Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:08:44 (16920): wrapper (7.7.26015): starting
11:08:44 (16920): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 11:08:44] Arguments: --nthreads 8
[2026-01-27 11:08:44] Threads: 8
[2026-01-27 11:08:44] Checking for CVMFS
[2026-01-27 11:08:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 11:08:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 11:08:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 11:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 11:08:47] 2.11.2.0 1076 61198 132848 155579 3 93 20526054 25165824 1088 130560 0 21878988 99.793 17795256 3156 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 11:08:47] CVMFS is ok
[2026-01-27 11:08:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 11:08:47] Checking for apptainer binary...
[2026-01-27 11:08:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 11:08:47] Running /usr/bin/apptainer --version
[2026-01-27 11:08:47] apptainer version 1.3.2-1.el7
[2026-01-27 11:08:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 11:09:09] cg-vwn456.simple-grid.lan
[2026-01-27 11:09:09] apptainer works
[2026-01-27 11:09:09] Set ATHENA_PROC_NUMBER=8
[2026-01-27 11:09:09] Set ATHENA_CORE_NUMBER=8
[2026-01-27 11:09:09] Starting ATLAS job with PandaID=6983773237
[2026-01-27 11:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 14:27:35]  *** The last 200 lines of the pilot log: ***
[2026-01-27 14:27:35] 2026-01-27 13:26:26,527 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6983773237/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,528 | INFO     | extracted standard info from prmon json
[2026-01-27 14:27:35] 2026-01-27 13:26:26,528 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 14:27:35] 2026-01-27 13:26:26,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 14:27:35] 2026-01-27 13:26:26,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 14:27:35] 2026-01-27 13:26:26,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 14:27:35] 2026-01-27 13:26:26,535 | INFO     | fitting pss+swap vs Time
[2026-01-27 14:27:35] 2026-01-27 13:26:26,536 | INFO     | sum of square deviations: 1931608310.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,537 | INFO     | sum of deviations: 58158448437.50002
[2026-01-27 14:27:35] 2026-01-27 13:26:26,537 | INFO     | mean x: 1769514790.5
[2026-01-27 14:27:35] 2026-01-27 13:26:26,537 | INFO     | mean y: 2438931.277173913
[2026-01-27 14:27:35] 2026-01-27 13:26:26,538 | INFO     | intersect: -53275564776.77681
[2026-01-27 14:27:35] 2026-01-27 13:26:26,538 | INFO     | chi2: 8.232093003124184
[2026-01-27 14:27:35] 2026-01-27 13:26:26,538 | INFO     | sum of square deviations: 1778377530.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,543 | INFO     | sum of deviations: 68720227160.99998
[2026-01-27 14:27:35] 2026-01-27 13:26:26,543 | INFO     | mean x: 1769514638.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,543 | INFO     | mean y: 2449177.7374301674
[2026-01-27 14:27:35] 2026-01-27 13:26:26,543 | INFO     | intersect: -68375297300.01674
[2026-01-27 14:27:35] 2026-01-27 13:26:26,544 | INFO     | chi2: 7.5625546636685685
[2026-01-27 14:27:35] 2026-01-27 13:26:26,544 | INFO     | current chi2=7.5625546636685685 (change=8.13326986468104 %)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,544 | INFO     | right removable region: 178
[2026-01-27 14:27:35] 2026-01-27 13:26:26,544 | INFO     | sum of square deviations: 1778377530.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,553 | INFO     | sum of deviations: -4989795119.999991
[2026-01-27 14:27:35] 2026-01-27 13:26:26,553 | INFO     | mean x: 1769514943.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,553 | INFO     | mean y: 2501720.413407821
[2026-01-27 14:27:35] 2026-01-27 13:26:26,553 | INFO     | intersect: 4967430076.963473
[2026-01-27 14:27:35] 2026-01-27 13:26:26,554 | INFO     | chi2: 3.1666173767872303
[2026-01-27 14:27:35] 2026-01-27 13:26:26,554 | INFO     | current chi2=3.1666173767872303 (change=61.53326528763149 %)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,554 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 14:27:35] 2026-01-27 13:26:26,555 | INFO     | sum of deviations: -45523008355.5
[2026-01-27 14:27:35] 2026-01-27 13:26:26,555 | INFO     | mean x: 1769515095.5
[2026-01-27 14:27:35] 2026-01-27 13:26:26,556 | INFO     | mean y: 2544168.706896552
[2026-01-27 14:27:35] 2026-01-27 13:26:26,556 | INFO     | intersect: 49316904278.26453
[2026-01-27 14:27:35] 2026-01-27 13:26:26,556 | INFO     | chi2: 1.0160013347215298
[2026-01-27 14:27:35] 2026-01-27 13:26:26,556 | INFO     | current chi2=1.0160013347215298 (change=67.91524791819532 %)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,556 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,558 | INFO     | sum of deviations: -47349216260.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,558 | INFO     | mean x: 1769515248.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,558 | INFO     | mean y: 2546115.644970414
[2026-01-27 14:27:35] 2026-01-27 13:26:26,558 | INFO     | intersect: 55983948334.21844
[2026-01-27 14:27:35] 2026-01-27 13:26:26,558 | INFO     | chi2: 0.9636319182604572
[2026-01-27 14:27:35] 2026-01-27 13:26:26,559 | INFO     | current chi2=0.9636319182604572 (change=5.154463352690985 %)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,559 | INFO     | left removable region: 30
[2026-01-27 14:27:35] 2026-01-27 13:26:26,559 | INFO     | sum of square deviations: 1005179777.0
[2026-01-27 14:27:35] 2026-01-27 13:26:26,560 | INFO     | sum of deviations: -18628452975.000004
[2026-01-27 14:27:35] 2026-01-27 13:26:26,560 | INFO     | mean x: 1769515522.5
[2026-01-27 14:27:35] 2026-01-27 13:26:26,560 | INFO     | mean y: 2539060.9054054054
[2026-01-27 14:27:35] 2026-01-27 13:26:26,560 | INFO     | intersect: 32796012878.896687
[2026-01-27 14:27:35] 2026-01-27 13:26:26,561 | INFO     | chi2: 0.13571092271235646
[2026-01-27 14:27:35] 2026-01-27 13:26:26,561 | INFO     | current memory leak: -18.53 B/s (using 148 data points, chi2=0.14)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,561 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | ..............................
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . Timing measurements:
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . get job = 0 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . initial setup = 116 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . payload setup = 167 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . stage-in = 0 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . payload execution = 11291 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,562 | INFO     | . stage-out = 4 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,563 | INFO     | . log creation = 1 s
[2026-01-27 14:27:35] 2026-01-27 13:26:26,563 | INFO     | ..............................
[2026-01-27 14:27:35] 2026-01-27 13:26:27,094 | INFO     | 
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | job summary report
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | --------------------------------------------------
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | PanDA job id: 6983773237
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | task id: 48317872
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | errors: (none)
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | pilot state: finished 
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | transexitcode: 0
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | exeerrorcode: 0
[2026-01-27 14:27:35] 2026-01-27 13:26:27,095 | INFO     | exeerrordiag: 
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | exitcode: 0
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | exitmsg: OK
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | cpuconsumptiontime: 53280 s
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | nevents: 400
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | neventsw: 0
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | pid: 25371
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | pgrp: 25371
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | corecount: 8
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | event service: False
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | sizes: {0: 2283739, 1: 2252033, 2: 2284284, 12: 2284284, 11463: 2313587, 11464: 2313586, 11469: 2322824, 11470: 2322962}
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | --------------------------------------------------
[2026-01-27 14:27:35] 2026-01-27 13:26:27,096 | INFO     | 
[2026-01-27 14:27:35] 2026-01-27 13:26:27,097 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-27 14:27:35] 2026-01-27 13:26:27,599 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,599 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,601 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 14:27:35] 2026-01-27 13:26:27,602 | INFO     | job 6983773237 has completed (purged errors)
[2026-01-27 14:27:35] 2026-01-27 13:26:27,602 | INFO     | overall cleanup function is called
[2026-01-27 14:27:35] 2026-01-27 13:26:28,610 | INFO     | --- collectZombieJob: --- 10, [25371]
[2026-01-27 14:27:35] 2026-01-27 13:26:28,611 | INFO     | zombie collector waiting for pid 25371
[2026-01-27 14:27:35] 2026-01-27 13:26:28,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 14:27:35] 2026-01-27 13:26:28,611 | INFO     | collected zombie processes
[2026-01-27 14:27:35] 2026-01-27 13:26:28,611 | INFO     | will attempt to kill all subprocesses of pid=25371
[2026-01-27 14:27:35] 2026-01-27 13:26:28,693 | INFO     | process IDs to be killed: [25371] (in reverse order)
[2026-01-27 14:27:35] 2026-01-27 13:26:29,566 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 14:27:35] 2026-01-27 13:26:29,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 14:27:35] 2026-01-27 13:26:29,568 | INFO     | did not find any defunct processes belonging to 25371
[2026-01-27 14:27:35] 2026-01-27 13:26:29,570 | INFO     | did not find any defunct processes belonging to 25371
[2026-01-27 14:27:35] 2026-01-27 13:26:29,570 | INFO     | ready for new job
[2026-01-27 14:27:35] 2026-01-27 13:26:29,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 14:27:35] 2026-01-27 13:26:29,572 | INFO     | **************************************
[2026-01-27 14:27:35] 2026-01-27 13:26:29,572 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 14:27:35] 2026-01-27 13:26:29,572 | INFO     | **************************************
[2026-01-27 14:27:35] 2026-01-27 13:26:29,573 | INFO     | 
[2026-01-27 14:27:35] 2026-01-27 13:26:29,573 | INFO     | pilot is running in a VM
[2026-01-27 14:27:35] 2026-01-27 13:26:29,573 | INFO     | architecture information:
[2026-01-27 14:27:35] 2026-01-27 13:26:29,577 | INFO     | executing command: cat /etc/os-release
[2026-01-27 14:27:35] 2026-01-27 13:26:29,927 | INFO     | cat /etc/os-release:
[2026-01-27 14:27:35] NAME="CentOS Linux"
[2026-01-27 14:27:35] VERSION="7 (Core)"
[2026-01-27 14:27:35] ID="centos"
[2026-01-27 14:27:35] ID_LIKE="rhel fedora"
[2026-01-27 14:27:35] VERSION_ID="7"
[2026-01-27 14:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 14:27:35] ANSI_COLOR="0;31"
[2026-01-27 14:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 14:27:35] HOME_URL="https://www.centos.org/"
[2026-01-27 14:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 14:27:35] 
[2026-01-27 14:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 14:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 14:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 14:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 14:27:35] 
[2026-01-27 14:27:35] 2026-01-27 13:26:29,927 | INFO     | **************************************
[2026-01-27 14:27:35] 2026-01-27 13:26:30,431 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-27 14:27:35] 2026-01-27 13:26:30,675 | INFO     | sufficient remaining disk space (496651730944 B)
[2026-01-27 14:27:35] 2026-01-27 13:26:30,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 14:27:35] 2026-01-27 13:26:30,675 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 14:27:35] 2026-01-27 13:26:30,676 | INFO     | update_server=False
[2026-01-27 14:27:35] 2026-01-27 13:26:30,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 14:27:35] 2026-01-27 13:26:30,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 14:27:35] 2026-01-27 13:26:30,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 14:27:35] 2026-01-27 13:26:30,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:27:35] 2026-01-27 13:26:30,708 | INFO     | will abort loop
[2026-01-27 14:27:35] 2026-01-27 13:26:31,182 | INFO     | all data control threads have been joined
[2026-01-27 14:27:35] 2026-01-27 13:26:31,389 | INFO     | all payload control threads have been joined
[2026-01-27 14:27:35] 2026-01-27 13:26:31,557 | INFO     | all job control threads have been joined
[2026-01-27 14:27:35] 2026-01-27 13:26:31,682 | INFO     | [job] retrieve thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:31,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:27:35] 2026-01-27 13:26:31,713 | INFO     | [job] job monitor thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:31,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 14:27:35] 2026-01-27 13:26:31,921 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:31,995 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,188 | INFO     | [data] control thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,395 | INFO     | [payload] control thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,413 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 14:27:35] 2026-01-27 13:26:32,563 | INFO     | [job] control thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,587 | INFO     | [data] copytool_in thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,709 | INFO     | [job] queue monitor thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:32,891 | INFO     | [payload] failed_post thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:33,009 | INFO     | [job] validate thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:33,267 | INFO     | [payload] validate_post thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:33,879 | INFO     | [data] copytool_out thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:36,536 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:41,527 | INFO     | job.realtimelogging is not enabled
[2026-01-27 14:27:35] 2026-01-27 13:26:42,533 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 14:27:35] 2026-01-27 13:26:59,285 | INFO     | PID=20903 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 14:27:35] 2026-01-27 13:26:59,285 | INFO     | .. there are 2 such processes running
[2026-01-27 14:27:35] 2026-01-27 13:26:59,285 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 14:27:35] 2026-01-27 13:26:59,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 14:27:35] 2026-01-27 13:26:59,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 14:27:35] 2026-01-27 13:27:23,903 | INFO     | [monitor] cgroup control has ended
[2026-01-27 14:27:35] 2026-01-27 13:27:25,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885586380608)>', '<ExcThread(monitor, started 139884920559360)>']
[2026-01-27 14:27:35] 2026-01-27 13:27:25,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 14:27:35] 2026-01-27 13:27:25,441 | INFO     | [monitor] control thread has ended
[2026-01-27 14:27:35] 2026-01-27 13:27:30,453 | INFO     | all workflow threads have been joined
[2026-01-27 14:27:35] 2026-01-27 13:27:30,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 14:27:35] 2026-01-27 13:27:30,454 | INFO     | traces error code: 0
[2026-01-27 14:27:35] 2026-01-27 13:27:30,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 14:27:35] 2026-01-27 13:27:30,625 [wrapper] ==== pilot stdout END ====
[2026-01-27 14:27:35] 2026-01-27 13:27:30,640 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 14:27:35] 2026-01-27 13:27:30,652 [wrapper] pilotpid: 20903
[2026-01-27 14:27:35] 2026-01-27 13:27:30,783 [wrapper] Pilot exit status: 0
[2026-01-27 14:27:35] 2026-01-27 13:27:31,261 [wrapper] pandaids: 6983773237
[2026-01-27 14:27:35] 2026-01-27 13:27:32,493 [wrapper] cleanup supervisor_pilot 15050 20904
[2026-01-27 14:27:35] 2026-01-27 13:27:32,586 [wrapper] Test setup, not cleaning
[2026-01-27 14:27:35] 2026-01-27 13:27:32,667 [wrapper] apfmon messages muted
[2026-01-27 14:27:35] 2026-01-27 13:27:32,750 [wrapper] ==== wrapper stdout END ====
[2026-01-27 14:27:35] 2026-01-27 13:27:32,841 [wrapper] ==== wrapper stderr END ====
[2026-01-27 14:27:35]  *** Error codes and diagnostics ***
[2026-01-27 14:27:35]     "exeErrorCode": 0,
[2026-01-27 14:27:35]     "exeErrorDiag": "",
[2026-01-27 14:27:35]     "pilotErrorCode": 0,
[2026-01-27 14:27:35]     "pilotErrorDiag": "",
[2026-01-27 14:27:35]  *** Listing of results directory ***
[2026-01-27 14:27:35] total 674476
[2026-01-27 14:27:35] -rwx------. 1 boinc boinc     36322 Jan 26 04:20 runpilot2-wrapper.sh
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc      5111 Jan 26 04:24 queuedata.json
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc    584422 Jan 26 04:24 pilot3.tar.gz
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc       100 Jan 27 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 14:27:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 11:08 run_atlas
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc       105 Jan 27 11:08 job.xml
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc 496630580 Jan 27 11:08 EVNT.48317869._000041.pool.root.1
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc     15845 Jan 27 11:08 start_atlas.sh
[2026-01-27 14:27:35] drwxrwx--x. 2 boinc boinc        68 Jan 27 11:08 shared
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc    597752 Jan 27 11:08 input.tar.gz
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc      6391 Jan 27 11:08 init_data.xml
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc         0 Jan 27 11:08 boinc_lockfile
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc      2512 Jan 27 11:09 pandaJob.out
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc       413 Jan 27 11:15 workernode_map.json
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc   1002845 Jan 27 11:15 agis_schedconf.cvmfs.json
[2026-01-27 14:27:35] drwx------. 5 boinc boinc      4096 Jan 27 11:15 pilot3
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc 186030648 Jan 27 14:25 HITS.48317872._002015.pool.root.1
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc       532 Jan 27 14:25 boinc_task_state.xml
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc      1022 Jan 27 14:26 memory_monitor_summary.json
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc        95 Jan 27 14:26 pilot_heartbeat.json
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc   1516246 Jan 27 14:26 agis_ddmendpoints.agis.ALL.json
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc    410075 Jan 27 14:26 log.48317872._002015.job.log.tgz.1
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc      6326 Jan 27 14:26 heartbeat.json
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc      8192 Jan 27 14:27 boinc_mmap_file
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc        28 Jan 27 14:27 wrapper_checkpoint.txt
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc      5138 Jan 27 14:27 pilotlog.txt
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc   1629607 Jan 27 14:27 log.48317872._002015.job.log.1
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc       357 Jan 27 14:27 output.list
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc       620 Jan 27 14:27 runtime_log
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc   2058240 Jan 27 14:27 result.tar.gz
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc      8816 Jan 27 14:27 runtime_log.err
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc       655 Jan 27 14:27 BM7KDmhKS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm538KDmFryWnm.diag
[2026-01-27 14:27:35] -rw-r--r--. 1 boinc boinc     20651 Jan 27 14:27 stderr.txt
[2026-01-27 14:27:35] HITS file was successfully produced:
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc 186030648 Jan 27 14:25 shared/HITS.pool.root.1
[2026-01-27 14:27:35]  *** Contents of shared directory: ***
[2026-01-27 14:27:35] total 669276
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc 496630580 Jan 27 11:08 ATLAS.root_0
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc     15845 Jan 27 11:08 start_atlas.sh
[2026-01-27 14:27:35] -rw-r--r--. 2 boinc boinc    597752 Jan 27 11:08 input.tar.gz
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc 186030648 Jan 27 14:25 HITS.pool.root.1
[2026-01-27 14:27:35] -rw-------. 1 boinc boinc   2058240 Jan 27 14:27 result.tar.gz
14:27:37 (16920): run_atlas exited; CPU time 53394.099039
14:27:37 (16920): called boinc_finish(0)

</stderr_txt>
]]>

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