01:07:17,412 | INFO     | zombie collector waiting for pid 198181
[2026-01-26 20:07:51] 2026-01-27 01:07:17,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:07:51] 2026-01-27 01:07:17,412 | INFO     | collected zombie processes
[2026-01-26 20:07:51] 2026-01-27 01:07:17,412 | INFO     | will attempt to kill all subprocesses of pid=198181
[2026-01-26 20:07:51] 2026-01-27 01:07:19,129 | INFO     | process IDs to be killed: [198181] (in reverse order)
[2026-01-26 20:07:51] 2026-01-27 01:07:19,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:07:51] 2026-01-27 01:07:19,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:07:51] 2026-01-27 01:07:19,320 | INFO     | did not find any defunct processes belonging to 198181
[2026-01-26 20:07:51] 2026-01-27 01:07:19,352 | INFO     | did not find any defunct processes belonging to 198181
[2026-01-26 20:07:51] 2026-01-27 01:07:19,352 | INFO     | ready for new job
[2026-01-26 20:07:51] 2026-01-27 01:07:19,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:07:51] 2026-01-27 01:07:19,358 | INFO     | **************************************
[2026-01-26 20:07:51] 2026-01-27 01:07:19,358 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:07:51] 2026-01-27 01:07:19,358 | INFO     | **************************************
[2026-01-26 20:07:51] 2026-01-27 01:07:19,358 | INFO     | 
[2026-01-26 20:07:51] 2026-01-27 01:07:19,368 | INFO     | architecture information:
[2026-01-26 20:07:51] 2026-01-27 01:07:19,372 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:07:51] 2026-01-27 01:07:19,414 | INFO     | cat /etc/os-release:
[2026-01-26 20:07:51] NAME="CentOS Linux"
[2026-01-26 20:07:51] VERSION="7 (Core)"
[2026-01-26 20:07:51] ID="centos"
[2026-01-26 20:07:51] ID_LIKE="rhel fedora"
[2026-01-26 20:07:51] VERSION_ID="7"
[2026-01-26 20:07:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:07:51] ANSI_COLOR="0;31"
[2026-01-26 20:07:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:07:51] HOME_URL="https://www.centos.org/"
[2026-01-26 20:07:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:07:51] 
[2026-01-26 20:07:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:07:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:07:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:07:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:07:51] 
[2026-01-26 20:07:51] 2026-01-27 01:07:19,415 | INFO     | **************************************
[2026-01-26 20:07:51] 2026-01-27 01:07:19,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | INFO     | sufficient remaining disk space (71857864704 B)
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | INFO     | update_server=False
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:07:51] 2026-01-27 01:07:20,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:07:51] 2026-01-27 01:07:20,066 | INFO     | aborting loop
[2026-01-26 20:07:51] 2026-01-27 01:07:20,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:07:51] 2026-01-27 01:07:20,335 | INFO     | all payload control threads have been joined
[2026-01-26 20:07:51] 2026-01-27 01:07:20,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:07:51] 2026-01-27 01:07:20,977 | INFO     | all data control threads have been joined
[2026-01-26 20:07:51] 2026-01-27 01:07:21,071 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,072 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,149 | INFO     | [job] validate thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,244 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:07:51] 2026-01-27 01:07:21,343 | INFO     | [payload] control thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,451 | INFO     | all job control threads have been joined
[2026-01-26 20:07:51] 2026-01-27 01:07:21,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,489 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,959 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:21,985 | INFO     | [data] control thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,082 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,344 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,395 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,412 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,459 | INFO     | [job] control thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:22,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:24,583 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:07:51] 2026-01-27 01:07:28,392 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:07:51] 2026-01-27 01:07:30,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209400334144)>', '<ExcThread(monitor, started 140208603395840)>']
[2026-01-26 20:07:51] 2026-01-27 01:07:35,083 | INFO     | all workflow threads have been joined
[2026-01-26 20:07:51] 2026-01-27 01:07:35,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:07:51] 2026-01-27 01:07:35,084 | INFO     | traces error code: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:35,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:07:51] 2026-01-27 01:07:50,242 | INFO     | PID=192606 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 20:07:51] 2026-01-27 01:07:50,247 | INFO     | .. there are 23 such processes running
[2026-01-26 20:07:51] 2026-01-27 01:07:50,247 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:07:51] 2026-01-27 01:07:50,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:07:51] 2026-01-27 01:07:50,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:07:51] 2026-01-27 01:07:50,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:07:51] 2026-01-27 01:07:50,248 | INFO     | [monitor] control thread has ended
[2026-01-26 20:07:51] 2026-01-27 01:07:50,603 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:07:51] 2026-01-27 01:07:50,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:07:51] 2026-01-27 01:07:50,640 [wrapper] pilotpid: 192606
[2026-01-26 20:07:51] 2026-01-27 01:07:50,658 [wrapper] Pilot exit status: 0
[2026-01-26 20:07:51] 2026-01-27 01:07:50,713 [wrapper] pandaids: 6983772364
[2026-01-26 20:07:51] 2026-01-27 01:07:50,802 [wrapper] cleanup supervisor_pilot  779903 192607
[2026-01-26 20:07:51] 2026-01-27 01:07:50,808 [wrapper] Test setup, not cleaning
[2026-01-26 20:07:51] 2026-01-27 01:07:50,823 [wrapper] apfmon messages muted
[2026-01-26 20:07:51] 2026-01-27 01:07:50,839 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:07:51] 2026-01-27 01:07:50,865 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:07:51]  *** Error codes and diagnostics ***
[2026-01-26 20:07:51]     "exeErrorCode": 0,
[2026-01-26 20:07:51]     "exeErrorDiag": "",
[2026-01-26 20:07:51]     "pilotErrorCode": 0,
[2026-01-26 20:07:51]     "pilotErrorDiag": "",
[2026-01-26 20:07:51]  *** Listing of results directory ***
[2026-01-26 20:07:51] total 667572
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 22:16 pilot3.tar.gz
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 22:17 queuedata.json
[2026-01-26 20:07:51] -rwx------. 1 boincer umatlas     36322 Jan 25 22:17 runpilot2-wrapper.sh
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas       100 Jan 26 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:07:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 16:33 run_atlas
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas       105 Jan 26 16:33 job.xml
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas 494221727 Jan 26 16:33 EVNT.48317869._000033.pool.root.1
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:33 start_atlas.sh
[2026-01-26 20:07:51] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 16:33 shared
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas    597751 Jan 26 16:33 input.tar.gz
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas         0 Jan 26 16:33 boinc_lockfile
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas      2513 Jan 26 16:33 pandaJob.out
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas        57 Jan 26 16:33 setup.sh.local
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas   1006433 Jan 26 16:34 agis_schedconf.cvmfs.json
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas       442 Jan 26 16:35 workernode_map.json
[2026-01-26 20:07:51] drwx------. 5 boincer umatlas      4096 Jan 26 16:35 pilot3
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas      6876 Jan 26 20:04 init_data.xml
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas 181309495 Jan 26 20:05 HITS.48317872._001619.pool.root.1
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas       531 Jan 26 20:05 boinc_task_state.xml
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas      1044 Jan 26 20:07 memory_monitor_summary.json
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas   1516246 Jan 26 20:07 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas    425012 Jan 26 20:07 log.48317872._001619.job.log.tgz.1
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas      6395 Jan 26 20:07 heartbeat.json
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 20:07 boinc_mmap_file
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas        28 Jan 26 20:07 wrapper_checkpoint.txt
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas        95 Jan 26 20:07 pilot_heartbeat.json
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas       822 Jan 26 20:07 pilotlog.txt
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas   1633393 Jan 26 20:07 log.48317872._001619.job.log.1
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas       357 Jan 26 20:07 output.list
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas       620 Jan 26 20:07 runtime_log
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas   2078720 Jan 26 20:07 result.tar.gz
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas      9347 Jan 26 20:07 runtime_log.err
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas       655 Jan 26 20:07 gEDODmlHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEs8KDmFD7Z3n.diag
[2026-01-26 20:07:51] -rw-r--r--. 1 boincer umatlas     20909 Jan 26 20:07 stderr.txt
[2026-01-26 20:07:51] HITS file was successfully produced:
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas 181309495 Jan 26 20:05 shared/HITS.pool.root.1
[2026-01-26 20:07:51]  *** Contents of shared directory: ***
[2026-01-26 20:07:51] total 662344
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas 494221727 Jan 26 16:33 ATLAS.root_0
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:33 start_atlas.sh
[2026-01-26 20:07:51] -rw-r--r--. 2 boincer umatlas    597751 Jan 26 16:33 input.tar.gz
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas 181309495 Jan 26 20:05 HITS.pool.root.1
[2026-01-26 20:07:51] -rw-------. 1 boincer umatlas   2078720 Jan 26 20:07 result.tar.gz
20:07:53 (187070): run_atlas exited; CPU time 42832.798483
20:07:53 (187070): called boinc_finish(0)

</stderr_txt>
]]>

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