Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:12:44 (691783): wrapper (7.7.26015): starting
16:12:44 (691783): wrapper: running run_atlas (--nthreads 10)
[2026-01-26 16:12:44] Arguments: --nthreads 10
[2026-01-26 16:12:44] Threads: 10
[2026-01-26 16:12:44] Checking for CVMFS
[2026-01-26 16:12:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:12:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:12:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:12:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:12:46] 2.13.3.0 10480 46514 253132 155561 3 476 29035046 40960000 11718 16776704 0 35920284 99.558 48695362 32440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 16:12:46] CVMFS is ok
[2026-01-26 16:12:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:12:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:12:46] Further information can be found at the LHC@home message board.
[2026-01-26 16:12:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:12:46] Checking for apptainer binary...
[2026-01-26 16:12:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:12:46] Running /usr/bin/apptainer --version
[2026-01-26 16:12:47] apptainer version 1.4.5-2.el9
[2026-01-26 16:12:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:12:48] c-211-12.aglt2.org
[2026-01-26 16:12:48] apptainer works
[2026-01-26 16:12:48] Set ATHENA_PROC_NUMBER=10
[2026-01-26 16:12:48] Set ATHENA_CORE_NUMBER=10
[2026-01-26 16:12:48] Starting ATLAS job with PandaID=6983773317
[2026-01-26 16:12:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:01:00]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:01:00] 2026-01-27 03:27:24,626 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6983773317/jobReport.json
[2026-01-27 00:01:00] 2026-01-27 03:27:24,672 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-27 00:01:00] 2026-01-27 03:27:24,672 | INFO     | this job has now completed (state=finished)
[2026-01-27 00:01:00] 2026-01-27 03:27:24,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 00:01:00] 2026-01-27 03:27:24,673 | INFO     | log transfer has been attempted: DONE
[2026-01-27 00:01:00] 2026-01-27 03:27:24,673 | INFO     | job 6983773317 has finished - writing final server update
[2026-01-27 00:01:00] 2026-01-27 03:27:24,673 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:01:00] 2026-01-27 03:27:24,708 | INFO     | monitor loop #1231: job 0:6983773317 is in state 'finished'
[2026-01-27 00:01:00] 2026-01-27 03:27:24,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:01:00] 2026-01-27 03:27:24,767 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983773317/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:01:00] 2026-01-27 03:27:24,810 | INFO     | extracted standard info from prmon json
[2026-01-27 00:01:00] 2026-01-27 03:27:24,810 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:01:00] 2026-01-27 03:27:24,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:01:00] 2026-01-27 03:27:24,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:01:00] 2026-01-27 03:27:24,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:01:00] 2026-01-27 03:27:24,875 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:01:00] 2026-01-27 03:27:24,876 | INFO     | sum of square deviations: 15328333903.694773
[2026-01-27 00:01:00] 2026-01-27 03:27:24,907 | INFO     | sum of deviations: 3127298024.727474
[2026-01-27 00:01:00] 2026-01-27 03:27:24,907 | INFO     | mean x: 1769473230.5122616
[2026-01-27 00:01:00] 2026-01-27 03:27:24,907 | INFO     | mean y: 2604320.1716621253
[2026-01-27 00:01:00] 2026-01-27 03:27:24,908 | INFO     | intersect: -358404917.58086956
[2026-01-27 00:01:00] 2026-01-27 03:27:24,936 | INFO     | chi2: 3.074500820375924
[2026-01-27 00:01:00] 2026-01-27 03:27:24,937 | INFO     | sum of square deviations: 14710528789.602169
[2026-01-27 00:01:00] 2026-01-27 03:27:24,992 | INFO     | sum of deviations: 27320924705.088398
[2026-01-27 00:01:00] 2026-01-27 03:27:24,992 | INFO     | mean x: 1769473078.0331492
[2026-01-27 00:01:00] 2026-01-27 03:27:24,992 | INFO     | mean y: 2610224.825966851
[2026-01-27 00:01:00] 2026-01-27 03:27:24,992 | INFO     | intersect: -3283719003.991108
[2026-01-27 00:01:00] 2026-01-27 03:27:24,993 | INFO     | chi2: 2.371157013379451
[2026-01-27 00:01:00] 2026-01-27 03:27:25,033 | INFO     | current chi2=2.371157013379451 (change=22.87668301582935 %)
[2026-01-27 00:01:00] 2026-01-27 03:27:25,034 | INFO     | right removable region: 361
[2026-01-27 00:01:00] 2026-01-27 03:27:25,034 | INFO     | sum of square deviations: 14710212628.66576
[2026-01-27 00:01:00] 2026-01-27 03:27:25,079 | INFO     | sum of deviations: -80075302549.61888
[2026-01-27 00:01:00] 2026-01-27 03:27:25,079 | INFO     | mean x: 1769473383.0303867
[2026-01-27 00:01:00] 2026-01-27 03:27:25,079 | INFO     | mean y: 2624775.4198895027
[2026-01-27 00:01:00] 2026-01-27 03:27:25,079 | INFO     | intersect: 9634784423.713667
[2026-01-27 00:01:00] 2026-01-27 03:27:25,080 | INFO     | chi2: 0.9792457199548359
[2026-01-27 00:01:00] 2026-01-27 03:27:25,080 | INFO     | current chi2=0.9792457199548359 (change=68.14944027775208 %)
[2026-01-27 00:01:00] 2026-01-27 03:27:25,081 | INFO     | sum of square deviations: 14108950718.487314
[2026-01-27 00:01:00] 2026-01-27 03:27:25,133 | INFO     | sum of deviations: -97213014800.9496
[2026-01-27 00:01:00] 2026-01-27 03:27:25,133 | INFO     | mean x: 1769473535.5462184
[2026-01-27 00:01:00] 2026-01-27 03:27:25,134 | INFO     | mean y: 2629104.4817927172
[2026-01-27 00:01:00] 2026-01-27 03:27:25,134 | INFO     | intersect: 12194595781.036018
[2026-01-27 00:01:00] 2026-01-27 03:27:25,204 | INFO     | chi2: 0.8635167495092897
[2026-01-27 00:01:00] 2026-01-27 03:27:25,204 | INFO     | current chi2=0.8635167495092897 (change=11.818174753001093 %)
[2026-01-27 00:01:00] 2026-01-27 03:27:25,204 | INFO     | left removable region: 20
[2026-01-27 00:01:00] 2026-01-27 03:27:25,205 | INFO     | sum of square deviations: 12295703483.343075
[2026-01-27 00:01:00] 2026-01-27 03:27:25,255 | INFO     | sum of deviations: -61126116474.44869
[2026-01-27 00:01:00] 2026-01-27 03:27:25,256 | INFO     | mean x: 1769473657.607038
[2026-01-27 00:01:00] 2026-01-27 03:27:25,256 | INFO     | mean y: 2632537.4369501467
[2026-01-27 00:01:00] 2026-01-27 03:27:25,256 | INFO     | intersect: 8799286835.410366
[2026-01-27 00:01:00] 2026-01-27 03:27:25,257 | INFO     | chi2: 0.13864686876684415
[2026-01-27 00:01:00] 2026-01-27 03:27:25,257 | INFO     | current memory leak: -4.97 B/s (using 341 data points, chi2=0.14)
[2026-01-27 00:01:00] 2026-01-27 03:27:25,258 | INFO     | could have reported an average CPU frequency of 2669 MHz (16 samples)
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | ..............................
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | . Timing measurements:
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | . get job = 0 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | . initial setup = 11 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | . payload setup = 26 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,259 | INFO     | . stage-in = 0 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,260 | INFO     | . payload execution = 22372 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,260 | INFO     | . stage-out = 9 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,260 | INFO     | . log creation = 3 s
[2026-01-27 00:01:00] 2026-01-27 03:27:25,260 | INFO     | ..............................
[2026-01-27 00:01:00] 2026-01-27 03:27:26,742 | INFO     | 
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | job summary report
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | --------------------------------------------------
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | PanDA job id: 6983773317
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | task id: 48317872
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | errors: (none)
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:01:00] 2026-01-27 03:27:26,744 | INFO     | pilot state: finished 
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | transexitcode: 0
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | exeerrorcode: 0
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | exeerrordiag: 
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | exitcode: 0
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | exitmsg: OK
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | cpuconsumptiontime: 55985 s
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | nevents: 400
[2026-01-27 00:01:00] 2026-01-27 03:27:26,745 | INFO     | neventsw: 0
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | pid: 703919
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | pgrp: 703919
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | corecount: 10
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | event service: False
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2283855, 3: 2284288, 4: 2284316, 22405: 2318890, 22406: 2319017, 22416: 2328071, 22417: 2328127, 22422: 2328321}
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | --------------------------------------------------
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | 
[2026-01-27 00:01:00] 2026-01-27 03:27:26,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-27 00:01:00] 2026-01-27 03:27:27,022 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,025 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:01:00] 2026-01-27 03:27:27,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:01:00] 2026-01-27 03:27:27,054 | INFO     | job 6983773317 has completed (purged errors)
[2026-01-27 00:01:00] 2026-01-27 03:27:27,054 | INFO     | overall cleanup function is called
[2026-01-27 00:01:00] 2026-01-27 03:27:28,258 | INFO     | --- collectZombieJob: --- 10, [703919]
[2026-01-27 00:01:00] 2026-01-27 03:27:28,259 | INFO     | zombie collector waiting for pid 703919
[2026-01-27 00:01:00] 2026-01-27 03:27:28,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:01:00] 2026-01-27 03:27:28,259 | INFO     | collected zombie processes
[2026-01-27 00:01:00] 2026-01-27 03:27:28,259 | INFO     | will attempt to kill all subprocesses of pid=703919
[2026-01-27 00:01:00] 2026-01-27 03:27:28,831 | INFO     | PID=697960 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:01:00] 2026-01-27 03:27:28,831 | INFO     | .. there are 16 such processes running
[2026-01-27 00:01:00] 2026-01-27 03:27:29,806 | INFO     | process IDs to be killed: [703919] (in reverse order)
[2026-01-27 00:01:00] 2026-01-27 03:27:30,252 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:01:00] 2026-01-27 03:27:30,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:01:00] 2026-01-27 03:27:30,337 | INFO     | did not find any defunct processes belonging to 703919
[2026-01-27 00:01:00] 2026-01-27 03:27:30,452 | INFO     | did not find any defunct processes belonging to 703919
[2026-01-27 00:01:00] 2026-01-27 03:27:30,453 | INFO     | ready for new job
[2026-01-27 00:01:00] 2026-01-27 03:27:30,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:01:00] 2026-01-27 03:27:30,457 | INFO     | **************************************
[2026-01-27 00:01:00] 2026-01-27 03:27:30,457 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:01:00] 2026-01-27 03:27:30,457 | INFO     | **************************************
[2026-01-27 00:01:00] 2026-01-27 03:27:30,457 | INFO     | 
[2026-01-27 00:01:00] 2026-01-27 03:27:30,518 | INFO     | architecture information:
[2026-01-27 00:01:00] 2026-01-27 03:27:30,575 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:01:00] 2026-01-27 03:27:30,899 | INFO     | cat /etc/os-release:
[2026-01-27 00:01:00] NAME="CentOS Linux"
[2026-01-27 00:01:00] VERSION="7 (Core)"
[2026-01-27 00:01:00] ID="centos"
[2026-01-27 00:01:00] ID_LIKE="rhel fedora"
[2026-01-27 00:01:00] VERSION_ID="7"
[2026-01-27 00:01:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:01:00] ANSI_COLOR="0;31"
[2026-01-27 00:01:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:01:00] HOME_URL="https://www.centos.org/"
[2026-01-27 00:01:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:01:00] 
[2026-01-27 00:01:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:01:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:01:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:01:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:01:00] 
[2026-01-27 00:01:00] 2026-01-27 03:27:30,899 | INFO     | **************************************
[2026-01-27 00:01:00] 2026-01-27 03:27:31,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-27 00:01:00] 2026-01-27 03:27:31,628 | INFO     | sufficient remaining disk space (61547216896 B)
[2026-01-27 00:01:00] 2026-01-27 03:27:31,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:01:00] 2026-01-27 03:27:31,655 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:01:00] 2026-01-27 03:27:31,655 | INFO     | update_server=False
[2026-01-27 00:01:00] 2026-01-27 03:27:31,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:01:00] 2026-01-27 03:27:31,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:01:00] 2026-01-27 03:27:31,656 | INFO     | aborting loop
[2026-01-27 00:01:00] 2026-01-27 03:27:31,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:01:00] 2026-01-27 03:27:31,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:01:00] 2026-01-27 03:27:32,192 | INFO     | all job control threads have been joined
[2026-01-27 00:01:00] 2026-01-27 03:27:32,427 | INFO     | all payload control threads have been joined
[2026-01-27 00:01:00] 2026-01-27 03:27:32,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:01:00] 2026-01-27 03:27:32,651 | INFO     | all data control threads have been joined
[2026-01-27 00:01:00] 2026-01-27 03:27:32,661 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:32,758 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:32,823 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:32,896 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:32,905 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,224 | INFO     | [job] control thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,431 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,442 | INFO     | [payload] control thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,657 | INFO     | [data] control thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,668 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,833 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,837 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,841 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,868 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:33,864 | INFO     | [job] validate thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:27:36,611 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:01:00] 2026-01-27 03:28:06,657 | INFO     | PID=697960 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 00:01:00] 2026-01-27 03:28:06,657 | INFO     | .. there are 16 such processes running
[2026-01-27 00:01:00] 2026-01-27 03:28:06,657 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:01:00] 2026-01-27 03:28:06,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:01:00] 2026-01-27 03:28:06,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:01:00] 2026-01-27 03:28:21,884 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:01:00] 2026-01-27 03:28:22,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183656208192)>', '<ExcThread(monitor, started 140183286568704)>']
[2026-01-27 00:01:00] 2026-01-27 03:28:22,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:01:00] 2026-01-27 03:28:22,917 | INFO     | [monitor] control thread has ended
[2026-01-27 00:01:00] 2026-01-27 03:28:27,377 | INFO     | all workflow threads have been joined
[2026-01-27 00:01:00] 2026-01-27 03:28:27,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:01:00] 2026-01-27 03:28:27,378 | INFO     | traces error code: 0
[2026-01-27 00:01:00] 2026-01-27 03:28:27,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:01:00] 2026-01-27 03:28:29,025 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:01:00] 2026-01-27 03:28:29,062 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:01:00] 2026-01-27 03:28:29,087 [wrapper] pilotpid: 697960
[2026-01-27 00:01:00] 2026-01-27 03:28:29,104 [wrapper] Pilot exit status: 0
[2026-01-27 00:01:00] 2026-01-27 03:28:29,210 [wrapper] pandaids: 6983773317
[2026-01-27 00:01:00] 2026-01-27 03:28:29,278 [wrapper] cleanup supervisor_pilot 1515994 697961
[2026-01-27 00:01:00] 2026-01-27 03:28:29,281 [wrapper] Test setup, not cleaning
[2026-01-27 00:01:00] 2026-01-27 03:28:29,312 [wrapper] apfmon messages muted
[2026-01-27 00:01:00] 2026-01-27 03:28:29,328 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:01:00] 2026-01-27 03:28:29,343 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:01:00]  *** Error codes and diagnostics ***
[2026-01-27 00:01:00]     "exeErrorCode": 0,
[2026-01-27 00:01:00]     "exeErrorDiag": "",
[2026-01-27 00:01:00]     "pilotErrorCode": 0,
[2026-01-27 00:01:00]     "pilotErrorDiag": "",
[2026-01-27 00:01:00]  *** Listing of results directory ***
[2026-01-27 00:01:00] total 683476
[2026-01-27 00:01:00] -rwx------. 1 boincer umatlas     36322 Jan 25 22:20 runpilot2-wrapper.sh
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 22:24 queuedata.json
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 22:24 pilot3.tar.gz
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas       100 Jan 26 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:01:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 16:12 run_atlas
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas       105 Jan 26 16:12 job.xml
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas 503247730 Jan 26 16:12 EVNT.48317869._000042.pool.root.1
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:12 start_atlas.sh
[2026-01-27 00:01:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 16:12 shared
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas    597755 Jan 26 16:12 input.tar.gz
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas         0 Jan 26 16:12 boinc_lockfile
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas      2514 Jan 26 16:12 pandaJob.out
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas        57 Jan 26 16:12 setup.sh.local
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas   1006457 Jan 26 16:13 agis_schedconf.cvmfs.json
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas       442 Jan 26 16:13 workernode_map.json
[2026-01-27 00:01:00] drwx------. 5 boincer umatlas      4096 Jan 26 16:13 pilot3
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas 186205728 Jan 26 22:26 HITS.48317872._002094.pool.root.1
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas       531 Jan 26 22:26 boinc_task_state.xml
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas      1041 Jan 26 22:27 memory_monitor_summary.json
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas   1516246 Jan 26 22:27 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas    599650 Jan 26 22:27 log.48317872._002094.job.log.tgz.1
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas        95 Jan 26 22:27 pilot_heartbeat.json
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas      6394 Jan 26 22:27 heartbeat.json
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas      4819 Jan 26 22:28 pilotlog.txt
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas   2639926 Jan 26 22:28 log.48317872._002094.job.log.1
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas       357 Jan 26 22:28 output.list
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas       620 Jan 26 22:28 runtime_log
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas   3256320 Jan 26 22:28 result.tar.gz
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas      9344 Jan 26 22:28 runtime_log.err
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas       657 Jan 26 22:28 lInMDmqKS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvT2KDmzEbpgm.diag
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas      6614 Jan 27 00:00 init_data.xml
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 00:01 boinc_mmap_file
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas        28 Jan 27 00:01 wrapper_checkpoint.txt
[2026-01-27 00:01:00] -rw-r--r--. 1 boincer umatlas     21420 Jan 27 00:01 stderr.txt
[2026-01-27 00:01:00] HITS file was successfully produced:
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas 186205728 Jan 26 22:26 shared/HITS.pool.root.1
[2026-01-27 00:01:00]  *** Contents of shared directory: ***
[2026-01-27 00:01:00] total 677088
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas 503247730 Jan 26 16:12 ATLAS.root_0
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:12 start_atlas.sh
[2026-01-27 00:01:00] -rw-r--r--. 2 boincer umatlas    597755 Jan 26 16:12 input.tar.gz
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas 186205728 Jan 26 22:26 HITS.pool.root.1
[2026-01-27 00:01:00] -rw-------. 1 boincer umatlas   3256320 Jan 26 22:28 result.tar.gz
00:01:02 (691783): run_atlas exited; CPU time 56700.917189
00:01:02 (691783): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN