Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:56:55 (306712): wrapper (7.7.26015): starting
16:56:55 (306712): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 16:56:55] Arguments: --nthreads 12
[2026-01-27 16:56:55] Threads: 12
[2026-01-27 16:56:55] Checking for CVMFS
[2026-01-27 16:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 16:56:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 16:56:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 16:56:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 16:56:56] 2.13.3.0 2862603 1371 49412 155592 3 49 3397864 4096000 0 130560 0 1282835 99.991 55075 2325 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 16:56:56] CVMFS is ok
[2026-01-27 16:56:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 16:56:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 16:56:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 16:56:56] Further information can be found at the LHC@home message board.
[2026-01-27 16:56:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 16:56:56] Checking for apptainer binary...
[2026-01-27 16:56:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 16:56:56] Running /usr/bin/apptainer --version
[2026-01-27 16:56:56] apptainer version 1.4.5
[2026-01-27 16:56:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 16:56:56] BoincUbuntu
[2026-01-27 16:56:56] apptainer works
[2026-01-27 16:56:56] Set ATHENA_PROC_NUMBER=12
[2026-01-27 16:56:56] Set ATHENA_CORE_NUMBER=12
[2026-01-27 16:56:56] Starting ATLAS job with PandaID=6983060978
[2026-01-27 16:56:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 17:37:16]  *** The last 200 lines of the pilot log: ***
[2026-01-27 17:37:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 17:37:16]  is_altstaged=None
[2026-01-27 17:37:16]  is_tar=False
[2026-01-27 17:37:16]  lfn=log.48310724._009247.job.log.tgz.1
[2026-01-27 17:37:16]  mtime=0
[2026-01-27 17:37:16]  protocol_id=None
[2026-01-27 17:37:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 17:37:16]  replicas=None
[2026-01-27 17:37:16]  scope=mc23_13p6TeV
[2026-01-27 17:37:16]  status=None
[2026-01-27 17:37:16]  status_code=0
[2026-01-27 17:37:16]  storage_token=
[2026-01-27 17:37:16]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/log.48310724._009247.job.log.tgz.1
[2026-01-27 17:37:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/cc/log.48310724._009247.job.log.tgz.1
[2026-01-27 17:37:16]  workdir=None
[2026-01-27 17:37:16] ]
[2026-01-27 17:37:16] 2026-01-27 17:36:17,297 | INFO     | transferring file log.48310724._009247.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/log.48310724._009247.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 17:37:16] 2026-01-27 17:36:17,297 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/log.48310724._009247.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.483107
[2026-01-27 17:37:16] 2026-01-27 17:36:17,308 | INFO     | adding to output.list: log.48310724._009247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/cc/log.48310724._009247.job.log.tg
[2026-01-27 17:37:16] 2026-01-27 17:36:17,308 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 17:37:16] 2026-01-27 17:36:17,308 | INFO     | summary of transferred files:
[2026-01-27 17:37:16] 2026-01-27 17:36:17,308 | INFO     |  -- lfn=log.48310724._009247.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 17:37:16] 2026-01-27 17:36:17,308 | INFO     | stage-out finished correctly
[2026-01-27 17:37:16] 2026-01-27 17:36:18,292 | WARNING  | process 315686 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 17:37:16] 2026-01-27 17:36:18,292 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 17:37:16] 2026-01-27 17:36:18,350 | INFO     | number of running child processes to parent process 315686: 1
[2026-01-27 17:37:16] 2026-01-27 17:36:18,350 | INFO     | maximum number of monitored processes: 6
[2026-01-27 17:37:16] 2026-01-27 17:36:18,410 | INFO     | time since job start (2352s) is within the limit (349056.0s)
[2026-01-27 17:37:16] 2026-01-27 17:36:18,528 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 17:37:16] 2026-01-27 17:36:19,449 | INFO     | job 6983060978 has state=finished
[2026-01-27 17:37:16] 2026-01-27 17:36:19,450 | INFO     | preparing for final server update for job 6983060978 in state='finished'
[2026-01-27 17:37:16] 2026-01-27 17:36:19,495 | INFO     | PID=310937 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 17:37:16] 2026-01-27 17:36:19,869 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,870 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/jobReport.json
[2026-01-27 17:37:16] 2026-01-27 17:36:19,870 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-01-27 17:37:16] 2026-01-27 17:36:19,870 | INFO     | this job has now completed (state=finished)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,870 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,871 | INFO     | log transfer has been attempted: DONE
[2026-01-27 17:37:16] 2026-01-27 17:36:19,871 | INFO     | job 6983060978 has finished - writing final server update
[2026-01-27 17:37:16] 2026-01-27 17:36:19,871 | INFO     | total number of processed events: 400 (read)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983060978/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | INFO     | extracted standard info from prmon json
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 17:37:16] 2026-01-27 17:36:19,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | fitting pss+swap vs Time
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | sum of square deviations: 10150888.0
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | sum of deviations: -1818570582.5
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | mean x: 1769534292.5
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | mean y: 2790133.34375
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | intersect: 317021656765.05615
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | chi2: 0.05293334367743443
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | current memory leak: -179.15 B/s (using 32 data points, chi2=0.05)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | could have reported an average CPU frequency of 4093 MHz (5 samples)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | ..............................
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . Timing measurements:
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . get job = 0 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . initial setup = 3 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . payload setup = 2 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . stage-in = 0 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . payload execution = 2332 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . stage-out = 0 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | . log creation = 0 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,873 | INFO     | ..............................
[2026-01-27 17:37:16] 2026-01-27 17:36:19,902 | INFO     | 
[2026-01-27 17:37:16] 2026-01-27 17:36:19,902 | INFO     | job summary report
[2026-01-27 17:37:16] 2026-01-27 17:36:19,902 | INFO     | --------------------------------------------------
[2026-01-27 17:37:16] 2026-01-27 17:36:19,902 | INFO     | PanDA job id: 6983060978
[2026-01-27 17:37:16] 2026-01-27 17:36:19,902 | INFO     | task id: 48310724
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | errors: (none)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | pilot state: finished 
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | transexitcode: 0
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | exeerrorcode: 0
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | exeerrordiag: 
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | exitcode: 0
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | exitmsg: OK
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | cpuconsumptiontime: 26022 s
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | nevents: 400
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | neventsw: 0
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | pid: 315686
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | pgrp: 315686
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | corecount: 12
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | event service: False
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | sizes: {0: 2284260, 11: 2284260, 2338: 2309375, 2340: 2318387, 2341: 2318443, 2343: 2318669}
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | --------------------------------------------------
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | 
[2026-01-27 17:37:16] 2026-01-27 17:36:19,903 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-27 17:37:16] 2026-01-27 17:36:19,918 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | job 6983060978 has completed (purged errors)
[2026-01-27 17:37:16] 2026-01-27 17:36:19,919 | INFO     | overall cleanup function is called
[2026-01-27 17:37:16] 2026-01-27 17:36:20,926 | INFO     | --- collectZombieJob: --- 10, [315686]
[2026-01-27 17:37:16] 2026-01-27 17:36:20,926 | INFO     | zombie collector waiting for pid 315686
[2026-01-27 17:37:16] 2026-01-27 17:36:20,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 17:37:16] 2026-01-27 17:36:20,926 | INFO     | collected zombie processes
[2026-01-27 17:37:16] 2026-01-27 17:36:20,926 | INFO     | will attempt to kill all subprocesses of pid=315686
[2026-01-27 17:37:16] 2026-01-27 17:36:20,989 | INFO     | process IDs to be killed: [315686] (in reverse order)
[2026-01-27 17:37:16] 2026-01-27 17:36:21,023 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 17:37:16] 2026-01-27 17:36:21,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 17:37:16] 2026-01-27 17:36:21,025 | INFO     | did not find any defunct processes belonging to 315686
[2026-01-27 17:37:16] 2026-01-27 17:36:21,027 | INFO     | did not find any defunct processes belonging to 315686
[2026-01-27 17:37:16] 2026-01-27 17:36:21,027 | INFO     | ready for new job
[2026-01-27 17:37:16] 2026-01-27 17:36:21,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 17:37:16] 2026-01-27 17:36:21,028 | INFO     | **************************************
[2026-01-27 17:37:16] 2026-01-27 17:36:21,028 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 17:37:16] 2026-01-27 17:36:21,028 | INFO     | **************************************
[2026-01-27 17:37:16] 2026-01-27 17:36:21,028 | INFO     | 
[2026-01-27 17:37:16] 2026-01-27 17:36:21,029 | INFO     | architecture information:
[2026-01-27 17:37:16] 2026-01-27 17:36:21,029 | INFO     | executing command: cat /etc/os-release
[2026-01-27 17:37:16] 2026-01-27 17:36:21,037 | INFO     | cat /etc/os-release:
[2026-01-27 17:37:16] NAME="CentOS Linux"
[2026-01-27 17:37:16] VERSION="7 (Core)"
[2026-01-27 17:37:16] ID="centos"
[2026-01-27 17:37:16] ID_LIKE="rhel fedora"
[2026-01-27 17:37:16] VERSION_ID="7"
[2026-01-27 17:37:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 17:37:16] ANSI_COLOR="0;31"
[2026-01-27 17:37:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 17:37:16] HOME_URL="https://www.centos.org/"
[2026-01-27 17:37:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 17:37:16] 
[2026-01-27 17:37:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 17:37:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 17:37:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 17:37:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 17:37:16] 
[2026-01-27 17:37:16] 2026-01-27 17:36:21,037 | INFO     | **************************************
[2026-01-27 17:37:16] 2026-01-27 17:36:21,540 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | INFO     | sufficient remaining disk space (287436701696 B)
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | INFO     | update_server=False
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 17:37:16] 2026-01-27 17:36:21,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:37:16] 2026-01-27 17:36:21,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:37:16] 2026-01-27 17:36:21,857 | INFO     | aborting loop
[2026-01-27 17:37:16] 2026-01-27 17:36:21,921 | INFO     | job.realtimelogging is not enabled
[2026-01-27 17:37:16] 2026-01-27 17:36:22,011 | INFO     | all payload control threads have been joined
[2026-01-27 17:37:16] 2026-01-27 17:36:22,558 | INFO     | [job] retrieve thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:22,558 | INFO     | [job] queue monitor thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:22,600 | INFO     | all data control threads have been joined
[2026-01-27 17:37:16] 2026-01-27 17:36:22,617 | INFO     | all job control threads have been joined
[2026-01-27 17:37:16] 2026-01-27 17:36:22,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 17:37:16] 2026-01-27 17:36:22,862 | INFO     | [job] job monitor thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:22,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:22,955 | INFO     | [payload] validate_post thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,016 | INFO     | [payload] control thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,171 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,189 | INFO     | [job] validate thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,244 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,301 | INFO     | [data] copytool_in thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,364 | INFO     | [payload] failed_post thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,605 | INFO     | [data] control thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:23,622 | INFO     | [job] control thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:24,020 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:24,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 17:37:16] 2026-01-27 17:36:24,851 | INFO     | [data] copytool_out thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:28,571 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 17:37:16] 2026-01-27 17:36:51,630 | INFO     | PID=310937 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 17:37:16] 2026-01-27 17:36:51,630 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 17:37:16] 2026-01-27 17:36:51,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 17:37:16] 2026-01-27 17:36:51,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 17:37:16] 2026-01-27 17:37:09,515 | INFO     | [monitor] cgroup control has ended
[2026-01-27 17:37:16] 2026-01-27 17:37:11,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126616472700736)>', '<ExcThread(monitor, started 126615770101504)>']
[2026-01-27 17:37:16] 2026-01-27 17:37:11,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 17:37:16] 2026-01-27 17:37:11,731 | INFO     | [monitor] control thread has ended
[2026-01-27 17:37:16] 2026-01-27 17:37:16,155 | INFO     | all workflow threads have been joined
[2026-01-27 17:37:16] 2026-01-27 17:37:16,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 17:37:16] 2026-01-27 17:37:16,155 | INFO     | traces error code: 0
[2026-01-27 17:37:16] 2026-01-27 17:37:16,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 17:37:16] 2026-01-27 17:37:16,205 [wrapper] ==== pilot stdout END ====
[2026-01-27 17:37:16] 2026-01-27 17:37:16,206 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 17:37:16] 2026-01-27 17:37:16,208 [wrapper] pilotpid: 310937
[2026-01-27 17:37:16] 2026-01-27 17:37:16,210 [wrapper] Pilot exit status: 0
[2026-01-27 17:37:16] 2026-01-27 17:37:16,216 [wrapper] pandaids: 6983060978
[2026-01-27 17:37:16] 2026-01-27 17:37:16,239 [wrapper] cleanup supervisor_pilot  346204 310938
[2026-01-27 17:37:16] 2026-01-27 17:37:16,240 [wrapper] Test setup, not cleaning
[2026-01-27 17:37:16] 2026-01-27 17:37:16,241 [wrapper] apfmon messages muted
[2026-01-27 17:37:16] 2026-01-27 17:37:16,243 [wrapper] ==== wrapper stdout END ====
[2026-01-27 17:37:16] 2026-01-27 17:37:16,245 [wrapper] ==== wrapper stderr END ====
[2026-01-27 17:37:16]  *** Error codes and diagnostics ***
[2026-01-27 17:37:16]     "exeErrorCode": 0,
[2026-01-27 17:37:16]     "exeErrorDiag": "",
[2026-01-27 17:37:16]     "pilotErrorCode": 0,
[2026-01-27 17:37:16]     "pilotErrorDiag": "",
[2026-01-27 17:37:16]  *** Listing of results directory ***
[2026-01-27 17:37:16] total 667536
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc    584422 Jan 25 14:11 pilot3.tar.gz
[2026-01-27 17:37:16] -rwx------ 1 boinc boinc     36322 Jan 25 14:14 runpilot2-wrapper.sh
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc      5111 Jan 25 14:17 queuedata.json
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc       100 Jan 27 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 17:37:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 16:56 run_atlas
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc       105 Jan 27 16:56 job.xml
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc 495348795 Jan 27 16:56 EVNT.48310721._000185.pool.root.1
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc      9654 Jan 27 16:56 init_data.xml
[2026-01-27 17:37:16] drwxrwx--x 2 boinc boinc      4096 Jan 27 16:56 shared
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc    597757 Jan 27 16:56 input.tar.gz
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:56 start_atlas.sh
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc         0 Jan 27 16:56 boinc_lockfile
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc      2534 Jan 27 16:56 pandaJob.out
[2026-01-27 17:37:16] -rw------- 1 boinc boinc   1005178 Jan 27 16:57 agis_schedconf.cvmfs.json
[2026-01-27 17:37:16] -rw------- 1 boinc boinc   1516246 Jan 27 16:57 agis_ddmendpoints.agis.ALL.json
[2026-01-27 17:37:16] -rw------- 1 boinc boinc       417 Jan 27 16:57 workernode_map.json
[2026-01-27 17:37:16] drwx------ 5 boinc boinc      4096 Jan 27 16:57 pilot3
[2026-01-27 17:37:16] -rw------- 1 boinc boinc 182744265 Jan 27 17:35 HITS.48310724._009247.pool.root.1
[2026-01-27 17:37:16] -rw------- 1 boinc boinc      1013 Jan 27 17:36 memory_monitor_summary.json
[2026-01-27 17:37:16] -rw------- 1 boinc boinc    386732 Jan 27 17:36 log.48310724._009247.job.log.tgz.1
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc       530 Jan 27 17:36 boinc_task_state.xml
[2026-01-27 17:37:16] -rw------- 1 boinc boinc      6280 Jan 27 17:36 heartbeat.json
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc      8192 Jan 27 17:36 boinc_mmap_file
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc        27 Jan 27 17:36 wrapper_checkpoint.txt
[2026-01-27 17:37:16] -rw------- 1 boinc boinc        95 Jan 27 17:36 pilot_heartbeat.json
[2026-01-27 17:37:16] -rw------- 1 boinc boinc      4823 Jan 27 17:37 pilotlog.txt
[2026-01-27 17:37:16] -rw------- 1 boinc boinc    371996 Jan 27 17:37 log.48310724._009247.job.log.1
[2026-01-27 17:37:16] -rw------- 1 boinc boinc       357 Jan 27 17:37 output.list
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc       620 Jan 27 17:37 runtime_log
[2026-01-27 17:37:16] -rw------- 1 boinc boinc    778240 Jan 27 17:37 result.tar.gz
[2026-01-27 17:37:16] -rw------- 1 boinc boinc       649 Jan 27 17:37 Um2LDml3F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTm7KDmyINbum.diag
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc      8910 Jan 27 17:37 runtime_log.err
[2026-01-27 17:37:16] -rw-r--r-- 1 boinc boinc     21642 Jan 27 17:37 stderr.txt
[2026-01-27 17:37:16] HITS file was successfully produced:
[2026-01-27 17:37:16] -rw------- 1 boinc boinc 182744265 Jan 27 17:35 shared/HITS.pool.root.1
[2026-01-27 17:37:16]  *** Contents of shared directory: ***
[2026-01-27 17:37:16] total 663572
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc 495348795 Jan 27 16:56 ATLAS.root_0
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc    597757 Jan 27 16:56 input.tar.gz
[2026-01-27 17:37:16] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:56 start_atlas.sh
[2026-01-27 17:37:16] -rw------- 1 boinc boinc 182744265 Jan 27 17:35 HITS.pool.root.1
[2026-01-27 17:37:16] -rw------- 1 boinc boinc    778240 Jan 27 17:37 result.tar.gz
17:37:18 (306712): run_atlas exited; CPU time 26025.784149
17:37:18 (306712): called boinc_finish(0)

</stderr_txt>
]]>

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