Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:16 (25831): wrapper (7.7.26015): starting
15:00:16 (25831): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 15:00:16] Arguments: --nthreads 12
[2026-01-26 15:00:16] Threads: 12
[2026-01-26 15:00:16] Checking for CVMFS
[2026-01-26 15:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:00:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:00:17] 2.11.2.0 28623 368598 98248 155560 2 50 12346220 20275200 1 130560 4 158894009 99.949 21682346 16439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 15:00:17] CVMFS is ok
[2026-01-26 15:00:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 15:00:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 15:00:17] Further information can be found at the LHC@home message board.
[2026-01-26 15:00:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:00:17] Checking for apptainer binary...
[2026-01-26 15:00:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:00:17] Running /usr/bin/apptainer --version
[2026-01-26 15:00:17] apptainer version 1.3.2-1.el7
[2026-01-26 15:00:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:00:18] c-205-20.aglt2.org
[2026-01-26 15:00:18] apptainer works
[2026-01-26 15:00:18] Set ATHENA_PROC_NUMBER=12
[2026-01-26 15:00:18] Set ATHENA_CORE_NUMBER=12
[2026-01-26 15:00:18] Starting ATLAS job with PandaID=6984043323
[2026-01-26 15:00:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 16:20:52]  *** The last 200 lines of the pilot log: ***
[2026-01-26 16:20:52]  is_altstaged=None
[2026-01-26 16:20:52]  is_tar=False
[2026-01-26 16:20:52]  lfn=log.48317911._000672.job.log.tgz.1
[2026-01-26 16:20:52]  mtime=0
[2026-01-26 16:20:52]  protocol_id=None
[2026-01-26 16:20:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 16:20:52]  replicas=None
[2026-01-26 16:20:52]  scope=mc23_13p6TeV
[2026-01-26 16:20:52]  status=None
[2026-01-26 16:20:52]  status_code=0
[2026-01-26 16:20:52]  storage_token=
[2026-01-26 16:20:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6984043323/log.48317911._000672.job.log.tgz.1
[2026-01-26 16:20:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/2c/log.48317911._000672.job.log.tgz.1
[2026-01-26 16:20:52]  workdir=None
[2026-01-26 16:20:52] ]
[2026-01-26 16:20:52] 2026-01-26 21:20:09,073 | INFO     | transferring file log.48317911._000672.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6984043323/log.48317911._000672.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 16:20:52] 2026-01-26 21:20:09,073 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6984043323/log.48317911._000672.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317911._000672.job
[2026-01-26 16:20:52] 2026-01-26 21:20:09,095 | INFO     | adding to output.list: log.48317911._000672.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/2c/log.48317911._000672.job.log.tg
[2026-01-26 16:20:52] 2026-01-26 21:20:09,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 16:20:52] 2026-01-26 21:20:09,096 | INFO     | summary of transferred files:
[2026-01-26 16:20:52] 2026-01-26 21:20:09,097 | INFO     |  -- lfn=log.48317911._000672.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 16:20:52] 2026-01-26 21:20:09,097 | INFO     | stage-out finished correctly
[2026-01-26 16:20:52] 2026-01-26 21:20:09,179 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 16:20:52] 2026-01-26 21:20:10,417 | INFO     | time since job start (4771s) is within the limit (349056.0s)
[2026-01-26 16:20:52] 2026-01-26 21:20:10,964 | INFO     | job 6984043323 has state=finished
[2026-01-26 16:20:52] 2026-01-26 21:20:10,964 | INFO     | preparing for final server update for job 6984043323 in state='finished'
[2026-01-26 16:20:52] 2026-01-26 21:20:11,027 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,028 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6984043323/jobReport.json
[2026-01-26 16:20:52] 2026-01-26 21:20:11,030 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 16:20:52] 2026-01-26 21:20:11,030 | INFO     | this job has now completed (state=finished)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,031 | INFO     | log transfer has been attempted: DONE
[2026-01-26 16:20:52] 2026-01-26 21:20:11,031 | INFO     | job 6984043323 has finished - writing final server update
[2026-01-26 16:20:52] 2026-01-26 21:20:11,031 | INFO     | total number of processed events: 400 (read)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6984043323/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,033 | INFO     | extracted standard info from prmon json
[2026-01-26 16:20:52] 2026-01-26 21:20:11,033 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 16:20:52] 2026-01-26 21:20:11,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 16:20:52] 2026-01-26 21:20:11,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 16:20:52] 2026-01-26 21:20:11,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 16:20:52] 2026-01-26 21:20:11,035 | INFO     | fitting pss+swap vs Time
[2026-01-26 16:20:52] 2026-01-26 21:20:11,036 | INFO     | sum of square deviations: 110960220.0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,036 | INFO     | sum of deviations: -2629670716.0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,036 | INFO     | mean x: 1769460103.0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,036 | INFO     | mean y: 2711562.8309859154
[2026-01-26 16:20:52] 2026-01-26 21:20:11,036 | INFO     | intersect: 41937536637.88441
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | chi2: 0.06594230279424802
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | current memory leak: -23.70 B/s (using 71 data points, chi2=0.07)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | ..............................
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | . Timing measurements:
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | . get job = 0 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,037 | INFO     | . initial setup = 7 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | . payload setup = 7 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | . stage-in = 0 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | . payload execution = 4746 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | . stage-out = 0 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | . log creation = 0 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,038 | INFO     | ..............................
[2026-01-26 16:20:52] 2026-01-26 21:20:11,116 | INFO     | 
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | job summary report
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | --------------------------------------------------
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | PanDA job id: 6984043323
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | task id: 48317911
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | errors: (none)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 16:20:52] 2026-01-26 21:20:11,117 | INFO     | pilot state: finished 
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | transexitcode: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | exeerrorcode: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | exeerrordiag: 
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | exitcode: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | exitmsg: OK
[2026-01-26 16:20:52] 2026-01-26 21:20:11,118 | INFO     | cpuconsumptiontime: 51888 s
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | nevents: 400
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | neventsw: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | pid: 1943
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | pgrp: 1943
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | corecount: 12
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | event service: False
[2026-01-26 16:20:52] 2026-01-26 21:20:11,119 | INFO     | sizes: {0: 2283112, 1: 2284230, 12: 2284230, 4757: 2310384, 4758: 2319438, 4760: 2319576}
[2026-01-26 16:20:52] 2026-01-26 21:20:11,120 | INFO     | --------------------------------------------------
[2026-01-26 16:20:52] 2026-01-26 21:20:11,120 | INFO     | 
[2026-01-26 16:20:52] 2026-01-26 21:20:11,120 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 16:20:52] 2026-01-26 21:20:11,142 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 16:20:52] 2026-01-26 21:20:11,146 | INFO     | job 6984043323 has completed (purged errors)
[2026-01-26 16:20:52] 2026-01-26 21:20:11,146 | INFO     | overall cleanup function is called
[2026-01-26 16:20:52] 2026-01-26 21:20:11,546 | INFO     | PID=29816 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 16:20:52] 2026-01-26 21:20:12,151 | INFO     | --- collectZombieJob: --- 10, [1943]
[2026-01-26 16:20:52] 2026-01-26 21:20:12,151 | INFO     | zombie collector waiting for pid 1943
[2026-01-26 16:20:52] 2026-01-26 21:20:12,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 16:20:52] 2026-01-26 21:20:12,151 | INFO     | collected zombie processes
[2026-01-26 16:20:52] 2026-01-26 21:20:12,151 | INFO     | will attempt to kill all subprocesses of pid=1943
[2026-01-26 16:20:52] 2026-01-26 21:20:12,244 | INFO     | process IDs to be killed: [1943] (in reverse order)
[2026-01-26 16:20:52] 2026-01-26 21:20:12,299 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 16:20:52] 2026-01-26 21:20:12,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 16:20:52] 2026-01-26 21:20:12,303 | INFO     | did not find any defunct processes belonging to 1943
[2026-01-26 16:20:52] 2026-01-26 21:20:12,307 | INFO     | did not find any defunct processes belonging to 1943
[2026-01-26 16:20:52] 2026-01-26 21:20:12,307 | INFO     | ready for new job
[2026-01-26 16:20:52] 2026-01-26 21:20:12,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 16:20:52] 2026-01-26 21:20:12,309 | INFO     | **************************************
[2026-01-26 16:20:52] 2026-01-26 21:20:12,309 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 16:20:52] 2026-01-26 21:20:12,309 | INFO     | **************************************
[2026-01-26 16:20:52] 2026-01-26 21:20:12,309 | INFO     | 
[2026-01-26 16:20:52] 2026-01-26 21:20:12,310 | INFO     | architecture information:
[2026-01-26 16:20:52] 2026-01-26 21:20:12,310 | INFO     | executing command: cat /etc/os-release
[2026-01-26 16:20:52] 2026-01-26 21:20:12,325 | INFO     | cat /etc/os-release:
[2026-01-26 16:20:52] NAME="CentOS Linux"
[2026-01-26 16:20:52] VERSION="7 (Core)"
[2026-01-26 16:20:52] ID="centos"
[2026-01-26 16:20:52] ID_LIKE="rhel fedora"
[2026-01-26 16:20:52] VERSION_ID="7"
[2026-01-26 16:20:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 16:20:52] ANSI_COLOR="0;31"
[2026-01-26 16:20:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 16:20:52] HOME_URL="https://www.centos.org/"
[2026-01-26 16:20:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 16:20:52] 
[2026-01-26 16:20:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 16:20:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 16:20:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 16:20:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 16:20:52] 
[2026-01-26 16:20:52] 2026-01-26 21:20:12,325 | INFO     | **************************************
[2026-01-26 16:20:52] 2026-01-26 21:20:12,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 16:20:52] 2026-01-26 21:20:12,844 | INFO     | sufficient remaining disk space (28682747904 B)
[2026-01-26 16:20:52] 2026-01-26 21:20:12,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 16:20:52] 2026-01-26 21:20:12,845 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 16:20:52] 2026-01-26 21:20:12,845 | INFO     | update_server=False
[2026-01-26 16:20:52] 2026-01-26 21:20:12,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 16:20:52] 2026-01-26 21:20:12,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:20:52] 2026-01-26 21:20:12,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 16:20:52] 2026-01-26 21:20:13,693 | INFO     | all data control threads have been joined
[2026-01-26 16:20:52] 2026-01-26 21:20:13,851 | INFO     | [job] retrieve thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:13,851 | INFO     | [job] queue monitor thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:14,048 | INFO     | all payload control threads have been joined
[2026-01-26 16:20:52] 2026-01-26 21:20:14,087 | INFO     | [data] copytool_in thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:14,446 | INFO     | all job control threads have been joined
[2026-01-26 16:20:52] 2026-01-26 21:20:14,450 | WARNING  | process 1943 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 16:20:52] 2026-01-26 21:20:14,523 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 16:20:52] 2026-01-26 21:20:14,609 | INFO     | number of running child processes to parent process 1943: 1
[2026-01-26 16:20:52] 2026-01-26 21:20:14,610 | INFO     | maximum number of monitored processes: 6
[2026-01-26 16:20:52] 2026-01-26 21:20:14,610 | INFO     | aborting job monitoring since job object (job id=6984043323) has expired
[2026-01-26 16:20:52] 2026-01-26 21:20:14,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:20:52] 2026-01-26 21:20:14,610 | INFO     | will abort loop
[2026-01-26 16:20:52] 2026-01-26 21:20:14,698 | INFO     | [data] control thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:14,790 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:14,851 | INFO     | [data] copytool_out thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:14,910 | INFO     | [job] validate thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,033 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,035 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,054 | INFO     | [payload] control thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 16:20:52] 2026-01-26 21:20:15,285 | INFO     | [payload] validate_post thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,439 | INFO     | [payload] failed_post thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,451 | INFO     | [job] control thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:15,615 | INFO     | [job] job monitor thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:19,267 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:23,012 | INFO     | job.realtimelogging is not enabled
[2026-01-26 16:20:52] 2026-01-26 21:20:24,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 16:20:52] 2026-01-26 21:20:43,743 | INFO     | PID=29816 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 16:20:52] 2026-01-26 21:20:43,743 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 16:20:52] 2026-01-26 21:20:43,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 16:20:52] 2026-01-26 21:20:43,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 16:20:52] 2026-01-26 21:20:46,335 | INFO     | [monitor] cgroup control has ended
[2026-01-26 16:20:52] 2026-01-26 21:20:47,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914720954176)>', '<ExcThread(monitor, started 139913894803200)>']
[2026-01-26 16:20:52] 2026-01-26 21:20:47,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 16:20:52] 2026-01-26 21:20:47,755 | INFO     | [monitor] control thread has ended
[2026-01-26 16:20:52] 2026-01-26 21:20:52,114 | INFO     | all workflow threads have been joined
[2026-01-26 16:20:52] 2026-01-26 21:20:52,114 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 16:20:52] 2026-01-26 21:20:52,115 | INFO     | traces error code: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:52,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 16:20:52] 2026-01-26 21:20:52,209 [wrapper] ==== pilot stdout END ====
[2026-01-26 16:20:52] 2026-01-26 21:20:52,212 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 16:20:52] 2026-01-26 21:20:52,215 [wrapper] pilotpid: 29816
[2026-01-26 16:20:52] 2026-01-26 21:20:52,219 [wrapper] Pilot exit status: 0
[2026-01-26 16:20:52] 2026-01-26 21:20:52,234 [wrapper] pandaids: 6984043323
[2026-01-26 16:20:52] 2026-01-26 21:20:52,275 [wrapper] cleanup supervisor_pilot 23761 29817
[2026-01-26 16:20:52] 2026-01-26 21:20:52,278 [wrapper] Test setup, not cleaning
[2026-01-26 16:20:52] 2026-01-26 21:20:52,282 [wrapper] apfmon messages muted
[2026-01-26 16:20:52] 2026-01-26 21:20:52,286 [wrapper] ==== wrapper stdout END ====
[2026-01-26 16:20:52] 2026-01-26 21:20:52,290 [wrapper] ==== wrapper stderr END ====
[2026-01-26 16:20:52]  *** Error codes and diagnostics ***
[2026-01-26 16:20:52]     "exeErrorCode": 0,
[2026-01-26 16:20:52]     "exeErrorDiag": "",
[2026-01-26 16:20:52]     "pilotErrorCode": 0,
[2026-01-26 16:20:52]     "pilotErrorDiag": "",
[2026-01-26 16:20:52]  *** Listing of results directory ***
[2026-01-26 16:20:52] total 732544
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 16:20:52] -rwx------ 1 boincer umatlas     36322 Jan 26 00:14 runpilot2-wrapper.sh
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 00:15 queuedata.json
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas       100 Jan 26 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 16:20:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 15:00 run_atlas
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas       105 Jan 26 15:00 job.xml
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas 544183965 Jan 26 15:00 EVNT.48317909._000023.pool.root.1
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 15:00 start_atlas.sh
[2026-01-26 16:20:52] drwxrwx--x 2 boincer umatlas      4096 Jan 26 15:00 shared
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas    597753 Jan 26 15:00 input.tar.gz
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas         0 Jan 26 15:00 boinc_lockfile
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas      2496 Jan 26 15:00 pandaJob.out
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas        57 Jan 26 15:00 setup.sh.local
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas   1006449 Jan 26 15:00 agis_schedconf.cvmfs.json
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas   1516246 Jan 26 15:00 agis_ddmendpoints.agis.ALL.json
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas       445 Jan 26 15:00 workernode_map.json
[2026-01-26 16:20:52] drwx------ 5 boincer umatlas      4096 Jan 26 15:00 pilot3
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 16:09 init_data.xml
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas 199867943 Jan 26 16:19 HITS.48317911._000672.pool.root.1
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas       530 Jan 26 16:19 boinc_task_state.xml
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas      1057 Jan 26 16:20 memory_monitor_summary.json
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas    375507 Jan 26 16:20 log.48317911._000672.job.log.tgz.1
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas      6411 Jan 26 16:20 heartbeat.json
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas        95 Jan 26 16:20 pilot_heartbeat.json
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 16:20 boinc_mmap_file
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas        27 Jan 26 16:20 wrapper_checkpoint.txt
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas      5329 Jan 26 16:20 pilotlog.txt
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas    691592 Jan 26 16:20 log.48317911._000672.job.log.1
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas       357 Jan 26 16:20 output.list
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas       620 Jan 26 16:20 runtime_log
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas   1085440 Jan 26 16:20 result.tar.gz
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 16:20 runtime_log.err
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas       659 Jan 26 16:20 MlWKDmK7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhY2KDm9Rz1lm.diag
[2026-01-26 16:20:52] -rw-r--r-- 1 boincer umatlas     21548 Jan 26 16:20 stderr.txt
[2026-01-26 16:20:52] HITS file was successfully produced:
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas 199867943 Jan 26 16:19 shared/HITS.pool.root.1
[2026-01-26 16:20:52]  *** Contents of shared directory: ***
[2026-01-26 16:20:52] total 728280
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas 544183965 Jan 26 15:00 ATLAS.root_0
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 15:00 start_atlas.sh
[2026-01-26 16:20:52] -rw-r--r-- 2 boincer umatlas    597753 Jan 26 15:00 input.tar.gz
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas 199867943 Jan 26 16:19 HITS.pool.root.1
[2026-01-26 16:20:52] -rw------- 1 boincer umatlas   1085440 Jan 26 16:20 result.tar.gz
16:20:53 (25831): run_atlas exited; CPU time 51867.093242
16:20:53 (25831): called boinc_finish(0)

</stderr_txt>
]]>

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