Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
02:21:46 (1156664): wrapper (7.7.26015): starting
02:21:46 (1156664): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 02:21:46] Arguments: --nthreads 4
[2026-01-27 02:21:46] Threads: 4
[2026-01-27 02:21:46] Checking for CVMFS
[2026-01-27 02:21:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 02:21:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 02:21:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 02:21:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 02:21:48] 2.13.1.0 784092 736 73188 155568 2 49 7053955 10240001 1822 130560 0 798905 99.991 33076 392 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-27 02:21:48] CVMFS is ok
[2026-01-27 02:21:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 02:21:48] Checking for apptainer binary...
[2026-01-27 02:21:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 02:21:48] Running /usr/bin/apptainer --version
[2026-01-27 02:21:48] apptainer version 1.4.5
[2026-01-27 02:21:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 02:21:48] peachesvl
[2026-01-27 02:21:48] apptainer works
[2026-01-27 02:21:48] Set ATHENA_PROC_NUMBER=4
[2026-01-27 02:21:48] Set ATHENA_CORE_NUMBER=4
[2026-01-27 02:21:48] Starting ATLAS job with PandaID=6983449007
[2026-01-27 02:21:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:17:45]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:17:45] 2026-01-27 03:16:35,827 | INFO     | maximum number of monitored processes: 6
[2026-01-27 04:17:45] 2026-01-27 03:16:36,420 | INFO     | job 6983449007 has state=finished
[2026-01-27 04:17:45] 2026-01-27 03:16:36,420 | INFO     | preparing for final server update for job 6983449007 in state='finished'
[2026-01-27 04:17:45] 2026-01-27 03:16:36,421 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983449007/jobReport.json
[2026-01-27 04:17:45] 2026-01-27 03:16:36,424 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-01-27 04:17:45] 2026-01-27 03:16:36,425 | INFO     | this job has now completed (state=finished)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,425 | INFO     | log transfer has been attempted: DONE
[2026-01-27 04:17:45] 2026-01-27 03:16:36,425 | INFO     | job 6983449007 has finished - writing final server update
[2026-01-27 04:17:45] 2026-01-27 03:16:36,425 | INFO     | total number of processed events: 400 (read)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,429 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983449007/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,430 | INFO     | extracted standard info from prmon json
[2026-01-27 04:17:45] 2026-01-27 03:16:36,430 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 04:17:45] 2026-01-27 03:16:36,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 04:17:45] 2026-01-27 03:16:36,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 04:17:45] 2026-01-27 03:16:36,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 04:17:45] 2026-01-27 03:16:36,433 | INFO     | fitting pss+swap vs Time
[2026-01-27 04:17:45] 2026-01-27 03:16:36,434 | INFO     | sum of square deviations: 435610028.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,435 | INFO     | sum of deviations: -13245494250.000006
[2026-01-27 04:17:45] 2026-01-27 03:16:36,435 | INFO     | mean x: 1769480372.5
[2026-01-27 04:17:45] 2026-01-27 03:16:36,435 | INFO     | mean y: 2442929.8928571427
[2026-01-27 04:17:45] 2026-01-27 03:16:36,435 | INFO     | intersect: 53806626931.45266
[2026-01-27 04:17:45] 2026-01-27 03:16:36,435 | INFO     | chi2: 2.206376012741839
[2026-01-27 04:17:45] 2026-01-27 03:16:36,436 | INFO     | sum of square deviations: 379832238.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,436 | INFO     | sum of deviations: -11352286964.999994
[2026-01-27 04:17:45] 2026-01-27 03:16:36,436 | INFO     | mean x: 1769480220.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | mean y: 2448109.4672897197
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | intersect: 52888025547.818695
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | chi2: 2.207951312153717
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | current chi2=2.207951312153717 (change=-0.07139759509625364 %)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | right removable region: 106
[2026-01-27 04:17:45] 2026-01-27 03:16:36,437 | INFO     | sum of square deviations: 379832238.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,438 | INFO     | sum of deviations: -34025527573.999996
[2026-01-27 04:17:45] 2026-01-27 03:16:36,438 | INFO     | mean x: 1769480525.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,438 | INFO     | mean y: 2498932.271028037
[2026-01-27 04:17:45] 2026-01-27 03:16:36,438 | INFO     | intersect: 158513289675.2187
[2026-01-27 04:17:45] 2026-01-27 03:16:36,439 | INFO     | chi2: 0.17562711485574306
[2026-01-27 04:17:45] 2026-01-27 03:16:36,439 | INFO     | current chi2=0.17562711485574306 (change=92.04001884350195 %)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,439 | INFO     | sum of square deviations: 329031285.5
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | sum of deviations: -31082872080.0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | mean x: 1769480677.5
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | mean y: 2490028.4509803923
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | intersect: 167161492745.12195
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | chi2: 0.16622040017380596
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | current chi2=0.16622040017380596 (change=5.356071976507504 %)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,440 | INFO     | left removable region: 20
[2026-01-27 04:17:45] 2026-01-27 03:16:36,441 | INFO     | sum of square deviations: 197203697.5
[2026-01-27 04:17:45] 2026-01-27 03:16:36,441 | INFO     | sum of deviations: -21232880914.999996
[2026-01-27 04:17:45] 2026-01-27 03:16:36,441 | INFO     | mean x: 1769480799.5
[2026-01-27 04:17:45] 2026-01-27 03:16:36,441 | INFO     | mean y: 2472456.0465116277
[2026-01-27 04:17:45] 2026-01-27 03:16:36,442 | INFO     | intersect: 190522100502.89127
[2026-01-27 04:17:45] 2026-01-27 03:16:36,442 | INFO     | chi2: 0.14614329722924638
[2026-01-27 04:17:45] 2026-01-27 03:16:36,442 | INFO     | current memory leak: -107.67 B/s (using 86 data points, chi2=0.15)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,442 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | ..............................
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | . Timing measurements:
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | . get job = 0 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | . initial setup = 15 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | . payload setup = 16 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,443 | INFO     | . stage-in = 0 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,444 | INFO     | . payload execution = 6812 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,444 | INFO     | . stage-out = 0 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,444 | INFO     | . log creation = 0 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,444 | INFO     | ..............................
[2026-01-27 04:17:45] 2026-01-27 03:16:36,528 | INFO     | 
[2026-01-27 04:17:45] 2026-01-27 03:16:36,528 | INFO     | job summary report
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | --------------------------------------------------
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | PanDA job id: 6983449007
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | task id: 48298567
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | errors: (none)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | pilot state: finished 
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | transexitcode: 0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | exeerrorcode: 0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | exeerrordiag: 
[2026-01-27 04:17:45] 2026-01-27 03:16:36,529 | INFO     | exitcode: 0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | exitmsg: OK
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | cpuconsumptiontime: 25948 s
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | nevents: 400
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | neventsw: 0
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | pid: 1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | pgrp: 1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | corecount: 4
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | event service: False
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | sizes: {0: 2283944, 1: 2284405, 11: 2284405, 6833: 2311659, 6834: 2320685, 6835: 2320741, 6836: 2321063}
[2026-01-27 04:17:45] 2026-01-27 03:16:36,530 | INFO     | --------------------------------------------------
[2026-01-27 04:17:45] 2026-01-27 03:16:36,531 | INFO     | 
[2026-01-27 04:17:45] 2026-01-27 03:16:36,531 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-27 04:17:45] 2026-01-27 03:16:36,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,606 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,606 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 04:17:45] 2026-01-27 03:16:36,607 | INFO     | job 6983449007 has completed (purged errors)
[2026-01-27 04:17:45] 2026-01-27 03:16:36,607 | INFO     | overall cleanup function is called
[2026-01-27 04:17:45] 2026-01-27 03:16:37,617 | INFO     | --- collectZombieJob: --- 10, [1165200]
[2026-01-27 04:17:45] 2026-01-27 03:16:37,617 | INFO     | zombie collector waiting for pid 1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:37,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 04:17:45] 2026-01-27 03:16:37,617 | INFO     | collected zombie processes
[2026-01-27 04:17:45] 2026-01-27 03:16:37,617 | INFO     | will attempt to kill all subprocesses of pid=1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:38,012 | INFO     | process IDs to be killed: [1165200] (in reverse order)
[2026-01-27 04:17:45] 2026-01-27 03:16:38,171 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 04:17:45] 2026-01-27 03:16:38,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 04:17:45] 2026-01-27 03:16:38,181 | INFO     | did not find any defunct processes belonging to 1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:38,192 | INFO     | did not find any defunct processes belonging to 1165200
[2026-01-27 04:17:45] 2026-01-27 03:16:38,193 | INFO     | ready for new job
[2026-01-27 04:17:45] 2026-01-27 03:16:38,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 04:17:45] 2026-01-27 03:16:38,198 | INFO     | **************************************
[2026-01-27 04:17:45] 2026-01-27 03:16:38,198 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 04:17:45] 2026-01-27 03:16:38,198 | INFO     | **************************************
[2026-01-27 04:17:45] 2026-01-27 03:16:38,199 | INFO     | 
[2026-01-27 04:17:45] 2026-01-27 03:16:38,200 | INFO     | pilot is running in a VM
[2026-01-27 04:17:45] 2026-01-27 03:16:38,200 | INFO     | architecture information:
[2026-01-27 04:17:45] 2026-01-27 03:16:38,202 | INFO     | executing command: cat /etc/os-release
[2026-01-27 04:17:45] 2026-01-27 03:16:38,237 | INFO     | cat /etc/os-release:
[2026-01-27 04:17:45] NAME="CentOS Linux"
[2026-01-27 04:17:45] VERSION="7 (Core)"
[2026-01-27 04:17:45] ID="centos"
[2026-01-27 04:17:45] ID_LIKE="rhel fedora"
[2026-01-27 04:17:45] VERSION_ID="7"
[2026-01-27 04:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 04:17:45] ANSI_COLOR="0;31"
[2026-01-27 04:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 04:17:45] HOME_URL="https://www.centos.org/"
[2026-01-27 04:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 04:17:45] 
[2026-01-27 04:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 04:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 04:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 04:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 04:17:45] 
[2026-01-27 04:17:45] 2026-01-27 03:16:38,238 | INFO     | **************************************
[2026-01-27 04:17:45] 2026-01-27 03:16:38,742 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-27 04:17:45] 2026-01-27 03:16:38,775 | INFO     | sufficient remaining disk space (58213793792 B)
[2026-01-27 04:17:45] 2026-01-27 03:16:38,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 04:17:45] 2026-01-27 03:16:38,776 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 04:17:45] 2026-01-27 03:16:38,776 | INFO     | update_server=False
[2026-01-27 04:17:45] 2026-01-27 03:16:38,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 04:17:45] 2026-01-27 03:16:38,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:17:45] 2026-01-27 03:16:38,802 | INFO     | all data control threads have been joined
[2026-01-27 04:17:45] 2026-01-27 03:16:39,179 | INFO     | all payload control threads have been joined
[2026-01-27 04:17:45] 2026-01-27 03:16:39,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:17:45] 2026-01-27 03:16:39,337 | INFO     | aborting loop
[2026-01-27 04:17:45] 2026-01-27 03:16:39,778 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:39,808 | INFO     | [data] control thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:39,924 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,185 | INFO     | [payload] control thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,246 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,343 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,440 | INFO     | all job control threads have been joined
[2026-01-27 04:17:45] 2026-01-27 03:16:40,733 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,784 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:40,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:17:45] 2026-01-27 03:16:41,246 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,259 | INFO     | [job] validate thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,263 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,266 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,446 | INFO     | [job] control thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:41,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:17:45] 2026-01-27 03:16:42,547 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:16:45,242 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:17:45] 2026-01-27 03:17:08,033 | INFO     | PID=1160669 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 04:17:45] 2026-01-27 03:17:08,033 | INFO     | .. there are 3 such processes running
[2026-01-27 04:17:45] 2026-01-27 03:17:08,034 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:17:45] 2026-01-27 03:17:08,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:17:45] 2026-01-27 03:17:08,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:17:45] 2026-01-27 03:17:37,630 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:17:45] 2026-01-27 03:17:39,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126775034857280)>', '<ExcThread(monitor, started 126773811476224)>']
[2026-01-27 04:17:45] 2026-01-27 03:17:40,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:17:45] 2026-01-27 03:17:40,204 | INFO     | [monitor] control thread has ended
[2026-01-27 04:17:45] 2026-01-27 03:17:44,511 | INFO     | all workflow threads have been joined
[2026-01-27 04:17:45] 2026-01-27 03:17:44,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:17:45] 2026-01-27 03:17:44,512 | INFO     | traces error code: 0
[2026-01-27 04:17:45] 2026-01-27 03:17:44,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:17:45] 2026-01-27 03:17:44,712 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:17:45] 2026-01-27 03:17:44,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:17:45] 2026-01-27 03:17:44,733 [wrapper] pilotpid: 1160669
[2026-01-27 04:17:45] 2026-01-27 03:17:44,743 [wrapper] Pilot exit status: 0
[2026-01-27 04:17:45] 2026-01-27 03:17:44,778 [wrapper] pandaids: 6983449007
[2026-01-27 04:17:45] 2026-01-27 03:17:44,913 [wrapper] cleanup supervisor_pilot 1214587 1160670
[2026-01-27 04:17:45] 2026-01-27 03:17:44,923 [wrapper] Test setup, not cleaning
[2026-01-27 04:17:45] 2026-01-27 03:17:44,932 [wrapper] apfmon messages muted
[2026-01-27 04:17:45] 2026-01-27 03:17:44,942 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:17:45] 2026-01-27 03:17:44,953 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:17:45]  *** Error codes and diagnostics ***
[2026-01-27 04:17:45]     "exeErrorCode": 0,
[2026-01-27 04:17:45]     "exeErrorDiag": "",
[2026-01-27 04:17:45]     "pilotErrorCode": 0,
[2026-01-27 04:17:45]     "pilotErrorDiag": "",
[2026-01-27 04:17:45]  *** Listing of results directory ***
[2026-01-27 04:17:45] insgesamt 413608
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc      5111 Jan 25 21:48 queuedata.json
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-27 04:17:45] -rwx------ 1 yeti boinc     36322 Jan 25 21:48 runpilot2-wrapper.sh
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc       100 Jan 27 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:17:45] -rwxr-xr-x 1 yeti boinc      7986 Jan 27 02:21 run_atlas
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc       105 Jan 27 02:21 job.xml
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc 247435068 Jan 27 02:21 EVNT.48298565._000005.pool.root.1
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc     15845 Jan 27 02:21 start_atlas.sh
[2026-01-27 04:17:45] drwxrwx--x 2 yeti boinc      4096 Jan 27 02:21 shared
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc    597764 Jan 27 02:21 input.tar.gz
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc      6558 Jan 27 02:21 init_data.xml
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc         0 Jan 27 02:21 boinc_setup_complete
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc         0 Jan 27 02:21 boinc_lockfile
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc      2613 Jan 27 02:21 pandaJob.out
[2026-01-27 04:17:45] -rw------- 1 yeti boinc        52 Jan 27 02:21 setup.sh.local
[2026-01-27 04:17:45] -rw------- 1 yeti boinc   1006441 Jan 27 02:22 agis_schedconf.cvmfs.json
[2026-01-27 04:17:45] -rw------- 1 yeti boinc   1516246 Jan 27 02:22 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:17:45] -rw------- 1 yeti boinc       422 Jan 27 02:22 workernode_map.json
[2026-01-27 04:17:45] drwx------ 5 yeti boinc      4096 Jan 27 02:22 pilot3
[2026-01-27 04:17:45] -rw------- 1 yeti boinc 169565517 Jan 27 04:16 HITS.48298567._000119.pool.root.1
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc       529 Jan 27 04:16 boinc_task_state.xml
[2026-01-27 04:17:45] -rw------- 1 yeti boinc        95 Jan 27 04:16 pilot_heartbeat.json
[2026-01-27 04:17:45] -rw------- 1 yeti boinc      1015 Jan 27 04:16 memory_monitor_summary.json
[2026-01-27 04:17:45] -rw------- 1 yeti boinc    303382 Jan 27 04:16 log.48298567._000119.job.log.tgz.1
[2026-01-27 04:17:45] -rw------- 1 yeti boinc      6285 Jan 27 04:16 heartbeat.json
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc      8192 Jan 27 04:17 boinc_mmap_file
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc        27 Jan 27 04:17 wrapper_checkpoint.txt
[2026-01-27 04:17:45] -rw------- 1 yeti boinc      4895 Jan 27 04:17 pilotlog.txt
[2026-01-27 04:17:45] -rw------- 1 yeti boinc    994598 Jan 27 04:17 log.48298567._000119.job.log.1
[2026-01-27 04:17:45] -rw------- 1 yeti boinc       357 Jan 27 04:17 output.list
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc       620 Jan 27 04:17 runtime_log
[2026-01-27 04:17:45] -rw------- 1 yeti boinc   1310720 Jan 27 04:17 result.tar.gz
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc      9546 Jan 27 04:17 runtime_log.err
[2026-01-27 04:17:45] -rw------- 1 yeti boinc       639 Jan 27 04:17 0ORMDmKDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKH8KDm0n2VYo.diag
[2026-01-27 04:17:45] -rw-r--r-- 1 yeti boinc     20969 Jan 27 04:17 stderr.txt
[2026-01-27 04:17:45] HITS file was successfully produced:
[2026-01-27 04:17:45] -rw------- 1 yeti boinc 169565517 Jan 27 04:16 shared/HITS.pool.root.1
[2026-01-27 04:17:45]  *** Contents of shared directory: ***
[2026-01-27 04:17:45] insgesamt 409116
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc 247435068 Jan 27 02:21 ATLAS.root_0
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc     15845 Jan 27 02:21 start_atlas.sh
[2026-01-27 04:17:45] -rw-r--r-- 2 yeti boinc    597764 Jan 27 02:21 input.tar.gz
[2026-01-27 04:17:45] -rw------- 1 yeti boinc 169565517 Jan 27 04:16 HITS.pool.root.1
[2026-01-27 04:17:45] -rw------- 1 yeti boinc   1310720 Jan 27 04:17 result.tar.gz
04:17:47 (1156664): run_atlas exited; CPU time 26262.194268
04:17:47 (1156664): called boinc_finish(0)

</stderr_txt>
]]>

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