Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:02:44 (12419): wrapper (7.7.26015): starting
06:02:44 (12419): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 06:02:45] Arguments: --nthreads 8
[2026-01-27 06:02:45] Threads: 8
[2026-01-27 06:02:45] Checking for CVMFS
[2026-01-27 06:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 06:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 06:02:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 06:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 06:02:48] 2.11.2.0 14173 60888 132776 155573 1 54 22967836 25165825 899 130560 0 22844270 99.810 16201639 3477 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 06:02:48] CVMFS is ok
[2026-01-27 06:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 06:02:48] Checking for apptainer binary...
[2026-01-27 06:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 06:02:48] Running /usr/bin/apptainer --version
[2026-01-27 06:02:48] apptainer version 1.3.2-1.el7
[2026-01-27 06:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 06:02:53] cg-vwn375.simple-grid.lan
[2026-01-27 06:02:53] apptainer works
[2026-01-27 06:02:53] Set ATHENA_PROC_NUMBER=8
[2026-01-27 06:02:53] Set ATHENA_CORE_NUMBER=8
[2026-01-27 06:02:53] Starting ATLAS job with PandaID=6983602291
[2026-01-27 06:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 12:29:00]  *** The last 200 lines of the pilot log: ***
[2026-01-27 12:29:00] 2026-01-27 11:28:07,846 | INFO     | extracted standard info from prmon json
[2026-01-27 12:29:00] 2026-01-27 11:28:07,846 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 12:29:00] 2026-01-27 11:28:07,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 12:29:00] 2026-01-27 11:28:07,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 12:29:00] 2026-01-27 11:28:07,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 12:29:00] 2026-01-27 11:28:07,855 | INFO     | fitting pss+swap vs Time
[2026-01-27 12:29:00] 2026-01-27 11:28:07,856 | INFO     | sum of square deviations: 15453208812.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,871 | INFO     | sum of deviations: 82823902778.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,871 | INFO     | mean x: 1769502033.5
[2026-01-27 12:29:00] 2026-01-27 11:28:07,872 | INFO     | mean y: 2487515.152173913
[2026-01-27 12:29:00] 2026-01-27 11:28:07,872 | INFO     | intersect: -9481436902.815323
[2026-01-27 12:29:00] 2026-01-27 11:28:07,872 | INFO     | chi2: 8.045688941515863
[2026-01-27 12:29:00] 2026-01-27 11:28:07,873 | INFO     | sum of square deviations: 14831839022.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,878 | INFO     | sum of deviations: 106503259514.00003
[2026-01-27 12:29:00] 2026-01-27 11:28:07,878 | INFO     | mean x: 1769501881.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,878 | INFO     | mean y: 2493260.5592286503
[2026-01-27 12:29:00] 2026-01-27 11:28:07,878 | INFO     | intersect: -12703801472.219067
[2026-01-27 12:29:00] 2026-01-27 11:28:07,879 | INFO     | chi2: 7.322550833451397
[2026-01-27 12:29:00] 2026-01-27 11:28:07,879 | INFO     | current chi2=7.322550833451397 (change=8.987895422268478 %)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,879 | INFO     | right removable region: 362
[2026-01-27 12:29:00] 2026-01-27 11:28:07,880 | INFO     | sum of square deviations: 14831839022.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,884 | INFO     | sum of deviations: -48677615028.999985
[2026-01-27 12:29:00] 2026-01-27 11:28:07,885 | INFO     | mean x: 1769502186.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,885 | INFO     | mean y: 2519775.245179063
[2026-01-27 12:29:00] 2026-01-27 11:28:07,885 | INFO     | intersect: 5809968607.134336
[2026-01-27 12:29:00] 2026-01-27 11:28:07,886 | INFO     | chi2: 3.157555819832198
[2026-01-27 12:29:00] 2026-01-27 11:28:07,886 | INFO     | current chi2=3.157555819832198 (change=60.75468685423361 %)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,886 | INFO     | sum of square deviations: 14227353269.5
[2026-01-27 12:29:00] 2026-01-27 11:28:07,901 | INFO     | sum of deviations: -130360201462.99995
[2026-01-27 12:29:00] 2026-01-27 11:28:07,901 | INFO     | mean x: 1769502338.5
[2026-01-27 12:29:00] 2026-01-27 11:28:07,902 | INFO     | mean y: 2540330.8324022344
[2026-01-27 12:29:00] 2026-01-27 11:28:07,902 | INFO     | intersect: 16215863846.92277
[2026-01-27 12:29:00] 2026-01-27 11:28:07,902 | INFO     | chi2: 1.1252065647449452
[2026-01-27 12:29:00] 2026-01-27 11:28:07,903 | INFO     | current chi2=1.1252065647449452 (change=64.36463426306926 %)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,903 | INFO     | sum of square deviations: 13639518992.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,907 | INFO     | sum of deviations: -137028970403.99995
[2026-01-27 12:29:00] 2026-01-27 11:28:07,908 | INFO     | mean x: 1769502491.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,908 | INFO     | mean y: 2542044.2776203966
[2026-01-27 12:29:00] 2026-01-27 11:28:07,908 | INFO     | intersect: 17779789512.554268
[2026-01-27 12:29:00] 2026-01-27 11:28:07,909 | INFO     | chi2: 1.0716000425584657
[2026-01-27 12:29:00] 2026-01-27 11:28:07,909 | INFO     | current chi2=1.0716000425584657 (change=4.764149434075745 %)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,909 | INFO     | left removable region: 30
[2026-01-27 12:29:00] 2026-01-27 11:28:07,909 | INFO     | sum of square deviations: 11347200663.0
[2026-01-27 12:29:00] 2026-01-27 11:28:07,913 | INFO     | sum of deviations: -79096148583.49998
[2026-01-27 12:29:00] 2026-01-27 11:28:07,914 | INFO     | mean x: 1769502765.5
[2026-01-27 12:29:00] 2026-01-27 11:28:07,914 | INFO     | mean y: 2539822.8524096385
[2026-01-27 12:29:00] 2026-01-27 11:28:07,914 | INFO     | intersect: 12336934693.939404
[2026-01-27 12:29:00] 2026-01-27 11:28:07,914 | INFO     | chi2: 0.2500854163358645
[2026-01-27 12:29:00] 2026-01-27 11:28:07,915 | INFO     | current memory leak: -6.97 B/s (using 332 data points, chi2=0.25)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,915 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | ..............................
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . Timing measurements:
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . get job = 0 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . initial setup = 120 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . payload setup = 150 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . stage-in = 0 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,916 | INFO     | . payload execution = 22557 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,921 | INFO     | . stage-out = 6 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,921 | INFO     | . log creation = 1 s
[2026-01-27 12:29:00] 2026-01-27 11:28:07,921 | INFO     | ..............................
[2026-01-27 12:29:00] 2026-01-27 11:28:08,072 | INFO     | PID=16446 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,072 | INFO     | .. there are 2 such processes running
[2026-01-27 12:29:00] 2026-01-27 11:28:08,160 | INFO     | 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,160 | INFO     | job summary report
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | --------------------------------------------------
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | PanDA job id: 6983602291
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | task id: 48329598
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | errors: (none)
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | pilot state: finished 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | transexitcode: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | exeerrorcode: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | exeerrordiag: 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | exitcode: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | exitmsg: OK
[2026-01-27 12:29:00] 2026-01-27 11:28:08,161 | INFO     | cpuconsumptiontime: 86722 s
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | nevents: 400
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | neventsw: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | pid: 20878
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | pgrp: 20878
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | corecount: 8
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | event service: False
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | sizes: {0: 2283267, 1: 2234373, 2: 2284413, 13: 2284413, 22711: 2318955, 22719: 2327953, 22721: 2328137, 22723: 2328331}
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | --------------------------------------------------
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | 
[2026-01-27 12:29:00] 2026-01-27 11:28:08,162 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-27 12:29:00] 2026-01-27 11:28:08,661 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,661 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,663 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 12:29:00] 2026-01-27 11:28:08,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,664 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 12:29:00] 2026-01-27 11:28:08,664 | INFO     | job 6983602291 has completed (purged errors)
[2026-01-27 12:29:00] 2026-01-27 11:28:08,664 | INFO     | overall cleanup function is called
[2026-01-27 12:29:00] 2026-01-27 11:28:09,673 | INFO     | --- collectZombieJob: --- 10, [20878]
[2026-01-27 12:29:00] 2026-01-27 11:28:09,673 | INFO     | zombie collector waiting for pid 20878
[2026-01-27 12:29:00] 2026-01-27 11:28:09,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 12:29:00] 2026-01-27 11:28:09,673 | INFO     | collected zombie processes
[2026-01-27 12:29:00] 2026-01-27 11:28:09,673 | INFO     | will attempt to kill all subprocesses of pid=20878
[2026-01-27 12:29:00] 2026-01-27 11:28:09,764 | INFO     | process IDs to be killed: [20878] (in reverse order)
[2026-01-27 12:29:00] 2026-01-27 11:28:10,767 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 12:29:00] 2026-01-27 11:28:10,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 12:29:00] 2026-01-27 11:28:10,770 | INFO     | did not find any defunct processes belonging to 20878
[2026-01-27 12:29:00] 2026-01-27 11:28:10,771 | INFO     | did not find any defunct processes belonging to 20878
[2026-01-27 12:29:00] 2026-01-27 11:28:10,772 | INFO     | ready for new job
[2026-01-27 12:29:00] 2026-01-27 11:28:10,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 12:29:00] 2026-01-27 11:28:10,774 | INFO     | **************************************
[2026-01-27 12:29:00] 2026-01-27 11:28:10,774 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 12:29:00] 2026-01-27 11:28:10,781 | INFO     | **************************************
[2026-01-27 12:29:00] 2026-01-27 11:28:10,781 | INFO     | 
[2026-01-27 12:29:00] 2026-01-27 11:28:10,782 | INFO     | pilot is running in a VM
[2026-01-27 12:29:00] 2026-01-27 11:28:10,782 | INFO     | architecture information:
[2026-01-27 12:29:00] 2026-01-27 11:28:10,796 | INFO     | executing command: cat /etc/os-release
[2026-01-27 12:29:00] 2026-01-27 11:28:11,096 | INFO     | cat /etc/os-release:
[2026-01-27 12:29:00] NAME="CentOS Linux"
[2026-01-27 12:29:00] VERSION="7 (Core)"
[2026-01-27 12:29:00] ID="centos"
[2026-01-27 12:29:00] ID_LIKE="rhel fedora"
[2026-01-27 12:29:00] VERSION_ID="7"
[2026-01-27 12:29:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 12:29:00] ANSI_COLOR="0;31"
[2026-01-27 12:29:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 12:29:00] HOME_URL="https://www.centos.org/"
[2026-01-27 12:29:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 12:29:00] 
[2026-01-27 12:29:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 12:29:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 12:29:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 12:29:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 12:29:00] 
[2026-01-27 12:29:00] 2026-01-27 11:28:11,096 | INFO     | **************************************
[2026-01-27 12:29:00] 2026-01-27 11:28:11,601 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-27 12:29:00] 2026-01-27 11:28:11,815 | INFO     | sufficient remaining disk space (496597204992 B)
[2026-01-27 12:29:00] 2026-01-27 11:28:11,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 12:29:00] 2026-01-27 11:28:11,815 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 12:29:00] 2026-01-27 11:28:11,815 | INFO     | update_server=False
[2026-01-27 12:29:00] 2026-01-27 11:28:11,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 12:29:00] 2026-01-27 11:28:11,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 12:29:00] 2026-01-27 11:28:12,066 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 12:29:00] 2026-01-27 11:28:12,066 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 12:29:00] 2026-01-27 11:28:12,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:29:00] 2026-01-27 11:28:12,066 | INFO     | will abort loop
[2026-01-27 12:29:00] 2026-01-27 11:28:12,435 | INFO     | all data control threads have been joined
[2026-01-27 12:29:00] 2026-01-27 11:28:12,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 12:29:00] 2026-01-27 11:28:12,659 | INFO     | all job control threads have been joined
[2026-01-27 12:29:00] 2026-01-27 11:28:12,822 | INFO     | [job] retrieve thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,016 | INFO     | all payload control threads have been joined
[2026-01-27 12:29:00] 2026-01-27 11:28:13,071 | INFO     | [job] job monitor thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:29:00] 2026-01-27 11:28:13,404 | INFO     | [payload] validate_post thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,441 | INFO     | [data] control thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,663 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,665 | INFO     | [job] control thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,701 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,808 | INFO     | [job] validate thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,832 | INFO     | [data] copytool_in thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,844 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:13,954 | INFO     | [data] copytool_out thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:14,022 | INFO     | [payload] control thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:14,140 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:14,186 | INFO     | [job] queue monitor thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:14,218 | INFO     | [payload] failed_post thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:16,644 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 12:29:00] 2026-01-27 11:28:40,194 | INFO     | PID=16446 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 12:29:00] 2026-01-27 11:28:40,194 | INFO     | .. there are 2 such processes running
[2026-01-27 12:29:00] 2026-01-27 11:28:40,195 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 12:29:00] 2026-01-27 11:28:40,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 12:29:00] 2026-01-27 11:28:40,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 12:29:00] 2026-01-27 11:28:50,453 | INFO     | [monitor] cgroup control has ended
[2026-01-27 12:29:00] 2026-01-27 11:28:50,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063132903232)>', '<ExcThread(monitor, started 140062532544256)>']
[2026-01-27 12:29:00] 2026-01-27 11:28:51,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 12:29:00] 2026-01-27 11:28:51,261 | INFO     | [monitor] control thread has ended
[2026-01-27 12:29:00] 2026-01-27 11:28:55,918 | INFO     | all workflow threads have been joined
[2026-01-27 12:29:00] 2026-01-27 11:28:55,918 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 12:29:00] 2026-01-27 11:28:55,918 | INFO     | traces error code: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:55,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 12:29:00] 2026-01-27 11:28:56,318 [wrapper] ==== pilot stdout END ====
[2026-01-27 12:29:00] 2026-01-27 11:28:56,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 12:29:00] 2026-01-27 11:28:56,507 [wrapper] pilotpid: 16446
[2026-01-27 12:29:00] 2026-01-27 11:28:56,630 [wrapper] Pilot exit status: 0
[2026-01-27 12:29:00] 2026-01-27 11:28:57,016 [wrapper] pandaids: 6983602291
[2026-01-27 12:29:00] 2026-01-27 11:28:57,422 [wrapper] cleanup supervisor_pilot 27774 16447
[2026-01-27 12:29:00] 2026-01-27 11:28:57,470 [wrapper] Test setup, not cleaning
[2026-01-27 12:29:00] 2026-01-27 11:28:57,485 [wrapper] apfmon messages muted
[2026-01-27 12:29:00] 2026-01-27 11:28:57,555 [wrapper] ==== wrapper stdout END ====
[2026-01-27 12:29:00] 2026-01-27 11:28:57,668 [wrapper] ==== wrapper stderr END ====
[2026-01-27 12:29:00]  *** Error codes and diagnostics ***
[2026-01-27 12:29:00]     "exeErrorCode": 0,
[2026-01-27 12:29:00]     "exeErrorDiag": "",
[2026-01-27 12:29:00]     "pilotErrorCode": 0,
[2026-01-27 12:29:00]     "pilotErrorDiag": "",
[2026-01-27 12:29:00]  *** Listing of results directory ***
[2026-01-27 12:29:00] total 460180
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 12:29:00] -rwx------. 1 boinc boinc     36322 Jan 26 02:15 runpilot2-wrapper.sh
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc      5111 Jan 26 02:18 queuedata.json
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc       100 Jan 27 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 12:29:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 06:02 run_atlas
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc       105 Jan 27 06:02 job.xml
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc      6391 Jan 27 06:02 init_data.xml
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc 273017393 Jan 27 06:02 EVNT.48329596._000005.pool.root.1
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc     15845 Jan 27 06:02 start_atlas.sh
[2026-01-27 12:29:00] drwxrwx--x. 2 boinc boinc        68 Jan 27 06:02 shared
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc    597776 Jan 27 06:02 input.tar.gz
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc         0 Jan 27 06:02 boinc_lockfile
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc      2607 Jan 27 06:02 pandaJob.out
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc       415 Jan 27 06:09 workernode_map.json
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc   1006441 Jan 27 06:09 agis_schedconf.cvmfs.json
[2026-01-27 12:29:00] drwx------. 5 boinc boinc      4096 Jan 27 06:09 pilot3
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc 186802424 Jan 27 12:26 HITS.48329598._000106.pool.root.1
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc       531 Jan 27 12:26 boinc_task_state.xml
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc      1014 Jan 27 12:27 memory_monitor_summary.json
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc   1516246 Jan 27 12:28 agis_ddmendpoints.agis.ALL.json
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc    569152 Jan 27 12:28 log.48329598._000106.job.log.tgz.1
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc        95 Jan 27 12:28 pilot_heartbeat.json
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc      6306 Jan 27 12:28 heartbeat.json
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc        28 Jan 27 12:28 wrapper_checkpoint.txt
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc      8192 Jan 27 12:28 boinc_mmap_file
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc      5066 Jan 27 12:28 pilotlog.txt
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc   3167635 Jan 27 12:28 log.48329598._000106.job.log.1
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc       357 Jan 27 12:28 output.list
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc       620 Jan 27 12:28 runtime_log
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc   3758080 Jan 27 12:28 result.tar.gz
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc      8816 Jan 27 12:29 runtime_log.err
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc       656 Jan 27 12:29 B3CMDmONQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwp8KDmevq0Em.diag
[2026-01-27 12:29:00] -rw-r--r--. 1 boinc boinc     20727 Jan 27 12:29 stderr.txt
[2026-01-27 12:29:00] HITS file was successfully produced:
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc 186802424 Jan 27 12:26 shared/HITS.pool.root.1
[2026-01-27 12:29:00]  *** Contents of shared directory: ***
[2026-01-27 12:29:00] total 453320
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc 273017393 Jan 27 06:02 ATLAS.root_0
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc     15845 Jan 27 06:02 start_atlas.sh
[2026-01-27 12:29:00] -rw-r--r--. 2 boinc boinc    597776 Jan 27 06:02 input.tar.gz
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc 186802424 Jan 27 12:26 HITS.pool.root.1
[2026-01-27 12:29:00] -rw-------. 1 boinc boinc   3758080 Jan 27 12:28 result.tar.gz
12:29:02 (12419): run_atlas exited; CPU time 86968.433491
12:29:02 (12419): called boinc_finish(0)

</stderr_txt>
]]>

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