Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:12:09 (4162741): wrapper (7.7.26015): starting
14:12:09 (4162741): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 14:12:09] Arguments: --nthreads 9
[2026-01-26 14:12:09] Threads: 9
[2026-01-26 14:12:09] Checking for CVMFS
[2026-01-26 14:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 14:12:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 14:12:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 14:12:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 14:12:10] 2.13.3.0 8207 45961 198780 155557 2 247 26818464 40960001 10745 16776704 0 28176246 99.684 25184629 35240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 14:12:10] CVMFS is ok
[2026-01-26 14:12:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 14:12:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 14:12:10] Further information can be found at the LHC@home message board.
[2026-01-26 14:12:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 14:12:10] Checking for apptainer binary...
[2026-01-26 14:12:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 14:12:10] Running /usr/bin/apptainer --version
[2026-01-26 14:12:10] apptainer version 1.4.5-2.el9
[2026-01-26 14:12:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 14:12:10] c-211-11.aglt2.org
[2026-01-26 14:12:10] apptainer works
[2026-01-26 14:12:10] Set ATHENA_PROC_NUMBER=9
[2026-01-26 14:12:10] Set ATHENA_CORE_NUMBER=9
[2026-01-26 14:12:10] Starting ATLAS job with PandaID=6983344862
[2026-01-26 14:12:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:20:05]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:20:05] 2026-01-27 04:19:30,780 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,806 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983344862/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,807 | INFO     | extracted standard info from prmon json
[2026-01-26 23:20:05] 2026-01-27 04:19:30,807 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:20:05] 2026-01-27 04:19:30,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:20:05] 2026-01-27 04:19:30,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:20:05] 2026-01-27 04:19:30,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:20:05] 2026-01-27 04:19:30,818 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:20:05] 2026-01-27 04:19:30,819 | INFO     | sum of square deviations: 48021123070.681564
[2026-01-26 23:20:05] 2026-01-27 04:19:30,828 | INFO     | sum of deviations: 41272961142.34642
[2026-01-26 23:20:05] 2026-01-27 04:19:30,828 | INFO     | mean x: 1769471188.2905028
[2026-01-26 23:20:05] 2026-01-27 04:19:30,828 | INFO     | mean y: 2548169.420856611
[2026-01-26 23:20:05] 2026-01-27 04:19:30,829 | INFO     | intersect: -1518268315.6355584
[2026-01-26 23:20:05] 2026-01-27 04:19:30,829 | INFO     | chi2: 3.743405909347287
[2026-01-26 23:20:05] 2026-01-27 04:19:30,830 | INFO     | sum of square deviations: 46692444367.47932
[2026-01-26 23:20:05] 2026-01-27 04:19:30,839 | INFO     | sum of deviations: 113148218330.25002
[2026-01-26 23:20:05] 2026-01-27 04:19:30,839 | INFO     | mean x: 1769471035.7988722
[2026-01-26 23:20:05] 2026-01-27 04:19:30,839 | INFO     | mean y: 2556372.75
[2026-01-26 23:20:05] 2026-01-27 04:19:30,839 | INFO     | intersect: -4285342832.3528676
[2026-01-26 23:20:05] 2026-01-27 04:19:30,840 | INFO     | chi2: 2.2395528977737724
[2026-01-26 23:20:05] 2026-01-27 04:19:30,840 | INFO     | current chi2=2.2395528977737724 (change=40.1733888333721 %)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,841 | INFO     | sum of square deviations: 45388445047.423195
[2026-01-26 23:20:05] 2026-01-27 04:19:30,849 | INFO     | sum of deviations: 111970931177.0873
[2026-01-26 23:20:05] 2026-01-27 04:19:30,850 | INFO     | mean x: 1769470883.3036053
[2026-01-26 23:20:05] 2026-01-27 04:19:30,850 | INFO     | mean y: 2556235.111954459
[2026-01-26 23:20:05] 2026-01-27 04:19:30,850 | INFO     | intersect: -4362636321.875545
[2026-01-26 23:20:05] 2026-01-27 04:19:30,851 | INFO     | chi2: 2.239872715327319
[2026-01-26 23:20:05] 2026-01-27 04:19:30,851 | INFO     | current chi2=2.239872715327319 (change=-0.014280419715215927 %)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,851 | INFO     | right removable region: 526
[2026-01-26 23:20:05] 2026-01-27 04:19:30,852 | INFO     | sum of square deviations: 46692086782.27643
[2026-01-26 23:20:05] 2026-01-27 04:19:30,860 | INFO     | sum of deviations: -76923915737.1842
[2026-01-26 23:20:05] 2026-01-27 04:19:30,861 | INFO     | mean x: 1769471340.8026316
[2026-01-26 23:20:05] 2026-01-27 04:19:30,861 | INFO     | mean y: 2561693.8458646615
[2026-01-26 23:20:05] 2026-01-27 04:19:30,861 | INFO     | intersect: 2917716566.9609156
[2026-01-26 23:20:05] 2026-01-27 04:19:30,862 | INFO     | chi2: 1.6262881118079817
[2026-01-26 23:20:05] 2026-01-27 04:19:30,862 | INFO     | current chi2=1.6262881118079817 (change=56.55592390482851 %)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,863 | INFO     | sum of square deviations: 45387827475.33957
[2026-01-26 23:20:05] 2026-01-27 04:19:30,873 | INFO     | sum of deviations: -74652901715.4668
[2026-01-26 23:20:05] 2026-01-27 04:19:30,873 | INFO     | mean x: 1769471493.313093
[2026-01-26 23:20:05] 2026-01-27 04:19:30,873 | INFO     | mean y: 2561416.8937381404
[2026-01-26 23:20:05] 2026-01-27 04:19:30,873 | INFO     | intersect: 2912949263.732056
[2026-01-26 23:20:05] 2026-01-27 04:19:30,874 | INFO     | chi2: 1.5873064702492252
[2026-01-26 23:20:05] 2026-01-27 04:19:30,874 | INFO     | current chi2=1.5873064702492252 (change=2.3969702093818857 %)
[2026-01-26 23:20:05] 2026-01-27 04:19:30,874 | INFO     | left removable region: 20
[2026-01-26 23:20:05] 2026-01-27 04:19:30,875 | INFO     | sum of square deviations: 40175476240.585014
[2026-01-26 23:20:05] 2026-01-27 04:19:30,924 | INFO     | sum of deviations: 8137927736.687735
[2026-01-26 23:20:05] 2026-01-27 04:19:30,925 | INFO     | mean x: 1769471462.8498023
[2026-01-26 23:20:05] 2026-01-27 04:19:30,925 | INFO     | mean y: 2568511.377470356
[2026-01-26 23:20:05] 2026-01-27 04:19:30,925 | INFO     | intersect: -355854891.26177967
[2026-01-26 23:20:05] 2026-01-27 04:19:30,926 | INFO     | chi2: 0.004124691637588584
[2026-01-26 23:20:05] 2026-01-27 04:19:30,926 | INFO     | current memory leak: 0.20 B/s (using 506 data points, chi2=0.00)
[2026-01-26 23:20:05] 2026-01-27 04:19:31,002 | INFO     | could have reported an average CPU frequency of 2588 MHz (22 samples)
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | ..............................
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . Timing measurements:
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . get job = 0 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . initial setup = 29 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . payload setup = 39 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . stage-in = 0 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . payload execution = 32745 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,003 | INFO     | . stage-out = 6 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,004 | INFO     | . log creation = 2 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,004 | INFO     | ..............................
[2026-01-26 23:20:05] 2026-01-27 04:19:31,423 | INFO     | 
[2026-01-26 23:20:05] 2026-01-27 04:19:31,423 | INFO     | job summary report
[2026-01-26 23:20:05] 2026-01-27 04:19:31,423 | INFO     | --------------------------------------------------
[2026-01-26 23:20:05] 2026-01-27 04:19:31,423 | INFO     | PanDA job id: 6983344862
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | task id: 48317872
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | errors: (none)
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | pilot state: finished 
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | transexitcode: 0
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | exeerrorcode: 0
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | exeerrordiag: 
[2026-01-26 23:20:05] 2026-01-27 04:19:31,424 | INFO     | exitcode: 0
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | exitmsg: OK
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | cpuconsumptiontime: 54444 s
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | nevents: 400
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | neventsw: 0
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | pid: 4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | pgrp: 4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | corecount: 9
[2026-01-26 23:20:05] 2026-01-27 04:19:31,425 | INFO     | event service: False
[2026-01-26 23:20:05] 2026-01-27 04:19:31,426 | INFO     | sizes: {0: 2283138, 1: 2283823, 2: 2283823, 3: 2284312, 32790: 2323154, 32797: 2332152, 32798: 2332336, 32799: 2332530}
[2026-01-26 23:20:05] 2026-01-27 04:19:31,426 | INFO     | --------------------------------------------------
[2026-01-26 23:20:05] 2026-01-27 04:19:31,426 | INFO     | 
[2026-01-26 23:20:05] 2026-01-27 04:19:31,426 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 23:20:05] 2026-01-27 04:19:31,621 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:20:05] 2026-01-27 04:19:31,624 | INFO     | job 6983344862 has completed (purged errors)
[2026-01-26 23:20:05] 2026-01-27 04:19:31,625 | INFO     | overall cleanup function is called
[2026-01-26 23:20:05] 2026-01-27 04:19:31,764 | INFO     | number of running child processes to parent process 4172945: 1
[2026-01-26 23:20:05] 2026-01-27 04:19:31,765 | INFO     | maximum number of monitored processes: 6
[2026-01-26 23:20:05] 2026-01-27 04:19:31,765 | INFO     | aborting job monitoring since job object (job id=6983344862) has expired
[2026-01-26 23:20:05] 2026-01-27 04:19:32,639 | INFO     | --- collectZombieJob: --- 10, [4172945]
[2026-01-26 23:20:05] 2026-01-27 04:19:32,639 | INFO     | zombie collector waiting for pid 4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:32,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:20:05] 2026-01-27 04:19:32,640 | INFO     | collected zombie processes
[2026-01-26 23:20:05] 2026-01-27 04:19:32,640 | INFO     | will attempt to kill all subprocesses of pid=4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:33,238 | INFO     | process IDs to be killed: [4172945] (in reverse order)
[2026-01-26 23:20:05] 2026-01-27 04:19:33,611 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:20:05] 2026-01-27 04:19:33,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:20:05] 2026-01-27 04:19:33,628 | INFO     | did not find any defunct processes belonging to 4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:33,644 | INFO     | did not find any defunct processes belonging to 4172945
[2026-01-26 23:20:05] 2026-01-27 04:19:33,645 | INFO     | ready for new job
[2026-01-26 23:20:05] 2026-01-27 04:19:33,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:20:05] 2026-01-27 04:19:33,652 | INFO     | **************************************
[2026-01-26 23:20:05] 2026-01-27 04:19:33,652 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:20:05] 2026-01-27 04:19:33,652 | INFO     | **************************************
[2026-01-26 23:20:05] 2026-01-27 04:19:33,652 | INFO     | 
[2026-01-26 23:20:05] 2026-01-27 04:19:33,658 | INFO     | architecture information:
[2026-01-26 23:20:05] 2026-01-27 04:19:33,660 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:20:05] 2026-01-27 04:19:33,847 | INFO     | cat /etc/os-release:
[2026-01-26 23:20:05] NAME="CentOS Linux"
[2026-01-26 23:20:05] VERSION="7 (Core)"
[2026-01-26 23:20:05] ID="centos"
[2026-01-26 23:20:05] ID_LIKE="rhel fedora"
[2026-01-26 23:20:05] VERSION_ID="7"
[2026-01-26 23:20:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:20:05] ANSI_COLOR="0;31"
[2026-01-26 23:20:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:20:05] HOME_URL="https://www.centos.org/"
[2026-01-26 23:20:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:20:05] 
[2026-01-26 23:20:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:20:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:20:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:20:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:20:05] 
[2026-01-26 23:20:05] 2026-01-27 04:19:33,848 | INFO     | **************************************
[2026-01-26 23:20:05] 2026-01-27 04:19:34,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 23:20:05] 2026-01-27 04:19:34,545 | INFO     | sufficient remaining disk space (61835575296 B)
[2026-01-26 23:20:05] 2026-01-27 04:19:34,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:20:05] 2026-01-27 04:19:34,546 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:20:05] 2026-01-27 04:19:34,546 | INFO     | update_server=False
[2026-01-26 23:20:05] 2026-01-27 04:19:34,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:20:05] 2026-01-27 04:19:34,910 | INFO     | all job control threads have been joined
[2026-01-26 23:20:05] 2026-01-27 04:19:35,006 | INFO     | all data control threads have been joined
[2026-01-26 23:20:05] 2026-01-27 04:19:35,212 | INFO     | all payload control threads have been joined
[2026-01-26 23:20:05] 2026-01-27 04:19:35,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:20:05] 2026-01-27 04:19:35,283 | INFO     | aborting loop
[2026-01-26 23:20:05] 2026-01-27 04:19:35,552 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:20:05] 2026-01-27 04:19:35,887 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,916 | INFO     | [job] control thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,982 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,986 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,990 | INFO     | [job] validate thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:35,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,030 | INFO     | [data] control thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,218 | INFO     | [payload] control thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,289 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,413 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:20:05] 2026-01-27 04:19:36,448 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,798 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:36,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:20:05] 2026-01-27 04:19:37,448 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:37,627 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:40,809 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:20:05] 2026-01-27 04:19:51,174 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:20:05] 2026-01-27 04:19:51,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303429883712)>', '<ExcThread(monitor, started 140303067498240)>']
[2026-01-26 23:20:05] 2026-01-27 04:19:56,266 | INFO     | all workflow threads have been joined
[2026-01-26 23:20:05] 2026-01-27 04:19:56,266 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:20:05] 2026-01-27 04:19:56,267 | INFO     | traces error code: 0
[2026-01-26 23:20:05] 2026-01-27 04:19:56,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:20:05] 2026-01-27 04:20:05,084 | INFO     | PID=4166397 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 23:20:05] 2026-01-27 04:20:05,084 | INFO     | .. there are 8 such processes running
[2026-01-26 23:20:05] 2026-01-27 04:20:05,086 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:20:05] 2026-01-27 04:20:05,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:20:05] 2026-01-27 04:20:05,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:20:05] 2026-01-27 04:20:05,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:20:05] 2026-01-27 04:20:05,087 | INFO     | [monitor] control thread has ended
[2026-01-26 23:20:05] 2026-01-27 04:20:05,193 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:20:05] 2026-01-27 04:20:05,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:20:05] 2026-01-27 04:20:05,199 [wrapper] pilotpid: 4166397
[2026-01-26 23:20:05] 2026-01-27 04:20:05,201 [wrapper] Pilot exit status: 0
[2026-01-26 23:20:05] 2026-01-27 04:20:05,266 [wrapper] pandaids: 6983344862
[2026-01-26 23:20:05] 2026-01-27 04:20:05,425 [wrapper] cleanup supervisor_pilot  715045 4166398
[2026-01-26 23:20:05] 2026-01-27 04:20:05,440 [wrapper] Test setup, not cleaning
[2026-01-26 23:20:05] 2026-01-27 04:20:05,474 [wrapper] apfmon messages muted
[2026-01-26 23:20:05] 2026-01-27 04:20:05,489 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:20:05] 2026-01-27 04:20:05,496 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:20:05]  *** Error codes and diagnostics ***
[2026-01-26 23:20:05]     "exeErrorCode": 0,
[2026-01-26 23:20:05]     "exeErrorDiag": "",
[2026-01-26 23:20:05]     "pilotErrorCode": 0,
[2026-01-26 23:20:05]     "pilotErrorDiag": "",
[2026-01-26 23:20:05]  *** Listing of results directory ***
[2026-01-26 23:20:05] total 681020
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 15:48 queuedata.json
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 23:20:05] -rwx------. 1 boincer umatlas     36322 Jan 25 15:48 runpilot2-wrapper.sh
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas       100 Jan 26 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:20:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 14:12 run_atlas
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas       105 Jan 26 14:12 job.xml
[2026-01-26 23:20:05] -rw-r--r--. 2 boincer umatlas 502733713 Jan 26 14:12 EVNT.48317869._000023.pool.root.1
[2026-01-26 23:20:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 14:12 start_atlas.sh
[2026-01-26 23:20:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 14:12 shared
[2026-01-26 23:20:05] -rw-r--r--. 2 boincer umatlas    597744 Jan 26 14:12 input.tar.gz
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas         0 Jan 26 14:12 boinc_lockfile
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas      2512 Jan 26 14:12 pandaJob.out
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas        57 Jan 26 14:12 setup.sh.local
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas   1006384 Jan 26 14:12 agis_schedconf.cvmfs.json
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas       442 Jan 26 14:12 workernode_map.json
[2026-01-26 23:20:05] drwx------. 5 boincer umatlas      4096 Jan 26 14:12 pilot3
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas 181526327 Jan 26 23:17 HITS.48317872._001110.pool.root.1
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas       530 Jan 26 23:17 boinc_task_state.xml
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas      6610 Jan 26 23:18 init_data.xml
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas      1034 Jan 26 23:19 memory_monitor_summary.json
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas   1516246 Jan 26 23:19 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas    674217 Jan 26 23:19 log.48317872._001110.job.log.tgz.1
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas      6380 Jan 26 23:19 heartbeat.json
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 23:20 boinc_mmap_file
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas        27 Jan 26 23:20 wrapper_checkpoint.txt
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas        95 Jan 26 23:20 pilot_heartbeat.json
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas       822 Jan 26 23:20 pilotlog.txt
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas   3910263 Jan 26 23:20 log.48317872._001110.job.log.1
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas       357 Jan 26 23:20 output.list
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas       620 Jan 26 23:20 runtime_log
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas   4597760 Jan 26 23:20 result.tar.gz
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas      9342 Jan 26 23:20 runtime_log.err
[2026-01-26 23:20:05] -rw-------. 1 boincer umatlas       658 Jan 26 23:20 EvAMDmWDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5I8KDmddHIJo.diag
[2026-01-26 23:20:05] -rw-r--r--. 1 boincer umatlas     21155 Jan 26 23:20 stderr.txt
[2026-01-26 23:20:06] HITS file was successfully produced:
[2026-01-26 23:20:06] -rw-------. 1 boincer umatlas 181526327 Jan 26 23:17 shared/HITS.pool.root.1
[2026-01-26 23:20:06]  *** Contents of shared directory: ***
[2026-01-26 23:20:06] total 673324
[2026-01-26 23:20:06] -rw-r--r--. 2 boincer umatlas 502733713 Jan 26 14:12 ATLAS.root_0
[2026-01-26 23:20:06] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 14:12 start_atlas.sh
[2026-01-26 23:20:06] -rw-r--r--. 2 boincer umatlas    597744 Jan 26 14:12 input.tar.gz
[2026-01-26 23:20:06] -rw-------. 1 boincer umatlas 181526327 Jan 26 23:17 HITS.pool.root.1
[2026-01-26 23:20:06] -rw-------. 1 boincer umatlas   4597760 Jan 26 23:20 result.tar.gz
23:20:07 (4162741): run_atlas exited; CPU time 55358.273728
23:20:07 (4162741): called boinc_finish(0)

</stderr_txt>
]]>

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