Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
20:01:13 (193922): wrapper (7.7.26015): starting
20:01:13 (193922): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 20:01:13] Arguments: --nthreads 12
[2026-01-26 20:01:13] Threads: 12
[2026-01-26 20:01:13] Checking for CVMFS
[2026-01-26 20:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:01:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:01:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:01:17] 2.13.3.0 194132 0 24800 155560 3 1 3035693 4096001 0 130560 0 0 0.000 1336 1737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 20:01:17] CVMFS is ok
[2026-01-26 20:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:01:17] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 20:01:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 20:01:17] Further information can be found at the LHC@home message board.
[2026-01-26 20:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:01:17] Checking for apptainer binary...
[2026-01-26 20:01:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:01:17] Running /usr/bin/apptainer --version
[2026-01-26 20:01:17] apptainer version 1.4.5
[2026-01-26 20:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:01:17] test-run
[2026-01-26 20:01:17] apptainer works
[2026-01-26 20:01:17] Set ATHENA_PROC_NUMBER=12
[2026-01-26 20:01:17] Set ATHENA_CORE_NUMBER=12
[2026-01-26 20:01:17] Starting ATLAS job with PandaID=6981854907
[2026-01-26 20:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/32 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:30:40]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:30:40]  is_tar=False
[2026-01-26 20:30:40]  lfn=log.48310826._006126.job.log.tgz.1
[2026-01-26 20:30:40]  mtime=0
[2026-01-26 20:30:40]  protocol_id=None
[2026-01-26 20:30:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 20:30:40]  replicas=None
[2026-01-26 20:30:40]  scope=mc23_13p6TeV
[2026-01-26 20:30:40]  status=None
[2026-01-26 20:30:40]  status_code=0
[2026-01-26 20:30:40]  storage_token=
[2026-01-26 20:30:40]  surl=/var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/log.48310826._006126.job.log.tgz.1
[2026-01-26 20:30:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/86/log.48310826._006126.job.log.tgz.1
[2026-01-26 20:30:40]  workdir=None
[2026-01-26 20:30:40] ]
[2026-01-26 20:30:40] 2026-01-26 20:29:39,442 | INFO     | transferring file log.48310826._006126.job.log.tgz.1 from /var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/log.48310826._006126.job.log.tgz.1 to /var/lib/boin
[2026-01-26 20:30:40] 2026-01-26 20:29:39,442 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/log.48310826._006126.job.log.tgz.1 /var/lib/boinc-client/slots/32/log.4831
[2026-01-26 20:30:40] 2026-01-26 20:29:39,450 | INFO     | adding to output.list: log.48310826._006126.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/86/log.48310826._006126.job.log.tg
[2026-01-26 20:30:40] 2026-01-26 20:29:39,451 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 20:30:40] 2026-01-26 20:29:39,451 | INFO     | summary of transferred files:
[2026-01-26 20:30:40] 2026-01-26 20:29:39,451 | INFO     |  -- lfn=log.48310826._006126.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 20:30:40] 2026-01-26 20:29:39,451 | INFO     | stage-out finished correctly
[2026-01-26 20:30:40] 2026-01-26 20:29:39,593 | INFO     | time since job start (1689s) is within the limit (349056.0s)
[2026-01-26 20:30:40] 2026-01-26 20:29:39,593 | INFO     | 1692s have passed since pilot start - server update state is 'RUNNING'
[2026-01-26 20:30:40] 2026-01-26 20:29:41,599 | INFO     | time since job start (1691s) is within the limit (349056.0s)
[2026-01-26 20:30:40] 2026-01-26 20:29:41,710 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 20:30:40] 2026-01-26 20:29:42,428 | WARNING  | process 211438 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:30:40] 2026-01-26 20:29:42,428 | INFO     | using path: /var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:30:40] 2026-01-26 20:29:42,460 | INFO     | number of running child processes to parent process 211438: 1
[2026-01-26 20:30:40] 2026-01-26 20:29:42,460 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:30:40] 2026-01-26 20:29:43,496 | INFO     | job 6981854907 has state=finished
[2026-01-26 20:30:40] 2026-01-26 20:29:43,496 | INFO     | preparing for final server update for job 6981854907 in state='finished'
[2026-01-26 20:30:40] 2026-01-26 20:29:43,496 | INFO     | reading metadata from: /var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/jobReport.json
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/32/workernode_map.json
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | job 6981854907 has finished - writing final server update
[2026-01-26 20:30:40] 2026-01-26 20:29:43,498 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | INFO     | using path: /var/lib/boinc-client/slots/32/PanDA_Pilot-6981854907/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | INFO     | extracted standard info from prmon json
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:30:40] 2026-01-26 20:29:43,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | sum of square deviations: 2865170.0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | sum of deviations: -433554755.00000006
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | mean x: 1769458620.0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | mean y: 2749064.095238095
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | intersect: 267755517129.07504
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | chi2: 0.00876894398543673
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | current memory leak: -151.32 B/s (using 21 data points, chi2=0.01)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | ..............................
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . Timing measurements:
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . get job = 0 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . initial setup = 3 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . payload setup = 1 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . stage-in = 0 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . payload execution = 1672 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . stage-out = 0 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | . log creation = 0 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,501 | INFO     | ..............................
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | 
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | job summary report
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | --------------------------------------------------
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | PanDA job id: 6981854907
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | task id: 48310826
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | errors: (none)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | pilot state: finished 
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | transexitcode: 0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | exeerrorcode: 0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | exeerrordiag: 
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | exitcode: 0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | exitmsg: OK
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | cpuconsumptiontime: 15848 s
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | nevents: 400
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | neventsw: 0
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | pid: 211438
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | pgrp: 211438
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | corecount: 12
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | event service: False
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | sizes: {0: 2284247, 10: 2284247, 1678: 2318110, 1680: 2318110, 1682: 2318304}
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | --------------------------------------------------
[2026-01-26 20:30:40] 2026-01-26 20:29:43,537 | INFO     | 
[2026-01-26 20:30:40] 2026-01-26 20:29:43,538 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/32
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:30:40] 2026-01-26 20:29:43,557 | INFO     | job 6981854907 has completed (purged errors)
[2026-01-26 20:30:40] 2026-01-26 20:29:43,557 | INFO     | overall cleanup function is called
[2026-01-26 20:30:40] 2026-01-26 20:29:44,563 | INFO     | --- collectZombieJob: --- 10, [211438]
[2026-01-26 20:30:40] 2026-01-26 20:29:44,563 | INFO     | zombie collector waiting for pid 211438
[2026-01-26 20:30:40] 2026-01-26 20:29:44,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:30:40] 2026-01-26 20:29:44,563 | INFO     | collected zombie processes
[2026-01-26 20:30:40] 2026-01-26 20:29:44,563 | INFO     | will attempt to kill all subprocesses of pid=211438
[2026-01-26 20:30:40] 2026-01-26 20:29:44,600 | INFO     | process IDs to be killed: [211438] (in reverse order)
[2026-01-26 20:30:40] 2026-01-26 20:29:44,624 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:30:40] 2026-01-26 20:29:44,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:30:40] 2026-01-26 20:29:44,626 | INFO     | did not find any defunct processes belonging to 211438
[2026-01-26 20:30:40] 2026-01-26 20:29:44,627 | INFO     | did not find any defunct processes belonging to 211438
[2026-01-26 20:30:40] 2026-01-26 20:29:44,627 | INFO     | ready for new job
[2026-01-26 20:30:40] 2026-01-26 20:29:44,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | **************************************
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | **************************************
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | 
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | pilot is running in a VM
[2026-01-26 20:30:40] 2026-01-26 20:29:44,628 | INFO     | architecture information:
[2026-01-26 20:30:40] 2026-01-26 20:29:44,629 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:30:40] 2026-01-26 20:29:44,637 | INFO     | cat /etc/os-release:
[2026-01-26 20:30:40] NAME="CentOS Linux"
[2026-01-26 20:30:40] VERSION="7 (Core)"
[2026-01-26 20:30:40] ID="centos"
[2026-01-26 20:30:40] ID_LIKE="rhel fedora"
[2026-01-26 20:30:40] VERSION_ID="7"
[2026-01-26 20:30:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:30:40] ANSI_COLOR="0;31"
[2026-01-26 20:30:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:30:40] HOME_URL="https://www.centos.org/"
[2026-01-26 20:30:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:30:40] 
[2026-01-26 20:30:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:30:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:30:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:30:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:30:40] 
[2026-01-26 20:30:40] 2026-01-26 20:29:44,637 | INFO     | **************************************
[2026-01-26 20:30:40] 2026-01-26 20:29:45,140 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/32
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | INFO     | sufficient remaining disk space (70173851648 B)
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | INFO     | update_server=False
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:30:40] 2026-01-26 20:29:45,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:30:40] 2026-01-26 20:29:45,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:30:40] 2026-01-26 20:29:45,440 | INFO     | all job control threads have been joined
[2026-01-26 20:30:40] 2026-01-26 20:29:45,919 | INFO     | all data control threads have been joined
[2026-01-26 20:30:40] 2026-01-26 20:29:45,963 | INFO     | all payload control threads have been joined
[2026-01-26 20:30:40] 2026-01-26 20:29:45,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:30:40] 2026-01-26 20:29:45,968 | INFO     | aborting loop
[2026-01-26 20:30:40] 2026-01-26 20:29:46,162 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,163 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,446 | INFO     | [job] control thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,524 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,609 | INFO     | [job] validate thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,644 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,681 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,779 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,924 | INFO     | [data] control thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,969 | INFO     | [payload] control thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:46,971 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:47,163 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:47,415 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:47,636 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:47,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:30:40] 2026-01-26 20:29:51,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:29:55,247 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:30:40] 2026-01-26 20:29:56,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:30:40] 2026-01-26 20:30:14,711 | INFO     | PID=202215 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 20:30:40] 2026-01-26 20:30:14,711 | INFO     | .. there are 2 such processes running
[2026-01-26 20:30:40] 2026-01-26 20:30:14,711 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:30:40] 2026-01-26 20:30:14,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:30:40] 2026-01-26 20:30:14,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:30:40] 2026-01-26 20:30:33,270 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:30:40] 2026-01-26 20:30:35,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130346924586816)>', '<ExcThread(monitor, started 130346209240832)>']
[2026-01-26 20:30:40] 2026-01-26 20:30:35,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:30:40] 2026-01-26 20:30:35,787 | INFO     | [monitor] control thread has ended
[2026-01-26 20:30:40] 2026-01-26 20:30:40,143 | INFO     | all workflow threads have been joined
[2026-01-26 20:30:40] 2026-01-26 20:30:40,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:30:40] 2026-01-26 20:30:40,143 | INFO     | traces error code: 0
[2026-01-26 20:30:40] 2026-01-26 20:30:40,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:30:40] 2026-01-26 20:30:40,197 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:30:40] 2026-01-26 20:30:40,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:30:40] 2026-01-26 20:30:40,199 [wrapper] pilotpid: 202215
[2026-01-26 20:30:40] 2026-01-26 20:30:40,200 [wrapper] Pilot exit status: 0
[2026-01-26 20:30:40] 2026-01-26 20:30:40,205 [wrapper] pandaids: 6981854907
[2026-01-26 20:30:40] 2026-01-26 20:30:40,218 [wrapper] cleanup supervisor_pilot  220565 202216
[2026-01-26 20:30:40] 2026-01-26 20:30:40,219 [wrapper] Test setup, not cleaning
[2026-01-26 20:30:40] 2026-01-26 20:30:40,220 [wrapper] apfmon messages muted
[2026-01-26 20:30:40] 2026-01-26 20:30:40,221 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:30:40] 2026-01-26 20:30:40,222 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:30:40]  *** Error codes and diagnostics ***
[2026-01-26 20:30:40]     "exeErrorCode": 0,
[2026-01-26 20:30:40]     "exeErrorDiag": "",
[2026-01-26 20:30:40]     "pilotErrorCode": 0,
[2026-01-26 20:30:40]     "pilotErrorDiag": "",
[2026-01-26 20:30:40]  *** Listing of results directory ***
[2026-01-26 20:30:40] total 665164
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc    584422 Jan 24 21:51 pilot3.tar.gz
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc      5111 Jan 24 21:52 queuedata.json
[2026-01-26 20:30:40] -rwx------ 1 boinc boinc     36322 Jan 24 21:52 runpilot2-wrapper.sh
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc       100 Jan 26 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:30:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 20:01 run_atlas
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc       105 Jan 26 20:01 job.xml
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:01 start_atlas.sh
[2026-01-26 20:30:40] drwxrwx--x 2 boinc boinc      4096 Jan 26 20:01 shared
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc    597754 Jan 26 20:01 input.tar.gz
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc      6942 Jan 26 20:01 init_data.xml
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc 494835034 Jan 26 20:01 EVNT.48310824._000042.pool.root.1
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:01 boinc_lockfile
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc      2522 Jan 26 20:01 pandaJob.out
[2026-01-26 20:30:40] -rw------- 1 boinc boinc   1006449 Jan 26 20:01 agis_schedconf.cvmfs.json
[2026-01-26 20:30:40] -rw------- 1 boinc boinc   1516246 Jan 26 20:01 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:30:40] -rw------- 1 boinc boinc       420 Jan 26 20:01 workernode_map.json
[2026-01-26 20:30:40] drwx------ 5 boinc boinc      4096 Jan 26 20:01 pilot3
[2026-01-26 20:30:40] -rw------- 1 boinc boinc 181068604 Jan 26 20:29 HITS.48310826._006126.pool.root.1
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc       530 Jan 26 20:29 boinc_task_state.xml
[2026-01-26 20:30:40] -rw------- 1 boinc boinc      1016 Jan 26 20:29 memory_monitor_summary.json
[2026-01-26 20:30:40] -rw------- 1 boinc boinc        95 Jan 26 20:29 pilot_heartbeat.json
[2026-01-26 20:30:40] -rw------- 1 boinc boinc    353451 Jan 26 20:29 log.48310826._006126.job.log.tgz.1
[2026-01-26 20:30:40] -rw------- 1 boinc boinc      6277 Jan 26 20:29 heartbeat.json
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc      8192 Jan 26 20:30 boinc_mmap_file
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc        27 Jan 26 20:30 wrapper_checkpoint.txt
[2026-01-26 20:30:40] -rw------- 1 boinc boinc      4960 Jan 26 20:30 pilotlog.txt
[2026-01-26 20:30:40] -rw------- 1 boinc boinc    288777 Jan 26 20:30 log.48310826._006126.job.log.1
[2026-01-26 20:30:40] -rw------- 1 boinc boinc       357 Jan 26 20:30 output.list
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc       620 Jan 26 20:30 runtime_log
[2026-01-26 20:30:40] -rw------- 1 boinc boinc    655360 Jan 26 20:30 result.tar.gz
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc      8905 Jan 26 20:30 runtime_log.err
[2026-01-26 20:30:40] -rw------- 1 boinc boinc       642 Jan 26 20:30 FTJLDmzj038nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcw5KDmjh3Fnn.diag
[2026-01-26 20:30:40] -rw-r--r-- 1 boinc boinc     21721 Jan 26 20:30 stderr.txt
[2026-01-26 20:30:40] HITS file was successfully produced:
[2026-01-26 20:30:40] -rw------- 1 boinc boinc 181068604 Jan 26 20:29 shared/HITS.pool.root.1
[2026-01-26 20:30:40]  *** Contents of shared directory: ***
[2026-01-26 20:30:40] total 661316
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:01 start_atlas.sh
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc    597754 Jan 26 20:01 input.tar.gz
[2026-01-26 20:30:40] -rw-r--r-- 2 boinc boinc 494835034 Jan 26 20:01 ATLAS.root_0
[2026-01-26 20:30:40] -rw------- 1 boinc boinc 181068604 Jan 26 20:29 HITS.pool.root.1
[2026-01-26 20:30:40] -rw------- 1 boinc boinc    655360 Jan 26 20:30 result.tar.gz
20:30:41 (193922): run_atlas exited; CPU time 15854.080944
20:30:41 (193922): called boinc_finish(0)

</stderr_txt>
]]>

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