Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
12:48:11 (2456744): wrapper (7.7.26015): starting
12:48:11 (2456744): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 12:48:11] Arguments: --nthreads 12
[2026-01-27 12:48:11] Threads: 12
[2026-01-27 12:48:11] Checking for CVMFS
[2026-01-27 12:48:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 12:48:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 12:48:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 12:48:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 12:48:15] 2.12.7.0 2755337 5740 81296 155594 0 50 2258352 4194304 93 130560 0 7755075 99.994 205090 558 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-27 12:48:15] CVMFS is ok
[2026-01-27 12:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 12:48:15] Checking for apptainer binary...
[2026-01-27 12:48:15] apptainer is not installed, using version from CVMFS
[2026-01-27 12:48:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 12:48:15] Trebeth
[2026-01-27 12:48:15] apptainer works
[2026-01-27 12:48:15] Set ATHENA_PROC_NUMBER=12
[2026-01-27 12:48:15] Set ATHENA_CORE_NUMBER=12
[2026-01-27 12:48:15] Starting ATLAS job with PandaID=6983344866
[2026-01-27 12:48:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:57:45]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:57:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 13:57:45]  is_altstaged=None
[2026-01-27 13:57:45]  is_tar=False
[2026-01-27 13:57:45]  lfn=log.48317872._001114.job.log.tgz.1
[2026-01-27 13:57:45]  mtime=0
[2026-01-27 13:57:45]  protocol_id=None
[2026-01-27 13:57:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 13:57:45]  replicas=None
[2026-01-27 13:57:45]  scope=mc23_13p6TeV
[2026-01-27 13:57:45]  status=None
[2026-01-27 13:57:45]  status_code=0
[2026-01-27 13:57:45]  storage_token=
[2026-01-27 13:57:45]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/log.48317872._001114.job.log.tgz.1
[2026-01-27 13:57:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/af/log.48317872._001114.job.log.tgz.1
[2026-01-27 13:57:45]  workdir=None
[2026-01-27 13:57:45] ]
[2026-01-27 13:57:45] 2026-01-27 18:57:02,853 | INFO     | transferring file log.48317872._001114.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/log.48317872._001114.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 13:57:45] 2026-01-27 18:57:02,853 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/log.48317872._001114.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.483178
[2026-01-27 13:57:45] 2026-01-27 18:57:02,868 | INFO     | adding to output.list: log.48317872._001114.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/af/log.48317872._001114.job.log.tg
[2026-01-27 13:57:45] 2026-01-27 18:57:02,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 13:57:45] 2026-01-27 18:57:02,869 | INFO     | summary of transferred files:
[2026-01-27 13:57:45] 2026-01-27 18:57:02,869 | INFO     |  -- lfn=log.48317872._001114.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 13:57:45] 2026-01-27 18:57:02,869 | INFO     | stage-out finished correctly
[2026-01-27 13:57:45] 2026-01-27 18:57:03,008 | INFO     | time since job start (4111s) is within the limit (349056.0s)
[2026-01-27 13:57:45] 2026-01-27 18:57:05,012 | INFO     | time since job start (4113s) is within the limit (349056.0s)
[2026-01-27 13:57:45] 2026-01-27 18:57:05,156 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 13:57:45] 2026-01-27 18:57:06,518 | WARNING  | process 2466194 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 13:57:45] 2026-01-27 18:57:06,518 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:57:45] 2026-01-27 18:57:06,751 | INFO     | number of running child processes to parent process 2466194: 1
[2026-01-27 13:57:45] 2026-01-27 18:57:06,752 | INFO     | maximum number of monitored processes: 6
[2026-01-27 13:57:45] 2026-01-27 18:57:07,016 | INFO     | time since job start (4115s) is within the limit (349056.0s)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,519 | INFO     | job 6983344866 has state=finished
[2026-01-27 13:57:45] 2026-01-27 18:57:07,519 | INFO     | preparing for final server update for job 6983344866 in state='finished'
[2026-01-27 13:57:45] 2026-01-27 18:57:07,519 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/jobReport.json
[2026-01-27 13:57:45] 2026-01-27 18:57:07,521 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-01-27 13:57:45] 2026-01-27 18:57:07,522 | INFO     | this job has now completed (state=finished)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,522 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,522 | INFO     | log transfer has been attempted: DONE
[2026-01-27 13:57:45] 2026-01-27 18:57:07,522 | INFO     | job 6983344866 has finished - writing final server update
[2026-01-27 13:57:45] 2026-01-27 18:57:07,522 | INFO     | total number of processed events: 400 (read)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,548 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983344866/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,549 | INFO     | extracted standard info from prmon json
[2026-01-27 13:57:45] 2026-01-27 18:57:07,549 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:57:45] 2026-01-27 18:57:07,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:57:45] 2026-01-27 18:57:07,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:57:45] 2026-01-27 18:57:07,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:57:45] 2026-01-27 18:57:07,551 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:57:45] 2026-01-27 18:57:07,551 | INFO     | sum of square deviations: 66959395.0
[2026-01-27 13:57:45] 2026-01-27 18:57:07,551 | INFO     | sum of deviations: -2066440239.4999998
[2026-01-27 13:57:45] 2026-01-27 18:57:07,551 | INFO     | mean x: 1769538235.5
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | mean y: 2729300.5166666666
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | intersect: 54612616608.653595
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | chi2: 0.08854700356151343
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | current memory leak: -30.86 B/s (using 60 data points, chi2=0.09)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | could have reported an average CPU frequency of 2831 MHz (6 samples)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,552 | INFO     | ..............................
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . Timing measurements:
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . get job = 0 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . initial setup = 8 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . payload setup = 4 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . stage-in = 0 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . payload execution = 4089 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . stage-out = 0 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | . log creation = 0 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,553 | INFO     | ..............................
[2026-01-27 13:57:45] 2026-01-27 18:57:07,615 | INFO     | 
[2026-01-27 13:57:45] 2026-01-27 18:57:07,615 | INFO     | job summary report
[2026-01-27 13:57:45] 2026-01-27 18:57:07,615 | INFO     | --------------------------------------------------
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | PanDA job id: 6983344866
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | task id: 48317872
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | errors: (none)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | pilot state: finished 
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | transexitcode: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | exeerrorcode: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | exeerrordiag: 
[2026-01-27 13:57:45] 2026-01-27 18:57:07,616 | INFO     | exitcode: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | exitmsg: OK
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | cpuconsumptiontime: 43151 s
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | nevents: 400
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | neventsw: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | pid: 2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | pgrp: 2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | corecount: 12
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | event service: False
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | sizes: {0: 2284237, 11: 2284237, 4096: 2310166, 4097: 2310165, 4099: 2319233, 4101: 2319289, 4104: 2319611}
[2026-01-27 13:57:45] 2026-01-27 18:57:07,617 | INFO     | --------------------------------------------------
[2026-01-27 13:57:45] 2026-01-27 18:57:07,618 | INFO     | 
[2026-01-27 13:57:45] 2026-01-27 18:57:07,618 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | job 6983344866 has completed (purged errors)
[2026-01-27 13:57:45] 2026-01-27 18:57:07,637 | INFO     | overall cleanup function is called
[2026-01-27 13:57:45] 2026-01-27 18:57:08,643 | INFO     | --- collectZombieJob: --- 10, [2466194]
[2026-01-27 13:57:45] 2026-01-27 18:57:08,644 | INFO     | zombie collector waiting for pid 2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:08,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:57:45] 2026-01-27 18:57:08,644 | INFO     | collected zombie processes
[2026-01-27 13:57:45] 2026-01-27 18:57:08,644 | INFO     | will attempt to kill all subprocesses of pid=2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:08,840 | INFO     | process IDs to be killed: [2466194] (in reverse order)
[2026-01-27 13:57:45] 2026-01-27 18:57:08,894 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:57:45] 2026-01-27 18:57:08,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:57:45] 2026-01-27 18:57:08,900 | INFO     | did not find any defunct processes belonging to 2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:08,904 | INFO     | did not find any defunct processes belonging to 2466194
[2026-01-27 13:57:45] 2026-01-27 18:57:08,904 | INFO     | ready for new job
[2026-01-27 13:57:45] 2026-01-27 18:57:08,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:57:45] 2026-01-27 18:57:08,906 | INFO     | **************************************
[2026-01-27 13:57:45] 2026-01-27 18:57:08,906 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:57:45] 2026-01-27 18:57:08,906 | INFO     | **************************************
[2026-01-27 13:57:45] 2026-01-27 18:57:08,906 | INFO     | 
[2026-01-27 13:57:45] 2026-01-27 18:57:08,926 | INFO     | architecture information:
[2026-01-27 13:57:45] 2026-01-27 18:57:08,927 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:57:45] 2026-01-27 18:57:08,938 | INFO     | cat /etc/os-release:
[2026-01-27 13:57:45] NAME="CentOS Linux"
[2026-01-27 13:57:45] VERSION="7 (Core)"
[2026-01-27 13:57:45] ID="centos"
[2026-01-27 13:57:45] ID_LIKE="rhel fedora"
[2026-01-27 13:57:45] VERSION_ID="7"
[2026-01-27 13:57:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:57:45] ANSI_COLOR="0;31"
[2026-01-27 13:57:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:57:45] HOME_URL="https://www.centos.org/"
[2026-01-27 13:57:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:57:45] 
[2026-01-27 13:57:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:57:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:57:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:57:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:57:45] 
[2026-01-27 13:57:45] 2026-01-27 18:57:08,938 | INFO     | **************************************
[2026-01-27 13:57:45] 2026-01-27 18:57:09,440 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-27 13:57:45] 2026-01-27 18:57:09,454 | INFO     | sufficient remaining disk space (383155961856 B)
[2026-01-27 13:57:45] 2026-01-27 18:57:09,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:57:45] 2026-01-27 18:57:09,455 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:57:45] 2026-01-27 18:57:09,455 | INFO     | update_server=False
[2026-01-27 13:57:45] 2026-01-27 18:57:09,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:57:45] 2026-01-27 18:57:09,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:57:45] 2026-01-27 18:57:09,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:57:45] 2026-01-27 18:57:09,647 | INFO     | all data control threads have been joined
[2026-01-27 13:57:45] 2026-01-27 18:57:09,871 | INFO     | all payload control threads have been joined
[2026-01-27 13:57:45] 2026-01-27 18:57:10,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:57:45] 2026-01-27 18:57:10,260 | INFO     | aborting loop
[2026-01-27 13:57:45] 2026-01-27 18:57:10,461 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,461 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,561 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,651 | INFO     | [data] control thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,782 | INFO     | all job control threads have been joined
[2026-01-27 13:57:45] 2026-01-27 18:57:10,803 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,875 | INFO     | [payload] control thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:10,992 | INFO     | [job] validate thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:57:45] 2026-01-27 18:57:11,251 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,265 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,303 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,345 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,461 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,643 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,784 | INFO     | [job] control thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:11,951 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:15,255 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:57:45] 2026-01-27 18:57:39,035 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:57:45] 2026-01-27 18:57:40,313 | INFO     | PID=2461136 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 13:57:45] 2026-01-27 18:57:40,313 | INFO     | .. there are 2 such processes running
[2026-01-27 13:57:45] 2026-01-27 18:57:40,314 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:57:45] 2026-01-27 18:57:40,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:57:45] 2026-01-27 18:57:40,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:57:45] 2026-01-27 18:57:40,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435699570496)>', '<ExcThread(monitor, started 140435255174912)>']
[2026-01-27 13:57:45] 2026-01-27 18:57:41,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:57:45] 2026-01-27 18:57:41,319 | INFO     | [monitor] control thread has ended
[2026-01-27 13:57:45] 2026-01-27 18:57:45,705 | INFO     | all workflow threads have been joined
[2026-01-27 13:57:45] 2026-01-27 18:57:45,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:57:45] 2026-01-27 18:57:45,705 | INFO     | traces error code: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:45,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:57:45] 2026-01-27 18:57:45,814 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:57:45] 2026-01-27 18:57:45,816 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:57:45] 2026-01-27 18:57:45,818 [wrapper] pilotpid: 2461136
[2026-01-27 13:57:45] 2026-01-27 18:57:45,820 [wrapper] Pilot exit status: 0
[2026-01-27 13:57:45] 2026-01-27 18:57:45,826 [wrapper] pandaids: 6983344866
[2026-01-27 13:57:45] 2026-01-27 18:57:45,854 [wrapper] cleanup supervisor_pilot 2495770 2461137
[2026-01-27 13:57:45] 2026-01-27 18:57:45,855 [wrapper] Test setup, not cleaning
[2026-01-27 13:57:45] 2026-01-27 18:57:45,857 [wrapper] apfmon messages muted
[2026-01-27 13:57:45] 2026-01-27 18:57:45,859 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:57:45] 2026-01-27 18:57:45,861 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:57:45]  *** Error codes and diagnostics ***
[2026-01-27 13:57:45]     "exeErrorCode": 0,
[2026-01-27 13:57:45]     "exeErrorDiag": "",
[2026-01-27 13:57:45]     "pilotErrorCode": 0,
[2026-01-27 13:57:45]     "pilotErrorDiag": "",
[2026-01-27 13:57:45]  *** Listing of results directory ***
[2026-01-27 13:57:45] total 680056
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-27 13:57:45] -rwx------ 1 boinc boinc     36322 Jan 25 15:51 runpilot2-wrapper.sh
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc      5111 Jan 25 15:54 queuedata.json
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc       100 Jan 27 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:57:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 12:48 run_atlas
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc       105 Jan 27 12:48 job.xml
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc      7579 Jan 27 12:48 init_data.xml
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc 502733713 Jan 27 12:48 EVNT.48317869._000023.pool.root.1
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc     15845 Jan 27 12:48 start_atlas.sh
[2026-01-27 13:57:45] drwxrwx--x 2 boinc boinc      4096 Jan 27 12:48 shared
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc    597748 Jan 27 12:48 input.tar.gz
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc         0 Jan 27 12:48 boinc_lockfile
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc      2513 Jan 27 12:48 pandaJob.out
[2026-01-27 13:57:45] -rw------- 1 boinc boinc        50 Jan 27 12:48 setup.sh.local
[2026-01-27 13:57:45] -rw------- 1 boinc boinc   1005228 Jan 27 12:48 agis_schedconf.cvmfs.json
[2026-01-27 13:57:45] -rw------- 1 boinc boinc   1516246 Jan 27 12:48 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:57:45] -rw------- 1 boinc boinc       430 Jan 27 12:48 workernode_map.json
[2026-01-27 13:57:45] drwx------ 5 boinc boinc      4096 Jan 27 12:48 pilot3
[2026-01-27 13:57:45] -rw------- 1 boinc boinc 187708552 Jan 27 13:56 HITS.48317872._001114.pool.root.1
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc       530 Jan 27 13:56 boinc_task_state.xml
[2026-01-27 13:57:45] -rw------- 1 boinc boinc      1022 Jan 27 13:56 memory_monitor_summary.json
[2026-01-27 13:57:45] -rw------- 1 boinc boinc    371591 Jan 27 13:57 log.48317872._001114.job.log.tgz.1
[2026-01-27 13:57:45] -rw------- 1 boinc boinc      6326 Jan 27 13:57 heartbeat.json
[2026-01-27 13:57:45] -rw------- 1 boinc boinc        95 Jan 27 13:57 pilot_heartbeat.json
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc      8192 Jan 27 13:57 boinc_mmap_file
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc        27 Jan 27 13:57 wrapper_checkpoint.txt
[2026-01-27 13:57:45] -rw------- 1 boinc boinc      4827 Jan 27 13:57 pilotlog.txt
[2026-01-27 13:57:45] -rw------- 1 boinc boinc    620318 Jan 27 13:57 log.48317872._001114.job.log.1
[2026-01-27 13:57:45] -rw------- 1 boinc boinc       357 Jan 27 13:57 output.list
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc       620 Jan 27 13:57 runtime_log
[2026-01-27 13:57:45] -rw------- 1 boinc boinc   1013760 Jan 27 13:57 result.tar.gz
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc      9403 Jan 27 13:57 runtime_log.err
[2026-01-27 13:57:45] -rw------- 1 boinc boinc       650 Jan 27 13:57 QLPKDmcGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5q1KDmNXT8Ln.diag
[2026-01-27 13:57:45] -rw-r--r-- 1 boinc boinc     21229 Jan 27 13:57 stderr.txt
[2026-01-27 13:57:45] HITS file was successfully produced:
[2026-01-27 13:57:45] -rw------- 1 boinc boinc 187708552 Jan 27 13:56 shared/HITS.pool.root.1
[2026-01-27 13:57:45]  *** Contents of shared directory: ***
[2026-01-27 13:57:45] total 675864
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc 502733713 Jan 27 12:48 ATLAS.root_0
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc     15845 Jan 27 12:48 start_atlas.sh
[2026-01-27 13:57:45] -rw-r--r-- 2 boinc boinc    597748 Jan 27 12:48 input.tar.gz
[2026-01-27 13:57:45] -rw------- 1 boinc boinc 187708552 Jan 27 13:56 HITS.pool.root.1
[2026-01-27 13:57:45] -rw------- 1 boinc boinc   1013760 Jan 27 13:57 result.tar.gz
13:57:47 (2456744): run_atlas exited; CPU time 43212.675399
13:57:47 (2456744): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN