Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:43:26 (492529): wrapper (7.7.26015): starting
11:43:26 (492529): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 11:43:26] Arguments: --nthreads 4
[2026-01-26 11:43:26] Threads: 4
[2026-01-26 11:43:26] Checking for CVMFS
[2026-01-26 11:43:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:43:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:43:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:43:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:43:30] 2.13.3.0 2034755 2531 53276 155560 0 11 4925575 6144001 2769 130560 0 5989441 99.997 95813 1212 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 11:43:30] CVMFS is ok
[2026-01-26 11:43:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:43:30] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 11:43:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 11:43:30] Further information can be found at the LHC@home message board.
[2026-01-26 11:43:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:43:30] Checking for apptainer binary...
[2026-01-26 11:43:30] apptainer is not installed, using version from CVMFS
[2026-01-26 11:43:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:43:30] desktop-b650ef
[2026-01-26 11:43:30] apptainer works
[2026-01-26 11:43:30] Set ATHENA_PROC_NUMBER=4
[2026-01-26 11:43:30] Set ATHENA_CORE_NUMBER=4
[2026-01-26 11:43:30] Starting ATLAS job with PandaID=6983449236
[2026-01-26 11:43:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:21:59]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:21:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 13:21:59]  is_altstaged=None
[2026-01-26 13:21:59]  is_tar=False
[2026-01-26 13:21:59]  lfn=log.48298567._000306.job.log.tgz.1
[2026-01-26 13:21:59]  mtime=0
[2026-01-26 13:21:59]  protocol_id=None
[2026-01-26 13:21:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 13:21:59]  replicas=None
[2026-01-26 13:21:59]  scope=mc23_13p6TeV
[2026-01-26 13:21:59]  status=None
[2026-01-26 13:21:59]  status_code=0
[2026-01-26 13:21:59]  storage_token=
[2026-01-26 13:21:59]  surl=/var/lib/boinc-client/slots/15/PanDA_Pilot-6983449236/log.48298567._000306.job.log.tgz.1
[2026-01-26 13:21:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/98/log.48298567._000306.job.log.tgz.1
[2026-01-26 13:21:59]  workdir=None
[2026-01-26 13:21:59] ]
[2026-01-26 13:21:59] 2026-01-26 21:21:21,026 | INFO     | transferring file log.48298567._000306.job.log.tgz.1 from /var/lib/boinc-client/slots/15/PanDA_Pilot-6983449236/log.48298567._000306.job.log.tgz.1 to /var/lib/boin
[2026-01-26 13:21:59] 2026-01-26 21:21:21,026 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/15/PanDA_Pilot-6983449236/log.48298567._000306.job.log.tgz.1 /var/lib/boinc-client/slots/15/log.4829
[2026-01-26 13:21:59] 2026-01-26 21:21:21,034 | INFO     | adding to output.list: log.48298567._000306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/98/log.48298567._000306.job.log.tg
[2026-01-26 13:21:59] 2026-01-26 21:21:21,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 13:21:59] 2026-01-26 21:21:21,034 | INFO     | summary of transferred files:
[2026-01-26 13:21:59] 2026-01-26 21:21:21,034 | INFO     |  -- lfn=log.48298567._000306.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 13:21:59] 2026-01-26 21:21:21,034 | INFO     | stage-out finished correctly
[2026-01-26 13:21:59] 2026-01-26 21:21:21,714 | INFO     | time since job start (5857s) is within the limit (349056.0s)
[2026-01-26 13:21:59] 2026-01-26 21:21:21,931 | INFO     | monitor loop #444: job 0:6983449236 is in state 'finished'
[2026-01-26 13:21:59] 2026-01-26 21:21:21,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:21:59] 2026-01-26 21:21:23,720 | INFO     | time since job start (5859s) is within the limit (349056.0s)
[2026-01-26 13:21:59] 2026-01-26 21:21:24,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 13:21:59] 2026-01-26 21:21:24,434 | INFO     | monitor loop #445: job 0:6983449236 is in state 'finished'
[2026-01-26 13:21:59] 2026-01-26 21:21:24,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:21:59] 2026-01-26 21:21:25,725 | INFO     | time since job start (5861s) is within the limit (349056.0s)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,685 | INFO     | job 6983449236 has state=finished
[2026-01-26 13:21:59] 2026-01-26 21:21:26,685 | INFO     | preparing for final server update for job 6983449236 in state='finished'
[2026-01-26 13:21:59] 2026-01-26 21:21:26,685 | INFO     | reading metadata from: /var/lib/boinc-client/slots/15/PanDA_Pilot-6983449236/jobReport.json
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/15/workernode_map.json
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | job 6983449236 has finished - writing final server update
[2026-01-26 13:21:59] 2026-01-26 21:21:26,686 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | INFO     | using path: /var/lib/boinc-client/slots/15/PanDA_Pilot-6983449236/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | INFO     | extracted standard info from prmon json
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:21:59] 2026-01-26 21:21:26,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | sum of square deviations: 218571540.0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | sum of deviations: -11993334378.999998
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | mean x: 1769459630.0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | mean y: 2419178.393258427
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | intersect: 97095210914.82709
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | chi2: 0.07797753878345005
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | current memory leak: -54.87 B/s (using 89 data points, chi2=0.08)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | could have reported an average CPU frequency of 4475 MHz (7 samples)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | ..............................
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . Timing measurements:
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . get job = 0 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . initial setup = 5 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . payload setup = 3 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . stage-in = 0 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . payload execution = 5839 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . stage-out = 0 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | . log creation = 0 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,689 | INFO     | ..............................
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | 
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | job summary report
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | --------------------------------------------------
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | PanDA job id: 6983449236
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | task id: 48298567
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | errors: (none)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | pilot state: finished 
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | transexitcode: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | exeerrorcode: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | exeerrordiag: 
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | exitcode: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | exitmsg: OK
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | cpuconsumptiontime: 22455 s
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | nevents: 400
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | neventsw: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | pid: 501418
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | pgrp: 501418
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | corecount: 4
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | event service: False
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | sizes: {0: 2284373, 11: 2284373, 5845: 2320264, 5848: 2320264, 5851: 2320458}
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | --------------------------------------------------
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | 
[2026-01-26 13:21:59] 2026-01-26 21:21:26,711 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/15
[2026-01-26 13:21:59] 2026-01-26 21:21:26,719 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,719 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,719 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | job 6983449236 has completed (purged errors)
[2026-01-26 13:21:59] 2026-01-26 21:21:26,720 | INFO     | overall cleanup function is called
[2026-01-26 13:21:59] 2026-01-26 21:21:27,723 | INFO     | --- collectZombieJob: --- 10, [501418]
[2026-01-26 13:21:59] 2026-01-26 21:21:27,723 | INFO     | zombie collector waiting for pid 501418
[2026-01-26 13:21:59] 2026-01-26 21:21:27,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:21:59] 2026-01-26 21:21:27,723 | INFO     | collected zombie processes
[2026-01-26 13:21:59] 2026-01-26 21:21:27,723 | INFO     | will attempt to kill all subprocesses of pid=501418
[2026-01-26 13:21:59] 2026-01-26 21:21:27,783 | INFO     | process IDs to be killed: [501418] (in reverse order)
[2026-01-26 13:21:59] 2026-01-26 21:21:27,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:21:59] 2026-01-26 21:21:27,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:21:59] 2026-01-26 21:21:27,819 | INFO     | did not find any defunct processes belonging to 501418
[2026-01-26 13:21:59] 2026-01-26 21:21:27,821 | INFO     | did not find any defunct processes belonging to 501418
[2026-01-26 13:21:59] 2026-01-26 21:21:27,821 | INFO     | ready for new job
[2026-01-26 13:21:59] 2026-01-26 21:21:27,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:21:59] 2026-01-26 21:21:27,822 | INFO     | **************************************
[2026-01-26 13:21:59] 2026-01-26 21:21:27,822 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:21:59] 2026-01-26 21:21:27,822 | INFO     | **************************************
[2026-01-26 13:21:59] 2026-01-26 21:21:27,822 | INFO     | 
[2026-01-26 13:21:59] 2026-01-26 21:21:27,822 | INFO     | architecture information:
[2026-01-26 13:21:59] 2026-01-26 21:21:27,823 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:21:59] 2026-01-26 21:21:27,829 | INFO     | cat /etc/os-release:
[2026-01-26 13:21:59] NAME="CentOS Linux"
[2026-01-26 13:21:59] VERSION="7 (Core)"
[2026-01-26 13:21:59] ID="centos"
[2026-01-26 13:21:59] ID_LIKE="rhel fedora"
[2026-01-26 13:21:59] VERSION_ID="7"
[2026-01-26 13:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:21:59] ANSI_COLOR="0;31"
[2026-01-26 13:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:21:59] HOME_URL="https://www.centos.org/"
[2026-01-26 13:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:21:59] 
[2026-01-26 13:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:21:59] 
[2026-01-26 13:21:59] 2026-01-26 21:21:27,829 | INFO     | **************************************
[2026-01-26 13:21:59] 2026-01-26 21:21:28,332 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/15
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | INFO     | sufficient remaining disk space (407640211456 B)
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | INFO     | update_server=False
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:21:59] 2026-01-26 21:21:28,341 | INFO     | aborting loop
[2026-01-26 13:21:59] 2026-01-26 21:21:29,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:21:59] 2026-01-26 21:21:29,264 | INFO     | all data control threads have been joined
[2026-01-26 13:21:59] 2026-01-26 21:21:29,346 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:29,346 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:29,346 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:29,382 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:29,707 | INFO     | all payload control threads have been joined
[2026-01-26 13:21:59] 2026-01-26 21:21:29,823 | INFO     | all job control threads have been joined
[2026-01-26 13:21:59] 2026-01-26 21:21:29,843 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,193 | INFO     | [job] validate thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,219 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,230 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,269 | INFO     | [data] control thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:21:59] 2026-01-26 21:21:30,482 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,712 | INFO     | [payload] control thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,820 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,828 | INFO     | [job] control thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:30,908 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:31,070 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:34,293 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:21:59] 2026-01-26 21:21:53,781 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:21:59] 2026-01-26 21:21:54,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132946817230656)>', '<ExcThread(monitor, started 132946149242624)>']
[2026-01-26 13:21:59] 2026-01-26 21:21:58,860 | INFO     | PID=496761 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 13:21:59] 2026-01-26 21:21:58,860 | INFO     | .. there are 7 such processes running
[2026-01-26 13:21:59] 2026-01-26 21:21:58,861 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:21:59] 2026-01-26 21:21:58,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:21:59] 2026-01-26 21:21:58,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:21:59] 2026-01-26 21:21:58,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:21:59] 2026-01-26 21:21:58,861 | INFO     | [monitor] control thread has ended
[2026-01-26 13:21:59] 2026-01-26 21:21:59,657 | INFO     | all workflow threads have been joined
[2026-01-26 13:21:59] 2026-01-26 21:21:59,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:21:59] 2026-01-26 21:21:59,657 | INFO     | traces error code: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:59,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:21:59] 2026-01-26 21:21:59,713 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:21:59] 2026-01-26 21:21:59,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:21:59] 2026-01-26 21:21:59,715 [wrapper] pilotpid: 496761
[2026-01-26 13:21:59] 2026-01-26 21:21:59,719 [wrapper] Pilot exit status: 0
[2026-01-26 13:21:59] 2026-01-26 21:21:59,723 [wrapper] pandaids: 6983449236
[2026-01-26 13:21:59] 2026-01-26 21:21:59,742 [wrapper] cleanup supervisor_pilot  610018 496762
[2026-01-26 13:21:59] 2026-01-26 21:21:59,743 [wrapper] Test setup, not cleaning
[2026-01-26 13:21:59] 2026-01-26 21:21:59,744 [wrapper] apfmon messages muted
[2026-01-26 13:21:59] 2026-01-26 21:21:59,745 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:21:59] 2026-01-26 21:21:59,746 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:21:59]  *** Error codes and diagnostics ***
[2026-01-26 13:21:59]     "exeErrorCode": 0,
[2026-01-26 13:21:59]     "exeErrorDiag": "",
[2026-01-26 13:21:59]     "pilotErrorCode": 0,
[2026-01-26 13:21:59]     "pilotErrorDiag": "",
[2026-01-26 13:21:59]  *** Listing of results directory ***
[2026-01-26 13:21:59] total 412492
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc    584422 Jan 25 12:48 pilot3.tar.gz
[2026-01-26 13:21:59] -rwx------ 1 boinc boinc     36322 Jan 25 12:49 runpilot2-wrapper.sh
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc      5111 Jan 25 12:51 queuedata.json
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc       100 Jan 26 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:21:59] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 11:43 run_atlas
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc       105 Jan 26 11:43 job.xml
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc 247649531 Jan 26 11:43 EVNT.48298565._000013.pool.root.1
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc    597778 Jan 26 11:43 input.tar.gz
[2026-01-26 13:21:59] drwxrwx--x 2 boinc boinc      4096 Jan 26 11:43 shared
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:43 boinc_setup_complete
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:43 start_atlas.sh
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc     10205 Jan 26 11:43 init_data.xml
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:43 boinc_lockfile
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc      2614 Jan 26 11:43 pandaJob.out
[2026-01-26 13:21:59] -rw------- 1 boinc boinc   1006449 Jan 26 11:43 agis_schedconf.cvmfs.json
[2026-01-26 13:21:59] -rw------- 1 boinc boinc   1516246 Jan 26 11:43 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:21:59] -rw------- 1 boinc boinc       424 Jan 26 11:43 workernode_map.json
[2026-01-26 13:21:59] drwx------ 5 boinc boinc      4096 Jan 26 11:43 pilot3
[2026-01-26 13:21:59] -rw------- 1 boinc boinc 168497518 Jan 26 13:21 HITS.48298567._000306.pool.root.1
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc       529 Jan 26 13:21 boinc_task_state.xml
[2026-01-26 13:21:59] -rw------- 1 boinc boinc      1031 Jan 26 13:21 memory_monitor_summary.json
[2026-01-26 13:21:59] -rw------- 1 boinc boinc    276626 Jan 26 13:21 log.48298567._000306.job.log.tgz.1
[2026-01-26 13:21:59] -rw------- 1 boinc boinc      6305 Jan 26 13:21 heartbeat.json
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc      8192 Jan 26 13:21 boinc_mmap_file
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc        27 Jan 26 13:21 wrapper_checkpoint.txt
[2026-01-26 13:21:59] -rw------- 1 boinc boinc        95 Jan 26 13:21 pilot_heartbeat.json
[2026-01-26 13:21:59] -rw------- 1 boinc boinc      4827 Jan 26 13:21 pilotlog.txt
[2026-01-26 13:21:59] -rw------- 1 boinc boinc    869195 Jan 26 13:21 log.48298567._000306.job.log.1
[2026-01-26 13:21:59] -rw------- 1 boinc boinc       357 Jan 26 13:21 output.list
[2026-01-26 13:21:59] -rw------- 1 boinc boinc   1167360 Jan 26 13:21 result.tar.gz
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc       620 Jan 26 13:21 runtime_log
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc      8963 Jan 26 13:21 runtime_log.err
[2026-01-26 13:21:59] -rw------- 1 boinc boinc       661 Jan 26 13:21 Re7KDmKEM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOM8KDm6YQWem.diag
[2026-01-26 13:21:59] -rw-r--r-- 1 boinc boinc     21561 Jan 26 13:21 stderr.txt
[2026-01-26 13:21:59] HITS file was successfully produced:
[2026-01-26 13:21:59] -rw------- 1 boinc boinc 168497518 Jan 26 13:21 shared/HITS.pool.root.1
[2026-01-26 13:21:59]  *** Contents of shared directory: ***
[2026-01-26 13:21:59] total 408148
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc 247649531 Jan 26 11:43 ATLAS.root_0
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc    597778 Jan 26 11:43 input.tar.gz
[2026-01-26 13:21:59] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:43 start_atlas.sh
[2026-01-26 13:21:59] -rw------- 1 boinc boinc 168497518 Jan 26 13:21 HITS.pool.root.1
[2026-01-26 13:21:59] -rw------- 1 boinc boinc   1167360 Jan 26 13:21 result.tar.gz
13:22:00 (492529): run_atlas exited; CPU time 22498.260151
13:22:00 (492529): called boinc_finish(0)

</stderr_txt>
]]>

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