Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:01:09 (1241627): wrapper (7.7.26015): starting
21:01:09 (1241627): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 21:01:09] Arguments: --nthreads 12
[2026-01-26 21:01:09] Threads: 12
[2026-01-26 21:01:09] Checking for CVMFS
[2026-01-26 21:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:01:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:01:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:01:10] 2.13.2.0 1045023 733 47308 155560 1 50 3796580 4096001 0 130560 0 526972 99.989 32736 313 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-01-26 21:01:10] CVMFS is ok
[2026-01-26 21:01:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 21:01:10] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 21:01:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 21:01:10] Further information can be found at the LHC@home message board.
[2026-01-26 21:01:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:01:10] Checking for apptainer binary...
[2026-01-26 21:01:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:01:10] Running /usr/bin/apptainer --version
[2026-01-26 21:01:10] apptainer version 1.4.3
[2026-01-26 21:01:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:01:10] tito-MS-7C02
[2026-01-26 21:01:10] apptainer works
[2026-01-26 21:01:10] Set ATHENA_PROC_NUMBER=12
[2026-01-26 21:01:10] Set ATHENA_CORE_NUMBER=12
[2026-01-26 21:01:10] Starting ATLAS job with PandaID=6983602157
[2026-01-26 21:01:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:40:36]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:40:36]  guid=61134c14-812a-40a3-8c0f-334f09215ebe
[2026-01-26 22:40:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 22:40:36]  is_altstaged=None
[2026-01-26 22:40:36]  is_tar=False
[2026-01-26 22:40:36]  lfn=log.48329784._000083.job.log.tgz.1
[2026-01-26 22:40:36]  mtime=0
[2026-01-26 22:40:36]  protocol_id=None
[2026-01-26 22:40:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 22:40:36]  replicas=None
[2026-01-26 22:40:36]  scope=mc23_13p6TeV
[2026-01-26 22:40:36]  status=None
[2026-01-26 22:40:36]  status_code=0
[2026-01-26 22:40:36]  storage_token=
[2026-01-26 22:40:36]  surl=/var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/log.48329784._000083.job.log.tgz.1
[2026-01-26 22:40:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/2f/log.48329784._000083.job.log.tgz.1
[2026-01-26 22:40:36]  workdir=None
[2026-01-26 22:40:36] ]
[2026-01-26 22:40:36] 2026-01-26 21:39:39,407 | INFO     | transferring file log.48329784._000083.job.log.tgz.1 from /var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/log.48329784._000083.job.log.tgz.1 to /var/lib/boin
[2026-01-26 22:40:36] 2026-01-26 21:39:39,407 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/log.48329784._000083.job.log.tgz.1 /var/lib/boinc-client/slots/25/log.4832
[2026-01-26 22:40:36] 2026-01-26 21:39:39,426 | INFO     | adding to output.list: log.48329784._000083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/2f/log.48329784._000083.job.log.tg
[2026-01-26 22:40:36] 2026-01-26 21:39:39,427 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 22:40:36] 2026-01-26 21:39:39,427 | INFO     | summary of transferred files:
[2026-01-26 22:40:36] 2026-01-26 21:39:39,427 | INFO     |  -- lfn=log.48329784._000083.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 22:40:36] 2026-01-26 21:39:39,427 | INFO     | stage-out finished correctly
[2026-01-26 22:40:36] 2026-01-26 21:39:39,477 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 22:40:36] 2026-01-26 21:39:39,829 | INFO     | time since job start (5897s) is within the limit (349056.0s)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,187 | WARNING  | process 1250290 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 22:40:36] 2026-01-26 21:39:40,188 | INFO     | using path: /var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,251 | INFO     | job 6983602157 has state=finished
[2026-01-26 22:40:36] 2026-01-26 21:39:40,251 | INFO     | preparing for final server update for job 6983602157 in state='finished'
[2026-01-26 22:40:36] 2026-01-26 21:39:40,251 | INFO     | reading metadata from: /var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/jobReport.json
[2026-01-26 22:40:36] 2026-01-26 21:39:40,252 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/25/workernode_map.json
[2026-01-26 22:40:36] 2026-01-26 21:39:40,253 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,253 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:40:36] 2026-01-26 21:39:40,253 | INFO     | job 6983602157 has finished - writing final server update
[2026-01-26 22:40:36] 2026-01-26 21:39:40,253 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | INFO     | using path: /var/lib/boinc-client/slots/25/PanDA_Pilot-6983602157/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | INFO     | extracted standard info from prmon json
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:40:36] 2026-01-26 21:39:40,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:40:36] 2026-01-26 21:39:40,257 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | sum of square deviations: 226022842.5
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | sum of deviations: -6599012421.500001
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | mean x: 1769460719.5
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | mean y: 2763951.855555556
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | intersect: 51664326731.01063
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | chi2: 0.09800533924162311
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | current memory leak: -29.20 B/s (using 90 data points, chi2=0.10)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | could have reported an average CPU frequency of 3541 MHz (7 samples)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | ..............................
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | . Timing measurements:
[2026-01-26 22:40:36] 2026-01-26 21:39:40,258 | INFO     | . get job = 0 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . initial setup = 4 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . payload setup = 3 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . stage-in = 0 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . payload execution = 5878 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . stage-out = 0 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | . log creation = 0 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,259 | INFO     | ..............................
[2026-01-26 22:40:36] 2026-01-26 21:39:40,320 | INFO     | number of running child processes to parent process 1250290: 1
[2026-01-26 22:40:36] 2026-01-26 21:39:40,320 | INFO     | maximum number of monitored processes: 6
[2026-01-26 22:40:36] 2026-01-26 21:39:40,320 | INFO     | aborting job monitoring since job object (job id=6983602157) has expired
[2026-01-26 22:40:36] 2026-01-26 21:39:40,454 | INFO     | 
[2026-01-26 22:40:36] 2026-01-26 21:39:40,454 | INFO     | job summary report
[2026-01-26 22:40:36] 2026-01-26 21:39:40,454 | INFO     | --------------------------------------------------
[2026-01-26 22:40:36] 2026-01-26 21:39:40,454 | INFO     | PanDA job id: 6983602157
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | task id: 48329784
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | errors: (none)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | pilot state: finished 
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | transexitcode: 0
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | exeerrorcode: 0
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | exeerrordiag: 
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | exitcode: 0
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | exitmsg: OK
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | cpuconsumptiontime: 66179 s
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | nevents: 400
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | neventsw: 0
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | pid: 1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | pgrp: 1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | corecount: 12
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | event service: False
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | sizes: {0: 2284451, 11: 2284451, 5885: 2311325, 5886: 2320395, 5887: 2320533}
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | --------------------------------------------------
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | 
[2026-01-26 22:40:36] 2026-01-26 21:39:40,455 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/25
[2026-01-26 22:40:36] 2026-01-26 21:39:40,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:40:36] 2026-01-26 21:39:40,474 | INFO     | job 6983602157 has completed (purged errors)
[2026-01-26 22:40:36] 2026-01-26 21:39:40,474 | INFO     | overall cleanup function is called
[2026-01-26 22:40:36] 2026-01-26 21:39:40,916 | INFO     | PID=1245777 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:40:36] 2026-01-26 21:39:41,481 | INFO     | --- collectZombieJob: --- 10, [1250290]
[2026-01-26 22:40:36] 2026-01-26 21:39:41,481 | INFO     | zombie collector waiting for pid 1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:41,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:40:36] 2026-01-26 21:39:41,481 | INFO     | collected zombie processes
[2026-01-26 22:40:36] 2026-01-26 21:39:41,481 | INFO     | will attempt to kill all subprocesses of pid=1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:41,564 | INFO     | process IDs to be killed: [1250290] (in reverse order)
[2026-01-26 22:40:36] 2026-01-26 21:39:41,607 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:40:36] 2026-01-26 21:39:41,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:40:36] 2026-01-26 21:39:41,610 | INFO     | did not find any defunct processes belonging to 1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:41,613 | INFO     | did not find any defunct processes belonging to 1250290
[2026-01-26 22:40:36] 2026-01-26 21:39:41,613 | INFO     | ready for new job
[2026-01-26 22:40:36] 2026-01-26 21:39:41,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:40:36] 2026-01-26 21:39:41,614 | INFO     | **************************************
[2026-01-26 22:40:36] 2026-01-26 21:39:41,614 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:40:36] 2026-01-26 21:39:41,614 | INFO     | **************************************
[2026-01-26 22:40:36] 2026-01-26 21:39:41,614 | INFO     | 
[2026-01-26 22:40:36] 2026-01-26 21:39:41,615 | INFO     | architecture information:
[2026-01-26 22:40:36] 2026-01-26 21:39:41,615 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:40:36] 2026-01-26 21:39:41,629 | INFO     | cat /etc/os-release:
[2026-01-26 22:40:36] NAME="CentOS Linux"
[2026-01-26 22:40:36] VERSION="7 (Core)"
[2026-01-26 22:40:36] ID="centos"
[2026-01-26 22:40:36] ID_LIKE="rhel fedora"
[2026-01-26 22:40:36] VERSION_ID="7"
[2026-01-26 22:40:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:40:36] ANSI_COLOR="0;31"
[2026-01-26 22:40:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:40:36] HOME_URL="https://www.centos.org/"
[2026-01-26 22:40:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:40:36] 
[2026-01-26 22:40:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:40:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:40:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:40:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:40:36] 
[2026-01-26 22:40:36] 2026-01-26 21:39:41,629 | INFO     | **************************************
[2026-01-26 22:40:36] 2026-01-26 21:39:42,132 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/25
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | INFO     | sufficient remaining disk space (189162061824 B)
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | INFO     | update_server=False
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:40:36] 2026-01-26 21:39:42,148 | INFO     | aborting loop
[2026-01-26 22:40:36] 2026-01-26 21:39:42,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:40:36] 2026-01-26 21:39:42,415 | INFO     | all job control threads have been joined
[2026-01-26 22:40:36] 2026-01-26 21:39:42,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:40:36] 2026-01-26 21:39:42,527 | INFO     | all data control threads have been joined
[2026-01-26 22:40:36] 2026-01-26 21:39:42,558 | INFO     | all payload control threads have been joined
[2026-01-26 22:40:36] 2026-01-26 21:39:43,153 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,154 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,155 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,189 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,274 | INFO     | [job] validate thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,420 | INFO     | [job] control thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,531 | INFO     | [data] control thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,537 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,563 | INFO     | [payload] control thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,575 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:43,813 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:44,087 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:44,487 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:44,517 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:44,560 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:39:45,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:40:36] 2026-01-26 21:39:49,540 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:40:36] 2026-01-26 21:40:13,057 | INFO     | PID=1245777 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:40:36] 2026-01-26 21:40:13,060 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:40:36] 2026-01-26 21:40:13,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:40:36] 2026-01-26 21:40:13,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:40:36] 2026-01-26 21:40:31,142 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:40:36] 2026-01-26 21:40:31,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134963380819776)>', '<ExcThread(monitor, started 134962835621632)>']
[2026-01-26 22:40:36] 2026-01-26 21:40:32,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:40:36] 2026-01-26 21:40:32,155 | INFO     | [monitor] control thread has ended
[2026-01-26 22:40:36] 2026-01-26 21:40:36,200 | INFO     | all workflow threads have been joined
[2026-01-26 22:40:36] 2026-01-26 21:40:36,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:40:36] 2026-01-26 21:40:36,201 | INFO     | traces error code: 0
[2026-01-26 22:40:36] 2026-01-26 21:40:36,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:40:36] 2026-01-26 21:40:36,273 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:40:36] 2026-01-26 21:40:36,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:40:36] 2026-01-26 21:40:36,276 [wrapper] pilotpid: 1245777
[2026-01-26 22:40:36] 2026-01-26 21:40:36,278 [wrapper] Pilot exit status: 0
[2026-01-26 22:40:36] 2026-01-26 21:40:36,284 [wrapper] pandaids: 6983602157
[2026-01-26 22:40:36] 2026-01-26 21:40:36,311 [wrapper] cleanup supervisor_pilot 1258927 1245778
[2026-01-26 22:40:36] 2026-01-26 21:40:36,313 [wrapper] Test setup, not cleaning
[2026-01-26 22:40:36] 2026-01-26 21:40:36,315 [wrapper] apfmon messages muted
[2026-01-26 22:40:36] 2026-01-26 21:40:36,316 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:40:36] 2026-01-26 21:40:36,318 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:40:36]  *** Error codes and diagnostics ***
[2026-01-26 22:40:36]     "exeErrorCode": 0,
[2026-01-26 22:40:36]     "exeErrorDiag": "",
[2026-01-26 22:40:36]     "pilotErrorCode": 0,
[2026-01-26 22:40:36]     "pilotErrorDiag": "",
[2026-01-26 22:40:36]  *** Listing of results directory ***
[2026-01-26 22:40:36] razem 473120
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc    584422 sty 26 02:12 pilot3.tar.gz
[2026-01-26 22:40:36] -rwx------ 1 boinc boinc     36322 sty 26 02:15 runpilot2-wrapper.sh
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc      5111 sty 26 02:18 queuedata.json
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc       100 sty 26 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:40:36] -rwxr-xr-x 1 boinc boinc      7986 sty 26 21:01 run_atlas
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc       105 sty 26 21:01 job.xml
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc      9548 sty 26 21:01 init_data.xml
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc 271971245 sty 26 21:01 EVNT.48329782._000004.pool.root.1
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc     15845 sty 26 21:01 start_atlas.sh
[2026-01-26 22:40:36] drwxrwx--x 2 boinc boinc      4096 sty 26 21:01 shared
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc    597797 sty 26 21:01 input.tar.gz
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc         0 sty 26 21:01 boinc_lockfile
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc      2693 sty 26 21:01 pandaJob.out
[2026-01-26 22:40:36] -rw------- 1 boinc boinc   1006449 sty 26 21:01 agis_schedconf.cvmfs.json
[2026-01-26 22:40:36] -rw------- 1 boinc boinc   1516246 sty 26 21:01 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:40:36] -rw------- 1 boinc boinc       426 sty 26 21:01 workernode_map.json
[2026-01-26 22:40:36] drwx------ 5 boinc boinc      4096 sty 26 21:01 pilot3
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc       529 sty 26 22:39 boinc_task_state.xml
[2026-01-26 22:40:36] -rw------- 1 boinc boinc 206045468 sty 26 22:39 HITS.48329784._000083.pool.root.1
[2026-01-26 22:40:36] -rw------- 1 boinc boinc      1011 sty 26 22:39 memory_monitor_summary.json
[2026-01-26 22:40:36] -rw------- 1 boinc boinc    397739 sty 26 22:39 log.48329784._000083.job.log.tgz.1
[2026-01-26 22:40:36] -rw------- 1 boinc boinc      6279 sty 26 22:39 heartbeat.json
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc        27 sty 26 22:40 wrapper_checkpoint.txt
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc      8192 sty 26 22:40 boinc_mmap_file
[2026-01-26 22:40:36] -rw------- 1 boinc boinc        95 sty 26 22:40 pilot_heartbeat.json
[2026-01-26 22:40:36] -rw------- 1 boinc boinc      4753 sty 26 22:40 pilotlog.txt
[2026-01-26 22:40:36] -rw------- 1 boinc boinc    859334 sty 26 22:40 log.48329784._000083.job.log.1
[2026-01-26 22:40:36] -rw------- 1 boinc boinc       357 sty 26 22:40 output.list
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc       620 sty 26 22:40 runtime_log
[2026-01-26 22:40:36] -rw------- 1 boinc boinc   1269760 sty 26 22:40 result.tar.gz
[2026-01-26 22:40:36] -rw------- 1 boinc boinc       644 sty 26 22:40 x03MDmONQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaI2KDmtZFv4m.diag
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc      8913 sty 26 22:40 runtime_log.err
[2026-01-26 22:40:36] -rw-r--r-- 1 boinc boinc     21638 sty 26 22:40 stderr.txt
[2026-01-26 22:40:36] HITS file was successfully produced:
[2026-01-26 22:40:36] -rw------- 1 boinc boinc 206045468 sty 26 22:39 shared/HITS.pool.root.1
[2026-01-26 22:40:36]  *** Contents of shared directory: ***
[2026-01-26 22:40:36] razem 468668
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc 271971245 sty 26 21:01 ATLAS.root_0
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc     15845 sty 26 21:01 start_atlas.sh
[2026-01-26 22:40:36] -rw-r--r-- 2 boinc boinc    597797 sty 26 21:01 input.tar.gz
[2026-01-26 22:40:36] -rw------- 1 boinc boinc 206045468 sty 26 22:39 HITS.pool.root.1
[2026-01-26 22:40:36] -rw------- 1 boinc boinc   1269760 sty 26 22:40 result.tar.gz
22:40:37 (1241627): run_atlas exited; CPU time 66219.240387
22:40:37 (1241627): called boinc_finish(0)

</stderr_txt>
]]>

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