Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:05:57 (104200): wrapper (7.7.26015): starting
14:05:57 (104200): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 14:05:57] Arguments: --nthreads 12
[2026-01-27 14:05:57] Threads: 12
[2026-01-27 14:05:57] Checking for CVMFS
[2026-01-27 14:05:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 14:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 14:05:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 14:05:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 14:05:58] 2.13.3.0 2862603 1200 49712 155586 1 188 3364165 4096001 0 130560 0 1122513 99.991 46034 2226 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 14:05:58] CVMFS is ok
[2026-01-27 14:05:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 14:05:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 14:05:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 14:05:58] Further information can be found at the LHC@home message board.
[2026-01-27 14:05:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 14:05:58] Checking for apptainer binary...
[2026-01-27 14:05:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 14:05:58] Running /usr/bin/apptainer --version
[2026-01-27 14:05:58] apptainer version 1.4.5
[2026-01-27 14:05:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 14:05:58] BoincUbuntu
[2026-01-27 14:05:58] apptainer works
[2026-01-27 14:05:58] Set ATHENA_PROC_NUMBER=12
[2026-01-27 14:05:58] Set ATHENA_CORE_NUMBER=12
[2026-01-27 14:05:58] Starting ATLAS job with PandaID=6977528744
[2026-01-27 14:05:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 14:54:31]  *** The last 200 lines of the pilot log: ***
[2026-01-27 14:54:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 14:54:31]  replicas=None
[2026-01-27 14:54:31]  scope=mc23_13p6TeV
[2026-01-27 14:54:31]  status=None
[2026-01-27 14:54:31]  status_code=0
[2026-01-27 14:54:31]  storage_token=
[2026-01-27 14:54:31]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/log.48298619._000124.job.log.tgz.1
[2026-01-27 14:54:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/a1/log.48298619._000124.job.log.tgz.1
[2026-01-27 14:54:31]  workdir=None
[2026-01-27 14:54:31] ]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,156 | INFO     | transferring file log.48298619._000124.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/log.48298619._000124.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 14:54:31] 2026-01-27 14:53:59,156 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/log.48298619._000124.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.482986
[2026-01-27 14:54:31] 2026-01-27 14:53:59,168 | INFO     | adding to output.list: log.48298619._000124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/a1/log.48298619._000124.job.log.tg
[2026-01-27 14:54:31] 2026-01-27 14:53:59,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 14:54:31] 2026-01-27 14:53:59,168 | INFO     | summary of transferred files:
[2026-01-27 14:54:31] 2026-01-27 14:53:59,168 | INFO     |  -- lfn=log.48298619._000124.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 14:54:31] 2026-01-27 14:53:59,168 | INFO     | stage-out finished correctly
[2026-01-27 14:54:31] 2026-01-27 14:53:59,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 14:54:31] 2026-01-27 14:53:59,249 | INFO     | job 6977528744 has state=finished
[2026-01-27 14:54:31] 2026-01-27 14:53:59,249 | INFO     | preparing for final server update for job 6977528744 in state='finished'
[2026-01-27 14:54:31] 2026-01-27 14:53:59,249 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/jobReport.json
[2026-01-27 14:54:31] 2026-01-27 14:53:59,250 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-01-27 14:54:31] 2026-01-27 14:53:59,251 | INFO     | this job has now completed (state=finished)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,251 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,251 | INFO     | log transfer has been attempted: DONE
[2026-01-27 14:54:31] 2026-01-27 14:53:59,251 | INFO     | job 6977528744 has finished - writing final server update
[2026-01-27 14:54:31] 2026-01-27 14:53:59,251 | INFO     | total number of processed events: 400 (read)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,252 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | INFO     | extracted standard info from prmon json
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 14:54:31] 2026-01-27 14:53:59,253 | INFO     | fitting pss+swap vs Time
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | sum of square deviations: 19832930.0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | sum of deviations: -3236740947.0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | mean x: 1769524279.5
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | mean y: 2812120.4
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | intersect: 288789778653.7525
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | chi2: 0.07015879619543927
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | current memory leak: -163.20 B/s (using 40 data points, chi2=0.07)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | could have reported an average CPU frequency of 4094 MHz (5 samples)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | ..............................
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . Timing measurements:
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . get job = 0 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . initial setup = 3 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . payload setup = 2 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . stage-in = 0 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . payload execution = 2853 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . stage-out = 0 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | . log creation = 0 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,254 | INFO     | ..............................
[2026-01-27 14:54:31] 2026-01-27 14:53:59,283 | INFO     | 
[2026-01-27 14:54:31] 2026-01-27 14:53:59,283 | INFO     | job summary report
[2026-01-27 14:54:31] 2026-01-27 14:53:59,283 | INFO     | --------------------------------------------------
[2026-01-27 14:54:31] 2026-01-27 14:53:59,283 | INFO     | PanDA job id: 6977528744
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | task id: 48298619
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | errors: (none)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | pilot state: finished 
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | transexitcode: 0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | exeerrorcode: 0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | exeerrordiag: 
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | exitcode: 0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | exitmsg: OK
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | cpuconsumptiontime: 32317 s
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | nevents: 400
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | neventsw: 0
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | pid: 113184
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | pgrp: 113184
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | corecount: 12
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | event service: False
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | sizes: {0: 2284360, 10: 2284360, 2860: 2318948}
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | --------------------------------------------------
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | 
[2026-01-27 14:54:31] 2026-01-27 14:53:59,284 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-27 14:54:31] 2026-01-27 14:53:59,299 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,299 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,299 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,299 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | job 6977528744 has completed (purged errors)
[2026-01-27 14:54:31] 2026-01-27 14:53:59,300 | INFO     | overall cleanup function is called
[2026-01-27 14:54:31] 2026-01-27 14:54:00,307 | INFO     | --- collectZombieJob: --- 10, [113184]
[2026-01-27 14:54:31] 2026-01-27 14:54:00,307 | INFO     | zombie collector waiting for pid 113184
[2026-01-27 14:54:31] 2026-01-27 14:54:00,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 14:54:31] 2026-01-27 14:54:00,307 | INFO     | collected zombie processes
[2026-01-27 14:54:31] 2026-01-27 14:54:00,307 | INFO     | will attempt to kill all subprocesses of pid=113184
[2026-01-27 14:54:31] 2026-01-27 14:54:00,367 | INFO     | process IDs to be killed: [113184] (in reverse order)
[2026-01-27 14:54:31] 2026-01-27 14:54:00,398 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 14:54:31] 2026-01-27 14:54:00,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 14:54:31] 2026-01-27 14:54:00,399 | INFO     | did not find any defunct processes belonging to 113184
[2026-01-27 14:54:31] 2026-01-27 14:54:00,401 | INFO     | did not find any defunct processes belonging to 113184
[2026-01-27 14:54:31] 2026-01-27 14:54:00,401 | INFO     | ready for new job
[2026-01-27 14:54:31] 2026-01-27 14:54:00,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | **************************************
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | **************************************
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | 
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | architecture information:
[2026-01-27 14:54:31] 2026-01-27 14:54:00,402 | INFO     | executing command: cat /etc/os-release
[2026-01-27 14:54:31] 2026-01-27 14:54:00,412 | INFO     | cat /etc/os-release:
[2026-01-27 14:54:31] NAME="CentOS Linux"
[2026-01-27 14:54:31] VERSION="7 (Core)"
[2026-01-27 14:54:31] ID="centos"
[2026-01-27 14:54:31] ID_LIKE="rhel fedora"
[2026-01-27 14:54:31] VERSION_ID="7"
[2026-01-27 14:54:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 14:54:31] ANSI_COLOR="0;31"
[2026-01-27 14:54:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 14:54:31] HOME_URL="https://www.centos.org/"
[2026-01-27 14:54:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 14:54:31] 
[2026-01-27 14:54:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 14:54:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 14:54:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 14:54:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 14:54:31] 
[2026-01-27 14:54:31] 2026-01-27 14:54:00,412 | INFO     | **************************************
[2026-01-27 14:54:31] 2026-01-27 14:54:00,915 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | INFO     | sufficient remaining disk space (286059921408 B)
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | INFO     | update_server=False
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 14:54:31] 2026-01-27 14:54:00,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 14:54:31] 2026-01-27 14:54:00,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:54:31] 2026-01-27 14:54:01,191 | INFO     | all data control threads have been joined
[2026-01-27 14:54:31] 2026-01-27 14:54:01,340 | INFO     | all payload control threads have been joined
[2026-01-27 14:54:31] 2026-01-27 14:54:01,933 | INFO     | [job] retrieve thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:01,933 | INFO     | [job] queue monitor thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,196 | INFO     | [data] control thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 14:54:31] 2026-01-27 14:54:02,252 | INFO     | all job control threads have been joined
[2026-01-27 14:54:31] 2026-01-27 14:54:02,346 | INFO     | [payload] control thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,515 | INFO     | [payload] failed_post thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,587 | INFO     | [job] validate thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,790 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,830 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,839 | INFO     | [data] copytool_in thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:02,878 | WARNING  | process 113184 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/payload.stdout) since it has not been created yet
[2026-01-27 14:54:31] 2026-01-27 14:54:02,916 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-27 14:54:31] 2026-01-27 14:54:02,927 | INFO     | sufficient remaining disk space (286059921408 B)
[2026-01-27 14:54:31] 2026-01-27 14:54:02,927 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 14:54:31] 2026-01-27 14:54:02,927 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/2/PanDA_Pilot-6977528744/HITS.48298619._000124.pool.root.1 since it does not exist
[2026-01-27 14:54:31] 2026-01-27 14:54:02,986 | INFO     | number of running child processes to parent process 113184: 1
[2026-01-27 14:54:31] 2026-01-27 14:54:02,986 | INFO     | maximum number of monitored processes: 6
[2026-01-27 14:54:31] 2026-01-27 14:54:02,986 | INFO     | aborting job monitoring since job object (job id=6977528744) has expired
[2026-01-27 14:54:31] 2026-01-27 14:54:02,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:54:31] 2026-01-27 14:54:02,987 | INFO     | will abort loop
[2026-01-27 14:54:31] 2026-01-27 14:54:02,995 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:03,091 | INFO     | [payload] validate_post thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:03,257 | INFO     | [job] control thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:03,992 | INFO     | [job] job monitor thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:04,208 | INFO     | [data] copytool_out thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:04,934 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:11,355 | INFO     | job.realtimelogging is not enabled
[2026-01-27 14:54:31] 2026-01-27 14:54:12,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 14:54:31] 2026-01-27 14:54:13,052 | INFO     | [monitor] cgroup control has ended
[2026-01-27 14:54:31] 2026-01-27 14:54:13,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130402005362496)>', '<ExcThread(monitor, started 130401372727040)>']
[2026-01-27 14:54:31] 2026-01-27 14:54:18,629 | INFO     | all workflow threads have been joined
[2026-01-27 14:54:31] 2026-01-27 14:54:18,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 14:54:31] 2026-01-27 14:54:18,629 | INFO     | traces error code: 0
[2026-01-27 14:54:31] 2026-01-27 14:54:18,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | INFO     | PID=108446 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 14:54:31] 2026-01-27 14:54:31,149 | INFO     | [monitor] control thread has ended
[2026-01-27 14:54:31] 2026-01-27 14:54:31,197 [wrapper] ==== pilot stdout END ====
[2026-01-27 14:54:31] 2026-01-27 14:54:31,199 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 14:54:31] 2026-01-27 14:54:31,200 [wrapper] pilotpid: 108446
[2026-01-27 14:54:31] 2026-01-27 14:54:31,201 [wrapper] Pilot exit status: 0
[2026-01-27 14:54:31] 2026-01-27 14:54:31,207 [wrapper] pandaids: 6977528744
[2026-01-27 14:54:31] 2026-01-27 14:54:31,228 [wrapper] cleanup supervisor_pilot  156702 108447
[2026-01-27 14:54:31] 2026-01-27 14:54:31,229 [wrapper] Test setup, not cleaning
[2026-01-27 14:54:31] 2026-01-27 14:54:31,231 [wrapper] apfmon messages muted
[2026-01-27 14:54:31] 2026-01-27 14:54:31,232 [wrapper] ==== wrapper stdout END ====
[2026-01-27 14:54:31] 2026-01-27 14:54:31,234 [wrapper] ==== wrapper stderr END ====
[2026-01-27 14:54:31]  *** Error codes and diagnostics ***
[2026-01-27 14:54:31]     "exeErrorCode": 0,
[2026-01-27 14:54:31]     "exeErrorDiag": "",
[2026-01-27 14:54:31]     "pilotErrorCode": 0,
[2026-01-27 14:54:31]     "pilotErrorDiag": "",
[2026-01-27 14:54:31]  *** Listing of results directory ***
[2026-01-27 14:54:31] total 418116
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc    584422 Jan 22 10:24 pilot3.tar.gz
[2026-01-27 14:54:31] -rwx------ 1 boinc boinc     36322 Jan 22 10:25 runpilot2-wrapper.sh
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc      5111 Jan 22 10:25 queuedata.json
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc       100 Jan 27 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 14:54:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 14:05 run_atlas
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc       105 Jan 27 14:05 job.xml
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc 253270724 Jan 27 14:05 EVNT.48298617._000005.pool.root.1
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc      9654 Jan 27 14:05 init_data.xml
[2026-01-27 14:54:31] drwxrwx--x 2 boinc boinc      4096 Jan 27 14:05 shared
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc    597761 Jan 27 14:05 input.tar.gz
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:05 start_atlas.sh
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:05 boinc_lockfile
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc      2603 Jan 27 14:05 pandaJob.out
[2026-01-27 14:54:31] -rw------- 1 boinc boinc   1004835 Jan 27 14:06 agis_schedconf.cvmfs.json
[2026-01-27 14:54:31] -rw------- 1 boinc boinc   1516246 Jan 27 14:06 agis_ddmendpoints.agis.ALL.json
[2026-01-27 14:54:31] -rw------- 1 boinc boinc       423 Jan 27 14:06 workernode_map.json
[2026-01-27 14:54:31] drwx------ 5 boinc boinc      4096 Jan 27 14:06 pilot3
[2026-01-27 14:54:31] -rw------- 1 boinc boinc        95 Jan 27 14:53 pilot_heartbeat.json
[2026-01-27 14:54:31] -rw------- 1 boinc boinc 169306123 Jan 27 14:53 HITS.48298619._000124.pool.root.1
[2026-01-27 14:54:31] -rw------- 1 boinc boinc      1013 Jan 27 14:53 memory_monitor_summary.json
[2026-01-27 14:54:31] -rw------- 1 boinc boinc    373765 Jan 27 14:53 log.48298619._000124.job.log.tgz.1
[2026-01-27 14:54:31] -rw------- 1 boinc boinc      6280 Jan 27 14:53 heartbeat.json
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc        27 Jan 27 14:54 wrapper_checkpoint.txt
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc      8192 Jan 27 14:54 boinc_mmap_file
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc       529 Jan 27 14:54 boinc_task_state.xml
[2026-01-27 14:54:31] -rw------- 1 boinc boinc       746 Jan 27 14:54 pilotlog.txt
[2026-01-27 14:54:31] -rw------- 1 boinc boinc    442555 Jan 27 14:54 log.48298619._000124.job.log.1
[2026-01-27 14:54:31] -rw------- 1 boinc boinc       357 Jan 27 14:54 output.list
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc       620 Jan 27 14:54 runtime_log
[2026-01-27 14:54:31] -rw------- 1 boinc boinc    829440 Jan 27 14:54 result.tar.gz
[2026-01-27 14:54:31] -rw------- 1 boinc boinc       649 Jan 27 14:54 WmJNDmN3628n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYgtKDm7BCyMm.diag
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc      8910 Jan 27 14:54 runtime_log.err
[2026-01-27 14:54:31] -rw-r--r-- 1 boinc boinc     22123 Jan 27 14:54 stderr.txt
[2026-01-27 14:54:31] HITS file was successfully produced:
[2026-01-27 14:54:31] -rw------- 1 boinc boinc 169306123 Jan 27 14:53 shared/HITS.pool.root.1
[2026-01-27 14:54:31]  *** Contents of shared directory: ***
[2026-01-27 14:54:31] total 414096
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc 253270724 Jan 27 14:05 ATLAS.root_0
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc    597761 Jan 27 14:05 input.tar.gz
[2026-01-27 14:54:31] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:05 start_atlas.sh
[2026-01-27 14:54:31] -rw------- 1 boinc boinc 169306123 Jan 27 14:53 HITS.pool.root.1
[2026-01-27 14:54:31] -rw------- 1 boinc boinc    829440 Jan 27 14:54 result.tar.gz
14:54:33 (104200): run_atlas exited; CPU time 32325.370869
14:54:33 (104200): called boinc_finish(0)

</stderr_txt>
]]>

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