Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:11:22 (156185): wrapper (7.7.26015): starting
00:11:22 (156185): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 00:11:22] Arguments: --nthreads 12
[2026-01-27 00:11:22] Threads: 12
[2026-01-27 00:11:22] Checking for CVMFS
[2026-01-27 00:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:11:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:11:23] 2.13.3.0 6794 131 41804 155574 0 188 5414696 6144000 3659 130560 0 481252 99.996 5569 589 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 00:11:23] CVMFS is ok
[2026-01-27 00:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:11:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 00:11:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 00:11:23] Further information can be found at the LHC@home message board.
[2026-01-27 00:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:11:23] Checking for apptainer binary...
[2026-01-27 00:11:23] apptainer is not installed, using version from CVMFS
[2026-01-27 00:11:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:11:24] XeonFire
[2026-01-27 00:11:24] apptainer works
[2026-01-27 00:11:24] Set ATHENA_PROC_NUMBER=12
[2026-01-27 00:11:24] Set ATHENA_CORE_NUMBER=12
[2026-01-27 00:11:24] Starting ATLAS job with PandaID=6983602782
[2026-01-27 00:11:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:46:59]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:46:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 01:46:59]  is_altstaged=None
[2026-01-27 01:46:59]  is_tar=False
[2026-01-27 01:46:59]  lfn=log.48329616._000118.job.log.tgz.1
[2026-01-27 01:46:59]  mtime=0
[2026-01-27 01:46:59]  protocol_id=None
[2026-01-27 01:46:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 01:46:59]  replicas=None
[2026-01-27 01:46:59]  scope=mc23_13p6TeV
[2026-01-27 01:46:59]  status=None
[2026-01-27 01:46:59]  status_code=0
[2026-01-27 01:46:59]  storage_token=
[2026-01-27 01:46:59]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6983602782/log.48329616._000118.job.log.tgz.1
[2026-01-27 01:46:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/68/log.48329616._000118.job.log.tgz.1
[2026-01-27 01:46:59]  workdir=None
[2026-01-27 01:46:59] ]
[2026-01-27 01:46:59] 2026-01-27 07:46:13,134 | INFO     | transferring file log.48329616._000118.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6983602782/log.48329616._000118.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 01:46:59] 2026-01-27 07:46:13,135 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6983602782/log.48329616._000118.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.483296
[2026-01-27 01:46:59] 2026-01-27 07:46:13,150 | INFO     | adding to output.list: log.48329616._000118.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/68/log.48329616._000118.job.log.tg
[2026-01-27 01:46:59] 2026-01-27 07:46:13,151 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 01:46:59] 2026-01-27 07:46:13,151 | INFO     | summary of transferred files:
[2026-01-27 01:46:59] 2026-01-27 07:46:13,151 | INFO     |  -- lfn=log.48329616._000118.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 01:46:59] 2026-01-27 07:46:13,151 | INFO     | stage-out finished correctly
[2026-01-27 01:46:59] 2026-01-27 07:46:14,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 01:46:59] 2026-01-27 07:46:14,907 | INFO     | monitor loop #413: job 0:6983602782 is in state 'finished'
[2026-01-27 01:46:59] 2026-01-27 07:46:14,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 01:46:59] 2026-01-27 07:46:14,915 | INFO     | time since job start (5672s) is within the limit (349056.0s)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,919 | INFO     | time since job start (5674s) is within the limit (349056.0s)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,922 | INFO     | job 6983602782 has state=finished
[2026-01-27 01:46:59] 2026-01-27 07:46:16,922 | INFO     | preparing for final server update for job 6983602782 in state='finished'
[2026-01-27 01:46:59] 2026-01-27 07:46:16,923 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-6983602782/jobReport.json
[2026-01-27 01:46:59] 2026-01-27 07:46:16,926 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-01-27 01:46:59] 2026-01-27 07:46:16,926 | INFO     | this job has now completed (state=finished)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,926 | INFO     | log transfer has been attempted: DONE
[2026-01-27 01:46:59] 2026-01-27 07:46:16,926 | INFO     | job 6983602782 has finished - writing final server update
[2026-01-27 01:46:59] 2026-01-27 07:46:16,927 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,938 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6983602782/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,938 | INFO     | extracted standard info from prmon json
[2026-01-27 01:46:59] 2026-01-27 07:46:16,939 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:46:59] 2026-01-27 07:46:16,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:46:59] 2026-01-27 07:46:16,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:46:59] 2026-01-27 07:46:16,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:46:59] 2026-01-27 07:46:16,941 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:46:59] 2026-01-27 07:46:16,942 | INFO     | sum of square deviations: 197203697.5
[2026-01-27 01:46:59] 2026-01-27 07:46:16,942 | INFO     | sum of deviations: 2010225323.5000002
[2026-01-27 01:46:59] 2026-01-27 07:46:16,942 | INFO     | mean x: 1769497221.5
[2026-01-27 01:46:59] 2026-01-27 07:46:16,942 | INFO     | mean y: 2686934.104651163
[2026-01-27 01:46:59] 2026-01-27 07:46:16,943 | INFO     | intersect: -18034947094.14266
[2026-01-27 01:46:59] 2026-01-27 07:46:16,943 | INFO     | chi2: 0.04462913436873134
[2026-01-27 01:46:59] 2026-01-27 07:46:16,943 | INFO     | current memory leak: 10.19 B/s (using 86 data points, chi2=0.04)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,943 | INFO     | could have reported an average CPU frequency of 2089 MHz (7 samples)
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | ..............................
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . Timing measurements:
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . get job = 0 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . initial setup = 8 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . payload setup = 5 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . stage-in = 0 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . payload execution = 5648 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . stage-out = 0 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,944 | INFO     | . log creation = 0 s
[2026-01-27 01:46:59] 2026-01-27 07:46:16,945 | INFO     | ..............................
[2026-01-27 01:46:59] 2026-01-27 07:46:17,049 | INFO     | 
[2026-01-27 01:46:59] 2026-01-27 07:46:17,050 | INFO     | job summary report
[2026-01-27 01:46:59] 2026-01-27 07:46:17,050 | INFO     | --------------------------------------------------
[2026-01-27 01:46:59] 2026-01-27 07:46:17,050 | INFO     | PanDA job id: 6983602782
[2026-01-27 01:46:59] 2026-01-27 07:46:17,051 | INFO     | task id: 48329616
[2026-01-27 01:46:59] 2026-01-27 07:46:17,051 | INFO     | errors: (none)
[2026-01-27 01:46:59] 2026-01-27 07:46:17,051 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:46:59] 2026-01-27 07:46:17,051 | INFO     | pilot state: finished 
[2026-01-27 01:46:59] 2026-01-27 07:46:17,052 | INFO     | transexitcode: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:17,052 | INFO     | exeerrorcode: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:17,052 | INFO     | exeerrordiag: 
[2026-01-27 01:46:59] 2026-01-27 07:46:17,052 | INFO     | exitcode: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:17,052 | INFO     | exitmsg: OK
[2026-01-27 01:46:59] 2026-01-27 07:46:17,053 | INFO     | cpuconsumptiontime: 62279 s
[2026-01-27 01:46:59] 2026-01-27 07:46:17,053 | INFO     | nevents: 400
[2026-01-27 01:46:59] 2026-01-27 07:46:17,053 | INFO     | neventsw: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:17,053 | INFO     | pid: 165042
[2026-01-27 01:46:59] 2026-01-27 07:46:17,053 | INFO     | pgrp: 165042
[2026-01-27 01:46:59] 2026-01-27 07:46:17,054 | INFO     | corecount: 12
[2026-01-27 01:46:59] 2026-01-27 07:46:17,054 | INFO     | event service: False
[2026-01-27 01:46:59] 2026-01-27 07:46:17,054 | INFO     | sizes: {0: 2284105, 1: 2284367, 11: 2284395, 5658: 2311033, 5659: 2320045, 5661: 2320101, 5663: 2320423}
[2026-01-27 01:46:59] 2026-01-27 07:46:17,054 | INFO     | --------------------------------------------------
[2026-01-27 01:46:59] 2026-01-27 07:46:17,054 | INFO     | 
[2026-01-27 01:46:59] 2026-01-27 07:46:17,055 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-27 01:46:59] 2026-01-27 07:46:17,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,089 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:46:59] 2026-01-27 07:46:17,090 | INFO     | job 6983602782 has completed (purged errors)
[2026-01-27 01:46:59] 2026-01-27 07:46:17,090 | INFO     | overall cleanup function is called
[2026-01-27 01:46:59] 2026-01-27 07:46:18,099 | INFO     | --- collectZombieJob: --- 10, [165042]
[2026-01-27 01:46:59] 2026-01-27 07:46:18,100 | INFO     | zombie collector waiting for pid 165042
[2026-01-27 01:46:59] 2026-01-27 07:46:18,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:46:59] 2026-01-27 07:46:18,100 | INFO     | collected zombie processes
[2026-01-27 01:46:59] 2026-01-27 07:46:18,100 | INFO     | will attempt to kill all subprocesses of pid=165042
[2026-01-27 01:46:59] 2026-01-27 07:46:18,832 | INFO     | process IDs to be killed: [165042] (in reverse order)
[2026-01-27 01:46:59] 2026-01-27 07:46:18,932 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:46:59] 2026-01-27 07:46:18,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:46:59] 2026-01-27 07:46:18,945 | INFO     | did not find any defunct processes belonging to 165042
[2026-01-27 01:46:59] 2026-01-27 07:46:18,955 | INFO     | did not find any defunct processes belonging to 165042
[2026-01-27 01:46:59] 2026-01-27 07:46:18,955 | INFO     | ready for new job
[2026-01-27 01:46:59] 2026-01-27 07:46:18,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:46:59] 2026-01-27 07:46:18,957 | INFO     | **************************************
[2026-01-27 01:46:59] 2026-01-27 07:46:18,957 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:46:59] 2026-01-27 07:46:18,957 | INFO     | **************************************
[2026-01-27 01:46:59] 2026-01-27 07:46:18,958 | INFO     | 
[2026-01-27 01:46:59] 2026-01-27 07:46:18,961 | INFO     | architecture information:
[2026-01-27 01:46:59] 2026-01-27 07:46:18,962 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:46:59] 2026-01-27 07:46:18,976 | INFO     | cat /etc/os-release:
[2026-01-27 01:46:59] NAME="CentOS Linux"
[2026-01-27 01:46:59] VERSION="7 (Core)"
[2026-01-27 01:46:59] ID="centos"
[2026-01-27 01:46:59] ID_LIKE="rhel fedora"
[2026-01-27 01:46:59] VERSION_ID="7"
[2026-01-27 01:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:46:59] ANSI_COLOR="0;31"
[2026-01-27 01:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:46:59] HOME_URL="https://www.centos.org/"
[2026-01-27 01:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:46:59] 
[2026-01-27 01:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:46:59] 
[2026-01-27 01:46:59] 2026-01-27 07:46:18,977 | INFO     | **************************************
[2026-01-27 01:46:59] 2026-01-27 07:46:19,480 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-27 01:46:59] 2026-01-27 07:46:19,499 | INFO     | sufficient remaining disk space (1779875971072 B)
[2026-01-27 01:46:59] 2026-01-27 07:46:19,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:46:59] 2026-01-27 07:46:19,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:46:59] 2026-01-27 07:46:19,500 | INFO     | update_server=False
[2026-01-27 01:46:59] 2026-01-27 07:46:19,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:46:59] 2026-01-27 07:46:19,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:46:59] 2026-01-27 07:46:19,913 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 01:46:59] 2026-01-27 07:46:19,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 01:46:59] 2026-01-27 07:46:19,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:46:59] 2026-01-27 07:46:19,914 | INFO     | will abort loop
[2026-01-27 01:46:59] 2026-01-27 07:46:19,923 | INFO     | all payload control threads have been joined
[2026-01-27 01:46:59] 2026-01-27 07:46:20,278 | INFO     | all data control threads have been joined
[2026-01-27 01:46:59] 2026-01-27 07:46:20,390 | INFO     | all job control threads have been joined
[2026-01-27 01:46:59] 2026-01-27 07:46:20,506 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:20,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:46:59] 2026-01-27 07:46:20,702 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:20,724 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:20,919 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:20,928 | INFO     | [payload] control thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:20,937 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,176 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,284 | INFO     | [data] control thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,288 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,395 | INFO     | [job] control thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,506 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,569 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:21,975 | INFO     | [job] validate thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:22,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:46:59] 2026-01-27 07:46:23,064 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:24,704 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:30,019 | INFO     | job.realtimelogging is not enabled
[2026-01-27 01:46:59] 2026-01-27 07:46:31,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:46:59] 2026-01-27 07:46:50,366 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:46:59] 2026-01-27 07:46:50,502 | INFO     | PID=160236 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 01:46:59] 2026-01-27 07:46:50,502 | INFO     | .. there are 3 such processes running
[2026-01-27 01:46:59] 2026-01-27 07:46:50,502 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:46:59] 2026-01-27 07:46:50,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:46:59] 2026-01-27 07:46:50,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:46:59] 2026-01-27 07:46:52,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126526499936064)>', '<ExcThread(monitor, started 126525953263360)>']
[2026-01-27 01:46:59] 2026-01-27 07:46:52,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:46:59] 2026-01-27 07:46:52,512 | INFO     | [monitor] control thread has ended
[2026-01-27 01:46:59] 2026-01-27 07:46:57,092 | INFO     | all workflow threads have been joined
[2026-01-27 01:46:59] 2026-01-27 07:46:57,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:46:59] 2026-01-27 07:46:57,093 | INFO     | traces error code: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:57,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:46:59] 2026-01-27 07:46:57,174 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:46:59] 2026-01-27 07:46:57,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:46:59] 2026-01-27 07:46:57,178 [wrapper] pilotpid: 160236
[2026-01-27 01:46:59] 2026-01-27 07:46:57,180 [wrapper] Pilot exit status: 0
[2026-01-27 01:46:59] 2026-01-27 07:46:57,188 [wrapper] pandaids: 6983602782
[2026-01-27 01:46:59] 2026-01-27 07:46:57,236 [wrapper] cleanup supervisor_pilot  226836 160237
[2026-01-27 01:46:59] 2026-01-27 07:46:57,239 [wrapper] Test setup, not cleaning
[2026-01-27 01:46:59] 2026-01-27 07:46:57,241 [wrapper] apfmon messages muted
[2026-01-27 01:46:59] 2026-01-27 07:46:57,244 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:46:59] 2026-01-27 07:46:57,246 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:46:59]  *** Error codes and diagnostics ***
[2026-01-27 01:46:59]     "exeErrorCode": 0,
[2026-01-27 01:46:59]     "exeErrorDiag": "",
[2026-01-27 01:46:59]     "pilotErrorCode": 0,
[2026-01-27 01:46:59]     "pilotErrorDiag": "",
[2026-01-27 01:46:59]  *** Listing of results directory ***
[2026-01-27 01:46:59] total 461848
[2026-01-27 01:46:59] -rw-r--r-- 1 mark mark    584422 Jan 25 19:12 pilot3.tar.gz
[2026-01-27 01:46:59] -rwx------ 1 mark mark     36322 Jan 25 19:12 runpilot2-wrapper.sh
[2026-01-27 01:46:59] -rw-r--r-- 1 mark mark      5111 Jan 25 19:14 queuedata.json
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark       100 Jan 27 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:46:59] -rwxr-xr-x 1 mark mark      7986 Jan 27 00:11 run_atlas
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark       105 Jan 27 00:11 job.xml
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark 275487865 Jan 27 00:11 EVNT.48329614._000005.pool.root.1
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark    597774 Jan 27 00:11 input.tar.gz
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark     15845 Jan 27 00:11 start_atlas.sh
[2026-01-27 01:46:59] drwxrwx--x 2 mark mark      4096 Jan 27 00:11 shared
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark      9265 Jan 27 00:11 init_data.xml
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark         0 Jan 27 00:11 boinc_setup_complete
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark         0 Jan 27 00:11 boinc_lockfile
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark      2608 Jan 27 00:11 pandaJob.out
[2026-01-27 01:46:59] -rw------- 1 mark mark   1004335 Jan 27 00:11 agis_schedconf.cvmfs.json
[2026-01-27 01:46:59] -rw------- 1 mark mark   1516246 Jan 27 00:11 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:46:59] -rw------- 1 mark mark       431 Jan 27 00:11 workernode_map.json
[2026-01-27 01:46:59] drwx------ 5 mark mark      4096 Jan 27 00:11 pilot3
[2026-01-27 01:46:59] -rw------- 1 mark mark 191047098 Jan 27 01:45 HITS.48329616._000118.pool.root.1
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark       530 Jan 27 01:45 boinc_task_state.xml
[2026-01-27 01:46:59] -rw------- 1 mark mark      1030 Jan 27 01:46 memory_monitor_summary.json
[2026-01-27 01:46:59] -rw------- 1 mark mark    405860 Jan 27 01:46 log.48329616._000118.job.log.tgz.1
[2026-01-27 01:46:59] -rw------- 1 mark mark      6332 Jan 27 01:46 heartbeat.json
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark      8192 Jan 27 01:46 boinc_mmap_file
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark        27 Jan 27 01:46 wrapper_checkpoint.txt
[2026-01-27 01:46:59] -rw------- 1 mark mark        95 Jan 27 01:46 pilot_heartbeat.json
[2026-01-27 01:46:59] -rw------- 1 mark mark      5085 Jan 27 01:46 pilotlog.txt
[2026-01-27 01:46:59] -rw------- 1 mark mark    820578 Jan 27 01:46 log.48329616._000118.job.log.1
[2026-01-27 01:46:59] -rw------- 1 mark mark       357 Jan 27 01:46 output.list
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark       620 Jan 27 01:46 runtime_log
[2026-01-27 01:46:59] -rw------- 1 mark mark   1239040 Jan 27 01:46 result.tar.gz
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark      8886 Jan 27 01:46 runtime_log.err
[2026-01-27 01:46:59] -rw------- 1 mark mark       645 Jan 27 01:46 dChKDmrKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEl8KDm3QrEem.diag
[2026-01-27 01:46:59] -rw-rw-r-- 1 mark mark     21522 Jan 27 01:46 stderr.txt
[2026-01-27 01:46:59] HITS file was successfully produced:
[2026-01-27 01:46:59] -rw------- 1 mark mark 191047098 Jan 27 01:45 shared/HITS.pool.root.1
[2026-01-27 01:46:59]  *** Contents of shared directory: ***
[2026-01-27 01:46:59] total 457424
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark 275487865 Jan 27 00:11 ATLAS.root_0
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark    597774 Jan 27 00:11 input.tar.gz
[2026-01-27 01:46:59] -rw-r--r-- 2 mark mark     15845 Jan 27 00:11 start_atlas.sh
[2026-01-27 01:46:59] -rw------- 1 mark mark 191047098 Jan 27 01:45 HITS.pool.root.1
[2026-01-27 01:46:59] -rw------- 1 mark mark   1239040 Jan 27 01:46 result.tar.gz
01:47:01 (156185): run_atlas exited; CPU time 62551.338952
01:47:01 (156185): called boinc_finish(0)

</stderr_txt>
]]>

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