Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:32:12 (828831): wrapper (7.7.26015): starting
14:32:12 (828831): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 14:32:12] Arguments: --nthreads 8
[2026-01-26 14:32:12] Threads: 8
[2026-01-26 14:32:12] Checking for CVMFS
[2026-01-26 14:32:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 14:32:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 14:32:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 14:32:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 14:32:14] 2.13.3.0 12357 118267 240060 155559 3 354 25474490 32503808 58758 16776704 0 1609405488 99.601 1634521299 48386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 14:32:14] CVMFS is ok
[2026-01-26 14:32:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 14:32:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 14:32:14] Further information can be found at the LHC@home message board.
[2026-01-26 14:32:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 14:32:14] Checking for apptainer binary...
[2026-01-26 14:32:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 14:32:14] Running /usr/bin/apptainer --version
[2026-01-26 14:32:14] apptainer version 1.4.5-2.el9
[2026-01-26 14:32:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 14:32:14] c8-7-2.aglt2.org
[2026-01-26 14:32:14] apptainer works
[2026-01-26 14:32:14] Set ATHENA_PROC_NUMBER=8
[2026-01-26 14:32:14] Set ATHENA_CORE_NUMBER=8
[2026-01-26 14:32:14] Starting ATLAS job with PandaID=6983344311
[2026-01-26 14:32:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:20:11 (828831): BOINC client no longer exists - exiting
15:20:11 (828831): timer handler: client dead, exiting
15:21:30 (1743253): wrapper (7.7.26015): starting
15:21:30 (1743253): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 15:21:30] Arguments: --nthreads 8
[2026-01-26 15:21:30] Threads: 8
[2026-01-26 15:21:30] This job has been restarted, cleaning up previous attempt
[2026-01-26 15:21:30] Checking for CVMFS
[2026-01-26 15:21:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:21:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:21:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:21:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:21:31] 2.13.3.0 12357 118316 236496 155561 2 377 29862209 32503809 56240 16776704 0 1611033352 99.601 1635781521 48377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 15:21:31] CVMFS is ok
[2026-01-26 15:21:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 15:21:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 15:21:31] Further information can be found at the LHC@home message board.
[2026-01-26 15:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:21:31] Checking for apptainer binary...
[2026-01-26 15:21:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:21:31] Running /usr/bin/apptainer --version
[2026-01-26 15:21:31] apptainer version 1.4.5-2.el9
[2026-01-26 15:21:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:21:31] c8-7-2.aglt2.org
[2026-01-26 15:21:31] apptainer works
[2026-01-26 15:21:32] Set ATHENA_PROC_NUMBER=8
[2026-01-26 15:21:32] Set ATHENA_CORE_NUMBER=8
[2026-01-26 15:21:32] Starting ATLAS job with PandaID=6983344311
[2026-01-26 15:21:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:06:11]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:06:11] 2026-01-26 23:05:31,599 | INFO     | job 6983344311 has finished - writing final server update
[2026-01-26 18:06:11] 2026-01-26 23:05:31,599 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,619 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6983344311/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,620 | INFO     | extracted standard info from prmon json
[2026-01-26 18:06:11] 2026-01-26 23:05:31,634 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:06:11] 2026-01-26 23:05:31,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:06:11] 2026-01-26 23:05:31,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:06:11] 2026-01-26 23:05:31,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | sum of square deviations: 1294014229.9751482
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | sum of deviations: 7858787478.857143
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | mean x: 1769463816.0124223
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | mean y: 2479204.5714285714
[2026-01-26 18:06:11] 2026-01-26 23:05:31,636 | INFO     | intersect: -10743801446.32703
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | chi2: 1.8534788620844962
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | sum of square deviations: 1177156834.974362
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | sum of deviations: 17509242145.897434
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | mean x: 1769463663.5128205
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | mean y: 2491469.5512820515
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | intersect: -26316828804.783726
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | chi2: 1.1677715918454206
[2026-01-26 18:06:11] 2026-01-26 23:05:31,637 | INFO     | current chi2=1.1677715918454206 (change=36.995688716293316 %)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,638 | INFO     | sum of square deviations: 1067555389.9735115
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | sum of deviations: 16956648588.178812
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | mean x: 1769463511.013245
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | mean y: 2490700.4105960266
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | intersect: -28103002679.75129
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | chi2: 1.1686322619120968
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | current chi2=1.1686322619120968 (change=-0.07370191848185977 %)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | right removable region: 150
[2026-01-26 18:06:11] 2026-01-26 23:05:31,650 | INFO     | sum of square deviations: 1177155614.974362
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | sum of deviations: -11515275741.102566
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | mean x: 1769463968.5128205
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | mean y: 2504070.3012820515
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | intersect: 17311910959.393456
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | chi2: 0.7061566984364918
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | current chi2=0.7061566984364918 (change=61.90101150426287 %)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,651 | INFO     | sum of square deviations: 1067552949.9735115
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | sum of deviations: -11753623493.7351
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | mean x: 1769464121.013245
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | mean y: 2504396.867549669
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | intersect: 19484081460.16792
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | chi2: 0.7054787884713482
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | current chi2=0.7054787884713482 (change=0.09599993410026063 %)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | left removable region: 20
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | sum of square deviations: 681210944.4692303
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | sum of deviations: -1971714822.1307693
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | mean x: 1769464090.5153847
[2026-01-26 18:06:11] 2026-01-26 23:05:31,652 | INFO     | mean y: 2518425.315384615
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | intersect: 5124101692.324852
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | chi2: 0.001684252204433409
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | current memory leak: -2.89 B/s (using 130 data points, chi2=0.00)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | ..............................
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . Timing measurements:
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . get job = 0 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . initial setup = 1 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . payload setup = 9 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . stage-in = 0 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . payload execution = 9796 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . stage-out = 3 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | . log creation = 1 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,653 | INFO     | ..............................
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | 
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | job summary report
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | --------------------------------------------------
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | PanDA job id: 6983344311
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | task id: 48317872
[2026-01-26 18:06:11] 2026-01-26 23:05:31,962 | INFO     | errors: (none)
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | pilot state: finished 
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | transexitcode: 0
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | exeerrorcode: 0
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | exeerrordiag: 
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | exitcode: 0
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | exitmsg: OK
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | cpuconsumptiontime: 22874 s
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | nevents: 400
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | neventsw: 0
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | pid: 1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | pgrp: 1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | corecount: 8
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | event service: False
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | sizes: {0: 2284228, 11: 2284228, 9809: 2312788, 9810: 2312787, 9815: 2321897, 9816: 2322099}
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | --------------------------------------------------
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | 
[2026-01-26 18:06:11] 2026-01-26 23:05:31,963 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-01-26 18:06:11] 2026-01-26 23:05:32,124 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | job 6983344311 has completed (purged errors)
[2026-01-26 18:06:11] 2026-01-26 23:05:32,125 | INFO     | overall cleanup function is called
[2026-01-26 18:06:11] 2026-01-26 23:05:33,268 | INFO     | --- collectZombieJob: --- 10, [1804647]
[2026-01-26 18:06:11] 2026-01-26 23:05:33,268 | INFO     | zombie collector waiting for pid 1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:33,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:06:11] 2026-01-26 23:05:33,268 | INFO     | collected zombie processes
[2026-01-26 18:06:11] 2026-01-26 23:05:33,268 | INFO     | will attempt to kill all subprocesses of pid=1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:34,669 | INFO     | PID=1778976 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 18:06:11] 2026-01-26 23:05:34,669 | INFO     | .. there are 74 such processes running
[2026-01-26 18:06:11] 2026-01-26 23:05:36,335 | INFO     | process IDs to be killed: [1804647] (in reverse order)
[2026-01-26 18:06:11] 2026-01-26 23:05:36,680 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:06:11] 2026-01-26 23:05:36,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:06:11] 2026-01-26 23:05:36,715 | INFO     | did not find any defunct processes belonging to 1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:36,749 | INFO     | did not find any defunct processes belonging to 1804647
[2026-01-26 18:06:11] 2026-01-26 23:05:36,750 | INFO     | ready for new job
[2026-01-26 18:06:11] 2026-01-26 23:05:36,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:06:11] 2026-01-26 23:05:36,752 | INFO     | **************************************
[2026-01-26 18:06:11] 2026-01-26 23:05:36,752 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:06:11] 2026-01-26 23:05:36,752 | INFO     | **************************************
[2026-01-26 18:06:11] 2026-01-26 23:05:36,752 | INFO     | 
[2026-01-26 18:06:11] 2026-01-26 23:05:36,773 | INFO     | architecture information:
[2026-01-26 18:06:11] 2026-01-26 23:05:36,783 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:06:11] 2026-01-26 23:05:36,895 | INFO     | cat /etc/os-release:
[2026-01-26 18:06:11] NAME="CentOS Linux"
[2026-01-26 18:06:11] VERSION="7 (Core)"
[2026-01-26 18:06:11] ID="centos"
[2026-01-26 18:06:11] ID_LIKE="rhel fedora"
[2026-01-26 18:06:11] VERSION_ID="7"
[2026-01-26 18:06:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:06:11] ANSI_COLOR="0;31"
[2026-01-26 18:06:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:06:11] HOME_URL="https://www.centos.org/"
[2026-01-26 18:06:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:06:11] 
[2026-01-26 18:06:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:06:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:06:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:06:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:06:11] 
[2026-01-26 18:06:11] 2026-01-26 23:05:36,895 | INFO     | **************************************
[2026-01-26 18:06:11] 2026-01-26 23:05:37,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | INFO     | sufficient remaining disk space (87841308672 B)
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | INFO     | update_server=False
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:06:11] 2026-01-26 23:05:37,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:06:11] 2026-01-26 23:05:37,586 | INFO     | all job control threads have been joined
[2026-01-26 18:06:11] 2026-01-26 23:05:38,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:06:11] 2026-01-26 23:05:38,263 | INFO     | aborting loop
[2026-01-26 18:06:11] 2026-01-26 23:05:38,282 | INFO     | all data control threads have been joined
[2026-01-26 18:06:11] 2026-01-26 23:05:38,536 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,536 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,550 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,594 | INFO     | [job] control thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,638 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,638 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:38,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:06:11] 2026-01-26 23:05:38,730 | INFO     | all payload control threads have been joined
[2026-01-26 18:06:11] 2026-01-26 23:05:39,288 | INFO     | [data] control thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,300 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,670 | INFO     | [job] validate thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,670 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,736 | INFO     | [payload] control thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,856 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:39,917 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:40,650 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:05:41,557 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:06:11] 2026-01-26 23:06:02,074 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:06:11] 2026-01-26 23:06:03,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792364037952)>', '<ExcThread(monitor, started 139791647631104)>']
[2026-01-26 18:06:11] 2026-01-26 23:06:08,247 | INFO     | all workflow threads have been joined
[2026-01-26 18:06:11] 2026-01-26 23:06:08,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:06:11] 2026-01-26 23:06:08,247 | INFO     | traces error code: 0
[2026-01-26 18:06:11] 2026-01-26 23:06:08,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:06:11] 2026-01-26 23:06:09,804 | INFO     | PID=1778976 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | INFO     | .. there are 73 such processes running
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:06:11] 2026-01-26 23:06:09,805 | INFO     | [monitor] control thread has ended
[2026-01-26 18:06:11] 2026-01-26 23:06:09,980 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:06:11] 2026-01-26 23:06:10,013 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:06:11] 2026-01-26 23:06:10,057 [wrapper] pilotpid: 1778976
[2026-01-26 18:06:11] 2026-01-26 23:06:10,233 [wrapper] Pilot exit status: 0
[2026-01-26 18:06:11] 2026-01-26 23:06:10,376 [wrapper] pandaids: 6983344311 6983344311
[2026-01-26 18:06:11] 2026-01-26 23:06:10,627 [wrapper] cleanup supervisor_pilot 4025525 1778979
[2026-01-26 18:06:11] 2026-01-26 23:06:10,651 [wrapper] Test setup, not cleaning
[2026-01-26 18:06:11] 2026-01-26 23:06:10,689 [wrapper] apfmon messages muted
[2026-01-26 18:06:11] 2026-01-26 23:06:10,721 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:06:11] 2026-01-26 23:06:10,786 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:06:11]  *** Error codes and diagnostics ***
[2026-01-26 18:06:11]     "exeErrorCode": 0,
[2026-01-26 18:06:11]     "exeErrorDiag": "",
[2026-01-26 18:06:11]     "pilotErrorCode": 0,
[2026-01-26 18:06:11]     "pilotErrorDiag": "",
[2026-01-26 18:06:11]  *** Listing of results directory ***
[2026-01-26 18:06:11] total 1164860
[2026-01-26 18:06:11] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 13:47 pilot3.tar.gz
[2026-01-26 18:06:11] -rwx------. 1 boincer umatlas     36322 Jan 25 13:52 runpilot2-wrapper.sh
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 13:56 queuedata.json
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas       100 Jan 26 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:06:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 14:32 run_atlas
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas       105 Jan 26 14:32 job.xml
[2026-01-26 18:06:11] -rw-r--r--. 3 boincer umatlas 499948440 Jan 26 14:32 EVNT.48317869._000012.pool.root.1
[2026-01-26 18:06:11] -rw-r--r--. 3 boincer umatlas 499948440 Jan 26 14:32 ATLAS.root_0
[2026-01-26 18:06:11] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 14:32 start_atlas.sh
[2026-01-26 18:06:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 14:32 shared
[2026-01-26 18:06:11] -rw-r--r--. 2 boincer umatlas    597749 Jan 26 14:32 input.tar.gz
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas         0 Jan 26 14:32 boinc_lockfile
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas      2512 Jan 26 15:21 pandaJob.out
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas        57 Jan 26 15:21 setup.sh.local
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas   1006457 Jan 26 15:21 agis_schedconf.cvmfs.json
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas       430 Jan 26 15:21 workernode_map.json
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas      7171 Jan 26 18:03 init_data.xml
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas 185747706 Jan 26 18:04 HITS.48317872._000593.pool.root.1
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas       531 Jan 26 18:04 boinc_task_state.xml
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas      1048 Jan 26 18:05 memory_monitor_summary.json
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas   1516246 Jan 26 18:05 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas    416636 Jan 26 18:05 log.48317872._000593.job.log.tgz.1
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas      6343 Jan 26 18:05 heartbeat.json
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 18:06 boinc_mmap_file
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas        28 Jan 26 18:06 wrapper_checkpoint.txt
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas       823 Jan 26 18:06 pilotlog.txt
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas        95 Jan 26 18:06 pilot_heartbeat.json
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas   1196090 Jan 26 18:06 log.48317872._000593.job.log.1
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas       357 Jan 26 18:06 output.list
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas       620 Jan 26 18:06 runtime_log
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas   1628160 Jan 26 18:06 result.tar.gz
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas      9416 Jan 26 18:06 runtime_log.err
[2026-01-26 18:06:11] -rw-------. 1 boincer umatlas       779 Jan 26 18:06 CMeLDmVOK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGe1KDmzBAP4n.diag
[2026-01-26 18:06:11] -rw-r--r--. 1 boincer umatlas     23509 Jan 26 18:06 stderr.txt
[2026-01-26 18:06:12] HITS file was successfully produced:
[2026-01-26 18:06:12] -rw-------. 1 boincer umatlas 185747706 Jan 26 18:04 shared/HITS.pool.root.1
[2026-01-26 18:06:12]  *** Contents of shared directory: ***
[2026-01-26 18:06:12] total 671828
[2026-01-26 18:06:12] -rw-r--r--. 3 boincer umatlas 499948440 Jan 26 14:32 ATLAS.root_0
[2026-01-26 18:06:12] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 14:32 start_atlas.sh
[2026-01-26 18:06:12] -rw-r--r--. 2 boincer umatlas    597749 Jan 26 14:32 input.tar.gz
[2026-01-26 18:06:12] -rw-------. 1 boincer umatlas 185747706 Jan 26 18:04 HITS.pool.root.1
[2026-01-26 18:06:12] -rw-------. 1 boincer umatlas   1628160 Jan 26 18:06 result.tar.gz
18:06:13 (1743253): run_atlas exited; CPU time 23237.226184
18:06:13 (1743253): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN