Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-01 12:48:42 (13380): vboxwrapper version 26210
2026-02-01 12:48:42 (13380): BOINC client version: 8.2.8
2026-02-01 12:48:43 (13380): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-01 12:48:43 (13380): Successfully copied 'init_data.xml' to the shared directory.
2026-02-01 12:48:44 (13380): Create VM. (boinc_9ce5b30d8a29b362, slot#1)
2026-02-01 12:48:44 (13380): Setting Memory Size for VM. (4400MB)
2026-02-01 12:48:44 (13380): Setting CPU Count for VM. (4)
2026-02-01 12:48:45 (13380): Setting Chipset Options for VM.
2026-02-01 12:48:45 (13380): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-01 12:48:45 (13380): Setting Boot Options for VM.
2026-02-01 12:48:46 (13380): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-01 12:48:46 (13380): Enabling VM Network Access.
2026-02-01 12:48:46 (13380): Disabling USB Support for VM.
2026-02-01 12:48:47 (13380): Disabling COM Port Support for VM.
2026-02-01 12:48:47 (13380): Disabling LPT Port Support for VM.
2026-02-01 12:48:47 (13380): Disabling Audio Support for VM.
2026-02-01 12:48:47 (13380): Disabling Clipboard Support for VM.
2026-02-01 12:48:48 (13380): Disabling Drag and Drop Support for VM.
2026-02-01 12:48:48 (13380): Adding storage controller(s) to VM.
2026-02-01 12:48:48 (13380): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-01 12:48:49 (13380): Adding VirtualBox Guest Additions to VM.
2026-02-01 12:48:49 (13380): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-01 12:48:50 (13380): forwarding host port 64492 to guest port 80
2026-02-01 12:48:50 (13380): Enabling remote desktop for VM.
2026-02-01 12:48:50 (13380): Required extension pack not installed, remote desktop not enabled.
2026-02-01 12:48:50 (13380): Enabling shared directory for VM.
2026-02-01 12:48:51 (13380): Starting VM using VBoxManage interface. (boinc_9ce5b30d8a29b362, slot#1)
2026-02-01 12:48:57 (13380): Successfully started VM. (PID = '11140')
2026-02-01 12:48:57 (13380): Reporting VM Process ID to BOINC.
2026-02-01 12:48:57 (13380): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-01 12:48:57 (13380): Guest Log: CPUID EDX: 0x178bfbff
2026-02-01 12:48:57 (13380): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-01 12:48:57 (13380): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-01 12:48:57 (13380): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-01 12:48:57 (13380): Detected: Web Application Enabled (http://localhost:64492)
2026-02-01 12:48:57 (13380): Preference change detected
2026-02-01 12:48:57 (13380): Setting CPU throttle for VM. (100%)
2026-02-01 12:48:57 (13380): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-01 12:48:59 (13380): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-01 12:48:59 (13380): Guest Log: BIOS: Booting from Hard Disk...
2026-02-01 12:49:02 (13380): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-01 12:49:02 (13380): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-01 12:49:02 (13380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-01 12:49:11 (13380): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-01 12:49:11 (13380): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-01 12:49:21 (13380): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000306 main     Log opened 2026-02-01T12:49:19.743743000Z
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000517 main     OS Product: Linux
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000570 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000617 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000665 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000667 main     Process ID: 1304
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.000668 main     Package type: LINUX_64BITS_GENERIC
2026-02-01 12:49:21 (13380): Guest Log: 00:00:00.002396 main     5.2.32 r132073 started. Verbose level = 0
2026-02-01 12:49:22 (13380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-01 12:49:22 (13380): Guest Log: [INFO] Mounting shared directory
2026-02-01 12:49:22 (13380): Guest Log: [INFO] Checking for init_data.xml
2026-02-01 12:49:28 (13380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-01 12:49:28 (13380): Guest Log: [INFO] Detected branch: prod
2026-02-01 12:49:28 (13380): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-01 12:49:28 (13380): Guest Log: Copying input files
2026-02-01 12:49:31 (13380): Guest Log: 00:00:10.005303 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 717 310 000ns (GuestNow=1 769 946 571 030 684 000 ns GuestLast=1 769 950 159 747 994 000 ns fSetTimeLastLoop=true )
2026-02-01 12:49:32 (13380): Guest Log: Copied input files into RunAtlas.
2026-02-01 12:49:33 (13380): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-01 12:49:33 (13380): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-01 12:49:33 (13380): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-01 12:49:33 (13380): Guest Log: Further information can be found at the LHC@home message board.
2026-02-01 12:49:43 (13380): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-01 12:49:43 (13380): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-01 12:49:43 (13380): Guest Log: 2.6.3.0 1581 0 30120 155749 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-01 12:49:44 (13380): Guest Log: copied the webapp to /var/www
2026-02-01 12:49:44 (13380): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-01 12:49:44 (13380): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-01 12:49:45 (13380): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-01 12:49:45 (13380): Guest Log:  *** Starting ATLAS job. (PandaID=6983306304 taskID=48318042) ***
2026-02-01 14:33:46 (13380): Status Report: Elapsed Time: '6000.652180'
2026-02-01 14:33:46 (13380): Status Report: CPU Time: '22819.375000'
2026-02-01 16:17:26 (13380): Status Report: Elapsed Time: '12001.161497'
2026-02-01 16:17:26 (13380): Status Report: CPU Time: '47523.250000'
2026-02-01 18:06:30 (13380): Status Report: Elapsed Time: '18001.900949'
2026-02-01 18:06:30 (13380): Status Report: CPU Time: '73514.250000'
2026-02-01 19:27:05 (13380): Guest Log:  *** Job finished ***
2026-02-01 19:27:05 (13380): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:28,274 | INFO     | job.realtimelogging is not enabled
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:29,306 | INFO     | [payload] run_realtimelog thread has finished
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:57,638 | INFO     | [monitor] cgroup control has ended
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:58,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364357801792)>', '<ExcThread(monitor, started 140364052670208)>']
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:59,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:26:59,482 | INFO     | [monitor] control thread has ended
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,646 | INFO     | all workflow threads have been joined
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,646 | INFO     | end of generic workflow (traces error code: 0)
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,647 | INFO     | traces error code: 0
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,799 [wrapper] ==== pilot stdout END ====
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,807 [wrapper] ==== wrapper stdout RESUME ====
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,816 [wrapper] pilotpid: 5983
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,824 [wrapper] Pilot exit status: 0
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,874 [wrapper] pandaids: 6983306304
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,930 [wrapper] cleanup supervisor_pilot 31136 5984
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,938 [wrapper] Test setup, not cleaning
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,946 [wrapper] apfmon messages muted
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,954 [wrapper] ==== wrapper stdout END ====
2026-02-01 19:27:05 (13380): Guest Log: 2026-02-01 18:27:03,960 [wrapper] ==== wrapper stderr END ====
2026-02-01 19:27:05 (13380): Guest Log:  *** Error codes and diagnostics ***
2026-02-01 19:27:05 (13380): Guest Log:     "exeErrorCode": 0,
2026-02-01 19:27:05 (13380): Guest Log:     "exeErrorDiag": "",
2026-02-01 19:27:05 (13380): Guest Log:     "pilotErrorCode": 0,
2026-02-01 19:27:05 (13380): Guest Log:     "pilotErrorDiag": "",
2026-02-01 19:27:05 (13380): Guest Log:  *** Listing of results directory ***
2026-02-01 19:27:05 (13380): Guest Log: total 186904
2026-02-01 19:27:05 (13380): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 18:47 pilot3.tar.gz
2026-02-01 19:27:05 (13380): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 18:51 runpilot2-wrapper.sh
2026-02-01 19:27:05 (13380): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 18:53 queuedata.json
2026-02-01 19:27:05 (13380): Guest Log: -rwxr-xr-x. 1 atlas atlas      8808 Feb  1 11:49 init_data.xml
2026-02-01 19:27:05 (13380): Guest Log: -rwxr-xr-x. 1 atlas atlas    597765 Feb  1 11:49 input.tar.gz
2026-02-01 19:27:05 (13380): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  1 11:49 start_atlas.sh
2026-02-01 19:27:05 (13380): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 11:49 EVNT.48318040._000030.pool.root.1 -> /data/./ATLAS.root_0
2026-02-01 19:27:05 (13380): Guest Log: -rw-r--r--. 1 atlas atlas      2532 Feb  1 11:49 pandaJob.out
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas   1010520 Feb  1 11:50 agis_schedconf.cvmfs.json
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas       426 Feb  1 11:50 workernode_map.json
2026-02-01 19:27:05 (13380): Guest Log: drwx------. 5 atlas atlas      4096 Feb  1 11:50 pilot3
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas 179919134 Feb  1 18:25 HITS.48318042._001462.pool.root.1
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas      1028 Feb  1 18:26 memory_monitor_summary.json
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas        95 Feb  1 18:26 pilot_heartbeat.json
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  1 18:26 agis_ddmendpoints.agis.ALL.json
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas    520500 Feb  1 18:26 log.48318042._001462.job.log.tgz.1
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas      6358 Feb  1 18:26 heartbeat.json
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas      4680 Feb  1 18:27 pilotlog.txt
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas   3276346 Feb  1 18:27 log.48318042._001462.job.log.1
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 18:27 output.list
2026-02-01 19:27:05 (13380): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 18:27 runtime_log
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas   3819520 Feb  1 18:27 result.tar.gz
2026-02-01 19:27:05 (13380): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb  1 18:27 runtime_log.err
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas       664 Feb  1 18:27 JSANDmfNK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYd1KDm3XGXon.diag
2026-02-01 19:27:05 (13380): Guest Log: Looking for outputfile HITS.48318042._001462.pool.root.1
2026-02-01 19:27:05 (13380): Guest Log: HITS file was successfully produced
2026-02-01 19:27:05 (13380): Guest Log: -rw-------. 1 atlas atlas 179919134 Feb  1 18:25 /home/atlas/RunAtlas/HITS.48318042._001462.pool.root.1
2026-02-01 19:27:07 (13380): Guest Log: Successfully finished the ATLAS job!
2026-02-01 19:27:07 (13380): Guest Log: Copying the results back to the shared directory!
2026-02-01 19:27:07 (13380): Guest Log:  *** Contents of shared directory: ***
2026-02-01 19:27:07 (13380): Guest Log: total 665956
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root 497568042 Feb  1 11:48 ATLAS.root_0
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root 179919134 Feb  1 18:27 HITS.pool.root.1
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root      8808 Feb  1 11:48 init_data.xml
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root    597765 Jan 26 20:21 input.tar.gz
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root   3819520 Feb  1 18:27 result.tar.gz
2026-02-01 19:27:07 (13380): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 20:21 start_atlas.sh
2026-02-01 19:27:07 (13380): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-01 19:27:07 (13380): VM Completion File Detected.
2026-02-01 19:27:07 (13380): Powering off VM.
2026-02-01 19:27:08 (13380): Successfully stopped VM.
2026-02-01 19:27:08 (13380): Deregistering VM. (boinc_9ce5b30d8a29b362, slot#1)
2026-02-01 19:27:08 (13380): Removing network bandwidth throttle group from VM.
2026-02-01 19:27:09 (13380): Removing VM from VirtualBox.
2026-02-01 19:27:14 (13380): called boinc_finish(0)

</stderr_txt>
]]>

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