Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:11 (1948148): wrapper (7.7.26015): starting
16:28:11 (1948148): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 16:28:11] Arguments: --nthreads 4
[2026-01-27 16:28:11] Threads: 4
[2026-01-27 16:28:11] Checking for CVMFS
[2026-01-27 16:28:11] No cvmfs_config command found, will try listing directly
[2026-01-27 16:28:11] CVMFS is ok
[2026-01-27 16:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 16:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 16:28:11] Further information can be found at the LHC@home message board.
[2026-01-27 16:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 16:28:11] Checking for apptainer binary...
[2026-01-27 16:28:11] which: no apptainer in ((null))
[2026-01-27 16:28:11] apptainer is not installed, using version from CVMFS
[2026-01-27 16:28:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 16:28:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-01-27 16:28:11] apptainer works
[2026-01-27 16:28:11] Set ATHENA_PROC_NUMBER=4
[2026-01-27 16:28:11] Set ATHENA_CORE_NUMBER=4
[2026-01-27 16:28:11] Starting ATLAS job with PandaID=6983772390
[2026-01-27 16:28:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 19:58:09]  *** The last 200 lines of the pilot log: ***
[2026-01-27 19:58:09] 2026-01-27 18:49:00,366 | INFO     | time since job start (12030s) is within the limit (349056.0s)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,589 | INFO     | job 6983772390 has state=finished
[2026-01-27 19:58:09] 2026-01-27 18:49:00,590 | INFO     | preparing for final server update for job 6983772390 in state='finished'
[2026-01-27 19:58:09] 2026-01-27 18:49:00,590 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6983772390/jobReport.json
[2026-01-27 19:58:09] 2026-01-27 18:49:00,593 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-01-27 19:58:09] 2026-01-27 18:49:00,593 | INFO     | this job has now completed (state=finished)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,593 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,593 | INFO     | log transfer has been attempted: DONE
[2026-01-27 19:58:09] 2026-01-27 18:49:00,593 | INFO     | job 6983772390 has finished - writing final server update
[2026-01-27 19:58:09] 2026-01-27 18:49:00,594 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3494932/.job.ad'
[2026-01-27 19:58:09] 2026-01-27 18:49:00,594 | INFO     | total number of processed events: 400 (read)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,606 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6983772390/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,607 | INFO     | extracted standard info from prmon json
[2026-01-27 19:58:09] 2026-01-27 18:49:00,607 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 19:58:09] 2026-01-27 18:49:00,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 19:58:09] 2026-01-27 18:49:00,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 19:58:09] 2026-01-27 18:49:00,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 19:58:09] 2026-01-27 18:49:00,612 | INFO     | fitting pss+swap vs Time
[2026-01-27 19:58:09] 2026-01-27 18:49:00,612 | INFO     | sum of square deviations: 2370641658.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,613 | INFO     | sum of deviations: -4557449811.999998
[2026-01-27 19:58:09] 2026-01-27 18:49:00,613 | INFO     | mean x: 1769533711.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,613 | INFO     | mean y: 2345078.781725888
[2026-01-27 19:58:09] 2026-01-27 18:49:00,614 | INFO     | intersect: 3404192444.160559
[2026-01-27 19:58:09] 2026-01-27 18:49:00,614 | INFO     | chi2: 1.2713219355439092
[2026-01-27 19:58:09] 2026-01-27 18:49:00,614 | INFO     | sum of square deviations: 2194675568.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | sum of deviations: -4410255592.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | mean x: 1769533558.5
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | mean y: 2345205.3958333335
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | intersect: 3558267267.5884376
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | chi2: 1.2709162023030969
[2026-01-27 19:58:09] 2026-01-27 18:49:00,616 | INFO     | current chi2=1.2709162023030969 (change=0.0319142798899866 %)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,617 | INFO     | right removable region: 191
[2026-01-27 19:58:09] 2026-01-27 18:49:00,617 | INFO     | sum of square deviations: 2194675568.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,618 | INFO     | sum of deviations: -23494566904.49999
[2026-01-27 19:58:09] 2026-01-27 18:49:00,618 | INFO     | mean x: 1769533863.5
[2026-01-27 19:58:09] 2026-01-27 18:49:00,618 | INFO     | mean y: 2361162.8072916665
[2026-01-27 19:58:09] 2026-01-27 18:49:00,618 | INFO     | intersect: 18945676681.494976
[2026-01-27 19:58:09] 2026-01-27 18:49:00,619 | INFO     | chi2: 0.05859215389978802
[2026-01-27 19:58:09] 2026-01-27 18:49:00,619 | INFO     | current chi2=0.05859215389978802 (change=95.39124180416815 %)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,619 | INFO     | sum of square deviations: 2027639878.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,620 | INFO     | sum of deviations: -19051634314.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,620 | INFO     | mean x: 1769534016.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | mean y: 2357108.117647059
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | intersect: 16628837650.741806
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | chi2: 0.050737840144084966
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | current chi2=0.050737840144084966 (change=13.405060631729862 %)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | left removable region: 20
[2026-01-27 19:58:09] 2026-01-27 18:49:00,621 | INFO     | sum of square deviations: 1550429070.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,622 | INFO     | sum of deviations: -12662174856.999998
[2026-01-27 19:58:09] 2026-01-27 18:49:00,623 | INFO     | mean x: 1769534138.0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,623 | INFO     | mean y: 2351490.5730994153
[2026-01-27 19:58:09] 2026-01-27 18:49:00,623 | INFO     | intersect: 14453932091.281755
[2026-01-27 19:58:09] 2026-01-27 18:49:00,623 | INFO     | chi2: 0.0421876221768889
[2026-01-27 19:58:09] 2026-01-27 18:49:00,623 | INFO     | current memory leak: -8.17 B/s (using 171 data points, chi2=0.04)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | could have reported an average CPU frequency of 2604 MHz (10 samples)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | ..............................
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | . Timing measurements:
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | . get job = 0 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | . initial setup = 6 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,624 | INFO     | . payload setup = 6 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,626 | INFO     | . stage-in = 0 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,626 | INFO     | . payload execution = 12005 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,626 | INFO     | . stage-out = 1 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,626 | INFO     | . log creation = 0 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,626 | INFO     | ..............................
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | 
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | job summary report
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | --------------------------------------------------
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | PanDA job id: 6983772390
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | task id: 48317872
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | errors: (none)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | pilot state: finished 
[2026-01-27 19:58:09] 2026-01-27 18:49:00,720 | INFO     | transexitcode: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | exeerrorcode: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | exeerrordiag: 
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | exitcode: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | exitmsg: OK
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | cpuconsumptiontime: 46228 s
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | nevents: 400
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | neventsw: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | pid: 1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | pgrp: 1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | corecount: 4
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | event service: False
[2026-01-27 19:58:09] 2026-01-27 18:49:00,721 | INFO     | sizes: {0: 2283867, 1: 2284271, 11: 2284271, 12015: 2313821, 12017: 2322897, 12019: 2323035}
[2026-01-27 19:58:09] 2026-01-27 18:49:00,722 | INFO     | --------------------------------------------------
[2026-01-27 19:58:09] 2026-01-27 18:49:00,722 | INFO     | 
[2026-01-27 19:58:09] 2026-01-27 18:49:00,722 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-27 19:58:09] 2026-01-27 18:49:00,743 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,743 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | job 6983772390 has completed (purged errors)
[2026-01-27 19:58:09] 2026-01-27 18:49:00,745 | INFO     | overall cleanup function is called
[2026-01-27 19:58:09] 2026-01-27 18:49:01,750 | INFO     | --- collectZombieJob: --- 10, [1957047]
[2026-01-27 19:58:09] 2026-01-27 18:49:01,750 | INFO     | zombie collector waiting for pid 1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:01,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 19:58:09] 2026-01-27 18:49:01,750 | INFO     | collected zombie processes
[2026-01-27 19:58:09] 2026-01-27 18:49:01,751 | INFO     | will attempt to kill all subprocesses of pid=1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:02,155 | INFO     | process IDs to be killed: [1957047] (in reverse order)
[2026-01-27 19:58:09] 2026-01-27 18:49:02,286 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 19:58:09] 2026-01-27 18:49:02,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 19:58:09] 2026-01-27 18:49:02,300 | INFO     | did not find any defunct processes belonging to 1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:02,313 | INFO     | did not find any defunct processes belonging to 1957047
[2026-01-27 19:58:09] 2026-01-27 18:49:02,314 | INFO     | ready for new job
[2026-01-27 19:58:09] 2026-01-27 18:49:02,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 19:58:09] 2026-01-27 18:49:02,316 | INFO     | **************************************
[2026-01-27 19:58:09] 2026-01-27 18:49:02,316 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 19:58:09] 2026-01-27 18:49:02,316 | INFO     | **************************************
[2026-01-27 19:58:09] 2026-01-27 18:49:02,316 | INFO     | 
[2026-01-27 19:58:09] 2026-01-27 18:49:02,320 | INFO     | architecture information:
[2026-01-27 19:58:09] 2026-01-27 18:49:02,321 | INFO     | executing command: cat /etc/os-release
[2026-01-27 19:58:09] 2026-01-27 18:49:02,336 | INFO     | cat /etc/os-release:
[2026-01-27 19:58:09] NAME="CentOS Linux"
[2026-01-27 19:58:09] VERSION="7 (Core)"
[2026-01-27 19:58:09] ID="centos"
[2026-01-27 19:58:09] ID_LIKE="rhel fedora"
[2026-01-27 19:58:09] VERSION_ID="7"
[2026-01-27 19:58:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 19:58:09] ANSI_COLOR="0;31"
[2026-01-27 19:58:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 19:58:09] HOME_URL="https://www.centos.org/"
[2026-01-27 19:58:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 19:58:09] 
[2026-01-27 19:58:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 19:58:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 19:58:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 19:58:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 19:58:09] 
[2026-01-27 19:58:09] 2026-01-27 18:49:02,337 | INFO     | **************************************
[2026-01-27 19:58:09] 2026-01-27 18:49:02,840 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-27 19:58:09] 2026-01-27 18:49:02,859 | INFO     | sufficient remaining disk space (661599027200 B)
[2026-01-27 19:58:09] 2026-01-27 18:49:02,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 19:58:09] 2026-01-27 18:49:02,860 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 19:58:09] 2026-01-27 18:49:02,860 | INFO     | update_server=False
[2026-01-27 19:58:09] 2026-01-27 18:49:02,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 19:58:09] 2026-01-27 18:49:03,258 | INFO     | all job control threads have been joined
[2026-01-27 19:58:09] 2026-01-27 18:49:03,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:58:09] 2026-01-27 18:49:03,655 | INFO     | aborting loop
[2026-01-27 19:58:09] 2026-01-27 18:49:03,861 | INFO     | [job] retrieve thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:03,870 | INFO     | all data control threads have been joined
[2026-01-27 19:58:09] 2026-01-27 18:49:03,919 | INFO     | [data] copytool_in thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:03,956 | INFO     | [payload] failed_post thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,225 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,263 | INFO     | [job] control thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,332 | INFO     | [payload] validate_post thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,351 | INFO     | all payload control threads have been joined
[2026-01-27 19:58:09] 2026-01-27 18:49:04,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 19:58:09] 2026-01-27 18:49:04,552 | INFO     | [job] validate thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,661 | INFO     | [job] job monitor thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,842 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:04,875 | INFO     | [data] control thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:05,155 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:05,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 19:58:09] 2026-01-27 18:49:05,322 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:05,356 | INFO     | [payload] control thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:05,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:58:09] 2026-01-27 18:49:06,357 | INFO     | [data] copytool_out thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:06,726 | INFO     | [job] queue monitor thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:09,253 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 19:58:09] 2026-01-27 18:49:33,950 | INFO     | PID=1952323 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 19:58:09] 2026-01-27 18:49:33,950 | INFO     | .. there are 5 such processes running
[2026-01-27 19:58:09] 2026-01-27 18:49:33,950 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 19:58:09] 2026-01-27 18:49:33,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 19:58:09] 2026-01-27 18:49:33,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 19:58:09] 2026-01-27 18:49:49,888 | INFO     | [monitor] cgroup control has ended
[2026-01-27 19:58:09] 2026-01-27 18:49:50,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23346903107392)>', '<ExcThread(monitor, started 23346665502464)>']
[2026-01-27 19:58:09] 2026-01-27 18:49:51,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 19:58:09] 2026-01-27 18:49:51,036 | INFO     | [monitor] control thread has ended
[2026-01-27 19:58:09] 2026-01-27 18:49:55,416 | INFO     | all workflow threads have been joined
[2026-01-27 19:58:09] 2026-01-27 18:49:55,416 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 19:58:09] 2026-01-27 18:49:55,416 | INFO     | traces error code: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:55,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 19:58:09] 2026-01-27 18:49:55,575 [wrapper] ==== pilot stdout END ====
[2026-01-27 19:58:09] 2026-01-27 18:49:55,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 19:58:09] 2026-01-27 18:49:55,580 [wrapper] pilotpid: 1952323
[2026-01-27 19:58:09] 2026-01-27 18:49:55,583 [wrapper] Pilot exit status: 0
[2026-01-27 19:58:09] 2026-01-27 18:49:55,594 [wrapper] pandaids: 6983772390
[2026-01-27 19:58:09] 2026-01-27 18:49:55,674 [wrapper] cleanup supervisor_pilot 2101661 1952324
[2026-01-27 19:58:09] 2026-01-27 18:49:55,677 [wrapper] Test setup, not cleaning
[2026-01-27 19:58:09] 2026-01-27 18:49:55,680 [wrapper] apfmon messages muted
[2026-01-27 19:58:09] 2026-01-27 18:49:55,683 [wrapper] ==== wrapper stdout END ====
[2026-01-27 19:58:09] 2026-01-27 18:49:55,685 [wrapper] ==== wrapper stderr END ====
[2026-01-27 19:58:09]  *** Error codes and diagnostics ***
[2026-01-27 19:58:09]     "exeErrorCode": 0,
[2026-01-27 19:58:09]     "exeErrorDiag": "",
[2026-01-27 19:58:09]     "pilotErrorCode": 0,
[2026-01-27 19:58:09]     "pilotErrorDiag": "",
[2026-01-27 19:58:09]  *** Listing of results directory ***
[2026-01-27 19:58:09] total 673924
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-27 19:58:09] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc       100 Jan 27 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 19:58:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 16:28 run_atlas
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc       105 Jan 27 16:28 job.xml
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc 494221727 Jan 27 16:28 EVNT.48317869._000033.pool.root.1
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc      6639 Jan 27 16:28 init_data.xml
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:28 start_atlas.sh
[2026-01-27 19:58:09] drwxrwx--x 2 boinc boinc      4096 Jan 27 16:28 shared
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc    597750 Jan 27 16:28 input.tar.gz
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc         0 Jan 27 16:28 boinc_lockfile
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc      2514 Jan 27 16:28 pandaJob.out
[2026-01-27 19:58:09] -rw------- 1 boinc boinc   1005162 Jan 27 16:28 agis_schedconf.cvmfs.json
[2026-01-27 19:58:09] -rw------- 1 boinc boinc       452 Jan 27 16:28 workernode_map.json
[2026-01-27 19:58:09] drwx------ 5 boinc boinc      4096 Jan 27 16:28 pilot3
[2026-01-27 19:58:09] -rw------- 1 boinc boinc 187751034 Jan 27 19:48 HITS.48317872._001645.pool.root.1
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc       529 Jan 27 19:48 boinc_task_state.xml
[2026-01-27 19:58:09] -rw------- 1 boinc boinc        95 Jan 27 19:48 pilot_heartbeat.json
[2026-01-27 19:58:09] -rw------- 1 boinc boinc      1037 Jan 27 19:48 memory_monitor_summary.json
[2026-01-27 19:58:09] -rw------- 1 boinc boinc   1516246 Jan 27 19:48 agis_ddmendpoints.agis.ALL.json
[2026-01-27 19:58:09] -rw------- 1 boinc boinc    396985 Jan 27 19:48 log.48317872._001645.job.log.tgz.1
[2026-01-27 19:58:09] -rw------- 1 boinc boinc      6412 Jan 27 19:49 heartbeat.json
[2026-01-27 19:58:09] -rw------- 1 boinc boinc      4829 Jan 27 19:49 pilotlog.txt
[2026-01-27 19:58:09] -rw------- 1 boinc boinc   1698025 Jan 27 19:49 log.48317872._001645.job.log.1
[2026-01-27 19:58:09] -rw------- 1 boinc boinc       357 Jan 27 19:49 output.list
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc       620 Jan 27 19:49 runtime_log
[2026-01-27 19:58:09] -rw------- 1 boinc boinc   2109440 Jan 27 19:49 result.tar.gz
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc      9205 Jan 27 19:49 runtime_log.err
[2026-01-27 19:58:09] -rw------- 1 boinc boinc       665 Jan 27 19:49 19XKDmmHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWs8KDmhppUHo.diag
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc      8192 Jan 27 19:58 boinc_mmap_file
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc        26 Jan 27 19:58 wrapper_checkpoint.txt
[2026-01-27 19:58:09] -rw-r--r-- 1 boinc boinc     21123 Jan 27 19:58 stderr.txt
[2026-01-27 19:58:09] HITS file was successfully produced:
[2026-01-27 19:58:09] -rw------- 1 boinc boinc 187751034 Jan 27 19:48 shared/HITS.pool.root.1
[2026-01-27 19:58:09]  *** Contents of shared directory: ***
[2026-01-27 19:58:09] total 668660
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc 494221727 Jan 27 16:28 ATLAS.root_0
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:28 start_atlas.sh
[2026-01-27 19:58:09] -rw-r--r-- 2 boinc boinc    597750 Jan 27 16:28 input.tar.gz
[2026-01-27 19:58:09] -rw------- 1 boinc boinc 187751034 Jan 27 19:48 HITS.pool.root.1
[2026-01-27 19:58:09] -rw------- 1 boinc boinc   2109440 Jan 27 19:49 result.tar.gz
19:58:11 (1948148): run_atlas exited; CPU time 46793.302243
19:58:11 (1948148): called boinc_finish(0)

</stderr_txt>
]]>

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