Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:12 (3842026): wrapper (7.7.26015): starting
00:08:12 (3842026): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 00:08:12] Arguments: --nthreads 4
[2026-01-28 00:08:12] Threads: 4
[2026-01-28 00:08:12] Checking for CVMFS
[2026-01-28 00:08:12] No cvmfs_config command found, will try listing directly
[2026-01-28 00:08:12] CVMFS is ok
[2026-01-28 00:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 00:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 00:08:12] Further information can be found at the LHC@home message board.
[2026-01-28 00:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 00:08:12] Checking for apptainer binary...
[2026-01-28 00:08:12] which: no apptainer in ((null))
[2026-01-28 00:08:12] apptainer is not installed, using version from CVMFS
[2026-01-28 00:08:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 00:08:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-28 00:08:13] apptainer works
[2026-01-28 00:08:13] Set ATHENA_PROC_NUMBER=4
[2026-01-28 00:08:13] Set ATHENA_CORE_NUMBER=4
[2026-01-28 00:08:13] Starting ATLAS job with PandaID=6979650194
[2026-01-28 00:08:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 02:39:52]  *** The last 200 lines of the pilot log: ***
[2026-01-28 02:39:52] 2026-01-28 01:26:43,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 02:39:52] 2026-01-28 01:26:43,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 02:39:52] 2026-01-28 01:26:43,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 02:39:52] 2026-01-28 01:26:43,936 | INFO     | fitting pss+swap vs Time
[2026-01-28 02:39:52] 2026-01-28 01:26:43,937 | INFO     | sum of square deviations: 779958810.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,937 | INFO     | sum of deviations: 3133141292.000002
[2026-01-28 02:39:52] 2026-01-28 01:26:43,937 | INFO     | mean x: 1769559460.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,938 | INFO     | mean y: 2311563.8088235296
[2026-01-28 02:39:52] 2026-01-28 01:26:43,938 | INFO     | intersect: -7106114859.81449
[2026-01-28 02:39:52] 2026-01-28 01:26:43,938 | INFO     | chi2: 1.955361317164451
[2026-01-28 02:39:52] 2026-01-28 01:26:43,938 | INFO     | sum of square deviations: 697054930.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | sum of deviations: 11045157150.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | mean x: 1769559308.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | mean y: 2325668.5572519084
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | intersect: -28037158455.176373
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | chi2: 1.2186032521920813
[2026-01-28 02:39:52] 2026-01-28 01:26:43,939 | INFO     | current chi2=1.2186032521920813 (change=37.678870830930244 %)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,940 | INFO     | sum of square deviations: 620244187.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,940 | INFO     | sum of deviations: 10597087506.000004
[2026-01-28 02:39:52] 2026-01-28 01:26:43,940 | INFO     | mean x: 1769559155.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,940 | INFO     | mean y: 2324778.396825397
[2026-01-28 02:39:52] 2026-01-28 01:26:43,941 | INFO     | intersect: -30231208394.176388
[2026-01-28 02:39:52] 2026-01-28 01:26:43,941 | INFO     | chi2: 1.22025624436147
[2026-01-28 02:39:52] 2026-01-28 01:26:43,941 | INFO     | current chi2=1.22025624436147 (change=-0.13564645970008313 %)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,941 | INFO     | right removable region: 125
[2026-01-28 02:39:52] 2026-01-28 01:26:43,941 | INFO     | sum of square deviations: 697054930.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | sum of deviations: -8395334474.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | mean x: 1769559613.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | mean y: 2332086.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | intersect: 21314920496.811466
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | chi2: 0.7921079023405105
[2026-01-28 02:39:52] 2026-01-28 01:26:43,942 | INFO     | current chi2=0.7921079023405105 (change=59.49045859773997 %)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,943 | INFO     | sum of square deviations: 620244187.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,943 | INFO     | sum of deviations: -6487909766.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,943 | INFO     | mean x: 1769559765.5
[2026-01-28 02:39:52] 2026-01-28 01:26:43,943 | INFO     | mean y: 2328388.6746031744
[2026-01-28 02:39:52] 2026-01-28 01:26:43,943 | INFO     | intersect: 18512367364.240013
[2026-01-28 02:39:52] 2026-01-28 01:26:43,944 | INFO     | chi2: 0.7653819223432631
[2026-01-28 02:39:52] 2026-01-28 01:26:43,944 | INFO     | current chi2=0.7653819223432631 (change=3.3740327445639506 %)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,944 | INFO     | left removable region: 20
[2026-01-28 02:39:52] 2026-01-28 01:26:43,944 | INFO     | sum of square deviations: 358927660.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,944 | INFO     | sum of deviations: 619238572.0000001
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | mean x: 1769559735.0
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | mean y: 2345403.1523809526
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | intersect: -3050580758.542983
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | chi2: 0.0002528616824972012
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | current memory leak: 1.73 B/s (using 105 data points, chi2=0.00)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,945 | INFO     | could have reported an average CPU frequency of 2706 MHz (8 samples)
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | ..............................
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . Timing measurements:
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . get job = 0 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . initial setup = 8 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . payload setup = 9 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . stage-in = 0 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . payload execution = 8258 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . stage-out = 0 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | . log creation = 0 s
[2026-01-28 02:39:52] 2026-01-28 01:26:43,946 | INFO     | ..............................
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | 
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | job summary report
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | --------------------------------------------------
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | PanDA job id: 6979650194
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | task id: 48312938
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | errors: (none)
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 02:39:52] 2026-01-28 01:26:44,032 | INFO     | pilot state: finished 
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | transexitcode: 0
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | exeerrorcode: 0
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | exeerrordiag: 
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | exitcode: 0
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | exitmsg: OK
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | cpuconsumptiontime: 31339 s
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | nevents: 400
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | neventsw: 0
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | pid: 3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | pgrp: 3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | corecount: 4
[2026-01-28 02:39:52] 2026-01-28 01:26:44,033 | INFO     | event service: False
[2026-01-28 02:39:52] 2026-01-28 01:26:44,034 | INFO     | sizes: {0: 2284085, 1: 2284347, 11: 2284375, 8271: 2312663, 8273: 2321685, 8275: 2321741, 8277: 2322063}
[2026-01-28 02:39:52] 2026-01-28 01:26:44,034 | INFO     | --------------------------------------------------
[2026-01-28 02:39:52] 2026-01-28 01:26:44,034 | INFO     | 
[2026-01-28 02:39:52] 2026-01-28 01:26:44,034 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-28 02:39:52] 2026-01-28 01:26:44,063 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 02:39:52] 2026-01-28 01:26:44,065 | INFO     | job 6979650194 has completed (purged errors)
[2026-01-28 02:39:52] 2026-01-28 01:26:44,066 | INFO     | overall cleanup function is called
[2026-01-28 02:39:52] 2026-01-28 01:26:45,073 | INFO     | --- collectZombieJob: --- 10, [3851920]
[2026-01-28 02:39:52] 2026-01-28 01:26:45,073 | INFO     | zombie collector waiting for pid 3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:45,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 02:39:52] 2026-01-28 01:26:45,074 | INFO     | collected zombie processes
[2026-01-28 02:39:52] 2026-01-28 01:26:45,074 | INFO     | will attempt to kill all subprocesses of pid=3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:47,929 | WARNING  | process 3851920 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 02:39:52] 2026-01-28 01:26:48,630 | INFO     | PID=3846409 has CPU usage=30.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 02:39:52] 2026-01-28 01:26:48,631 | INFO     | .. there are 8 such processes running
[2026-01-28 02:39:52] 2026-01-28 01:26:48,725 | INFO     | process IDs to be killed: [3851920] (in reverse order)
[2026-01-28 02:39:52] 2026-01-28 01:26:48,988 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 02:39:52] 2026-01-28 01:26:48,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 02:39:52] 2026-01-28 01:26:49,046 | INFO     | did not find any defunct processes belonging to 3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:49,148 | INFO     | did not find any defunct processes belonging to 3851920
[2026-01-28 02:39:52] 2026-01-28 01:26:49,149 | INFO     | ready for new job
[2026-01-28 02:39:52] 2026-01-28 01:26:49,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 02:39:52] 2026-01-28 01:26:49,151 | INFO     | **************************************
[2026-01-28 02:39:52] 2026-01-28 01:26:49,154 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 02:39:52] 2026-01-28 01:26:49,154 | INFO     | **************************************
[2026-01-28 02:39:52] 2026-01-28 01:26:49,154 | INFO     | 
[2026-01-28 02:39:52] 2026-01-28 01:26:49,167 | INFO     | architecture information:
[2026-01-28 02:39:52] 2026-01-28 01:26:49,167 | INFO     | executing command: cat /etc/os-release
[2026-01-28 02:39:52] 2026-01-28 01:26:49,189 | INFO     | cat /etc/os-release:
[2026-01-28 02:39:52] NAME="CentOS Linux"
[2026-01-28 02:39:52] VERSION="7 (Core)"
[2026-01-28 02:39:52] ID="centos"
[2026-01-28 02:39:52] ID_LIKE="rhel fedora"
[2026-01-28 02:39:52] VERSION_ID="7"
[2026-01-28 02:39:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 02:39:52] ANSI_COLOR="0;31"
[2026-01-28 02:39:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 02:39:52] HOME_URL="https://www.centos.org/"
[2026-01-28 02:39:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 02:39:52] 
[2026-01-28 02:39:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 02:39:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 02:39:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 02:39:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 02:39:52] 
[2026-01-28 02:39:52] 2026-01-28 01:26:49,190 | INFO     | **************************************
[2026-01-28 02:39:52] 2026-01-28 01:26:49,286 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 02:39:52] 2026-01-28 01:26:49,692 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-28 02:39:52] 2026-01-28 01:26:49,715 | INFO     | sufficient remaining disk space (3289452118016 B)
[2026-01-28 02:39:52] 2026-01-28 01:26:49,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 02:39:52] 2026-01-28 01:26:49,716 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 02:39:52] 2026-01-28 01:26:49,716 | INFO     | update_server=False
[2026-01-28 02:39:52] 2026-01-28 01:26:49,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 02:39:52] 2026-01-28 01:26:49,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:39:52] 2026-01-28 01:26:49,883 | INFO     | all data control threads have been joined
[2026-01-28 02:39:52] 2026-01-28 01:26:49,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 02:39:52] 2026-01-28 01:26:49,969 | INFO     | number of running child processes to parent process 3851920: 1
[2026-01-28 02:39:52] 2026-01-28 01:26:49,969 | INFO     | maximum number of monitored processes: 6
[2026-01-28 02:39:52] 2026-01-28 01:26:49,969 | INFO     | aborting job monitoring since job object (job id=6979650194) has expired
[2026-01-28 02:39:52] 2026-01-28 01:26:49,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:39:52] 2026-01-28 01:26:49,969 | INFO     | will abort loop
[2026-01-28 02:39:52] 2026-01-28 01:26:50,186 | INFO     | all job control threads have been joined
[2026-01-28 02:39:52] 2026-01-28 01:26:50,722 | INFO     | [job] retrieve thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:50,722 | INFO     | [job] queue monitor thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:50,889 | INFO     | [data] control thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:50,922 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:50,974 | INFO     | [job] job monitor thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,027 | INFO     | all payload control threads have been joined
[2026-01-28 02:39:52] 2026-01-28 01:26:51,067 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,090 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,192 | INFO     | [job] control thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,296 | INFO     | [data] copytool_in thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,829 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,884 | INFO     | [job] validate thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,947 | INFO     | [data] copytool_out thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:51,981 | INFO     | [payload] validate_post thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:52,032 | INFO     | [payload] control thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:52,273 | INFO     | [payload] failed_post thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:26:52,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 02:39:52] 2026-01-28 01:26:56,338 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 02:39:52] 2026-01-28 01:27:21,637 | INFO     | PID=3846409 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 02:39:52] 2026-01-28 01:27:21,637 | INFO     | .. there are 7 such processes running
[2026-01-28 02:39:52] 2026-01-28 01:27:21,637 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 02:39:52] 2026-01-28 01:27:21,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 02:39:52] 2026-01-28 01:27:21,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 02:39:52] 2026-01-28 01:27:48,228 | INFO     | [monitor] cgroup control has ended
[2026-01-28 02:39:52] 2026-01-28 01:27:49,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22878646814528)>', '<ExcThread(monitor, started 22878342854400)>']
[2026-01-28 02:39:52] 2026-01-28 01:27:49,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 02:39:52] 2026-01-28 01:27:49,750 | INFO     | [monitor] control thread has ended
[2026-01-28 02:39:52] 2026-01-28 01:27:54,587 | INFO     | all workflow threads have been joined
[2026-01-28 02:39:52] 2026-01-28 01:27:54,587 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 02:39:52] 2026-01-28 01:27:54,587 | INFO     | traces error code: 0
[2026-01-28 02:39:52] 2026-01-28 01:27:54,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 02:39:52] 2026-01-28 01:27:54,724 [wrapper] ==== pilot stdout END ====
[2026-01-28 02:39:52] 2026-01-28 01:27:54,730 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 02:39:52] 2026-01-28 01:27:54,735 [wrapper] pilotpid: 3846409
[2026-01-28 02:39:52] 2026-01-28 01:27:54,739 [wrapper] Pilot exit status: 0
[2026-01-28 02:39:52] 2026-01-28 01:27:54,753 [wrapper] pandaids: 6979650194
[2026-01-28 02:39:52] 2026-01-28 01:27:54,935 [wrapper] cleanup supervisor_pilot 3986247 3846410
[2026-01-28 02:39:52] 2026-01-28 01:27:54,939 [wrapper] Test setup, not cleaning
[2026-01-28 02:39:52] 2026-01-28 01:27:54,943 [wrapper] apfmon messages muted
[2026-01-28 02:39:52] 2026-01-28 01:27:54,947 [wrapper] ==== wrapper stdout END ====
[2026-01-28 02:39:52] 2026-01-28 01:27:54,950 [wrapper] ==== wrapper stderr END ====
[2026-01-28 02:39:52]  *** Error codes and diagnostics ***
[2026-01-28 02:39:52]     "exeErrorCode": 0,
[2026-01-28 02:39:52]     "exeErrorDiag": "",
[2026-01-28 02:39:52]     "pilotErrorCode": 0,
[2026-01-28 02:39:52]     "pilotErrorDiag": "",
[2026-01-28 02:39:52]  *** Listing of results directory ***
[2026-01-28 02:39:52] total 462828
[2026-01-28 02:39:52] -rwx------ 1 boinc boinc     36322 Jan 22 11:24 runpilot2-wrapper.sh
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc    584422 Jan 22 11:24 pilot3.tar.gz
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc      5111 Jan 22 11:24 queuedata.json
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc       100 Jan 28 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 02:39:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 00:08 run_atlas
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc       105 Jan 28 00:08 job.xml
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc      6692 Jan 28 00:08 init_data.xml
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc 280245899 Jan 28 00:08 EVNT.48312936._000015.pool.root.1
[2026-01-28 02:39:52] drwxrwx--x 2 boinc boinc      4096 Jan 28 00:08 shared
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc    597782 Jan 28 00:08 input.tar.gz
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc     15845 Jan 28 00:08 start_atlas.sh
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc         0 Jan 28 00:08 boinc_lockfile
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc      2632 Jan 28 00:08 pandaJob.out
[2026-01-28 02:39:52] -rw------- 1 boinc boinc   1005237 Jan 28 00:08 agis_schedconf.cvmfs.json
[2026-01-28 02:39:52] -rw------- 1 boinc boinc   1516246 Jan 28 00:08 agis_ddmendpoints.agis.ALL.json
[2026-01-28 02:39:52] -rw------- 1 boinc boinc       443 Jan 28 00:08 workernode_map.json
[2026-01-28 02:39:52] drwx------ 5 boinc boinc      4096 Jan 28 00:08 pilot3
[2026-01-28 02:39:52] -rw------- 1 boinc boinc 186775734 Jan 28 02:26 HITS.48312938._000307.pool.root.1
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc       528 Jan 28 02:26 boinc_task_state.xml
[2026-01-28 02:39:52] -rw------- 1 boinc boinc        95 Jan 28 02:26 pilot_heartbeat.json
[2026-01-28 02:39:52] -rw------- 1 boinc boinc      1033 Jan 28 02:26 memory_monitor_summary.json
[2026-01-28 02:39:52] -rw------- 1 boinc boinc    310854 Jan 28 02:26 log.48312938._000307.job.log.tgz.1
[2026-01-28 02:39:52] -rw------- 1 boinc boinc      6347 Jan 28 02:26 heartbeat.json
[2026-01-28 02:39:52] -rw------- 1 boinc boinc      5251 Jan 28 02:27 pilotlog.txt
[2026-01-28 02:39:52] -rw------- 1 boinc boinc   1172332 Jan 28 02:27 log.48312938._000307.job.log.1
[2026-01-28 02:39:52] -rw------- 1 boinc boinc       357 Jan 28 02:27 output.list
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc       620 Jan 28 02:27 runtime_log
[2026-01-28 02:39:52] -rw------- 1 boinc boinc   1505280 Jan 28 02:27 result.tar.gz
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc      9221 Jan 28 02:27 runtime_log.err
[2026-01-28 02:39:52] -rw------- 1 boinc boinc       664 Jan 28 02:27 FLJMDmN2628n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQatKDmAwXBXn.diag
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc      8192 Jan 28 02:39 boinc_mmap_file
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc        26 Jan 28 02:39 wrapper_checkpoint.txt
[2026-01-28 02:39:52] -rw-r--r-- 1 boinc boinc     20964 Jan 28 02:39 stderr.txt
[2026-01-28 02:39:52] HITS file was successfully produced:
[2026-01-28 02:39:52] -rw------- 1 boinc boinc 186775734 Jan 28 02:26 shared/HITS.pool.root.1
[2026-01-28 02:39:52]  *** Contents of shared directory: ***
[2026-01-28 02:39:52] total 458160
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc 280245899 Jan 28 00:08 ATLAS.root_0
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc    597782 Jan 28 00:08 input.tar.gz
[2026-01-28 02:39:52] -rw-r--r-- 2 boinc boinc     15845 Jan 28 00:08 start_atlas.sh
[2026-01-28 02:39:52] -rw------- 1 boinc boinc 186775734 Jan 28 02:26 HITS.pool.root.1
[2026-01-28 02:39:52] -rw------- 1 boinc boinc   1505280 Jan 28 02:27 result.tar.gz
02:39:54 (3842026): run_atlas exited; CPU time 31896.599235
02:39:54 (3842026): called boinc_finish(0)

</stderr_txt>
]]>

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