Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:10:14 (2552044): wrapper (7.7.26015): starting
02:10:14 (2552044): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 02:10:14] Arguments: --nthreads 4
[2026-01-28 02:10:14] Threads: 4
[2026-01-28 02:10:14] Checking for CVMFS
[2026-01-28 02:10:14] No cvmfs_config command found, will try listing directly
[2026-01-28 02:10:14] CVMFS is ok
[2026-01-28 02:10:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 02:10:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 02:10:14] Further information can be found at the LHC@home message board.
[2026-01-28 02:10:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 02:10:14] Checking for apptainer binary...
[2026-01-28 02:10:14] which: no apptainer in ((null))
[2026-01-28 02:10:14] apptainer is not installed, using version from CVMFS
[2026-01-28 02:10:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 02:10:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-01-28 02:10:14] apptainer works
[2026-01-28 02:10:14] Set ATHENA_PROC_NUMBER=4
[2026-01-28 02:10:14] Set ATHENA_CORE_NUMBER=4
[2026-01-28 02:10:14] Starting ATLAS job with PandaID=6983772385
[2026-01-28 02:10:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 04:51:20]  *** The last 200 lines of the pilot log: ***
[2026-01-28 04:51:20] 2026-01-28 03:49:55,324 | INFO     | mean y: 2310984.1401273888
[2026-01-28 04:51:20] 2026-01-28 03:49:55,324 | INFO     | intersect: 945179058.5766969
[2026-01-28 04:51:20] 2026-01-28 03:49:55,324 | INFO     | chi2: 2.01971092044464
[2026-01-28 04:51:20] 2026-01-28 03:49:55,325 | INFO     | sum of square deviations: 1088905998.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | sum of deviations: 8895225478.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | mean x: 1769567270.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | mean y: 2323740.388157895
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | intersect: -14453193907.032589
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | chi2: 1.25773395738037
[2026-01-28 04:51:20] 2026-01-28 03:49:55,326 | INFO     | current chi2=1.25773395738037 (change=37.727030900863795 %)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,327 | INFO     | sum of square deviations: 984941258.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,327 | INFO     | sum of deviations: 8689410167.000002
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | mean x: 1769567118.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | mean y: 2323438.380952381
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | intersect: -15609261903.836575
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | chi2: 1.2589504841834374
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | current chi2=1.2589504841834374 (change=-0.09672369867480385 %)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | right removable region: 146
[2026-01-28 04:51:20] 2026-01-28 03:49:55,328 | INFO     | sum of square deviations: 1088905998.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,329 | INFO     | sum of deviations: -18365754919.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,329 | INFO     | mean x: 1769567575.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,330 | INFO     | mean y: 2334898.427631579
[2026-01-28 04:51:20] 2026-01-28 03:49:55,330 | INFO     | intersect: 29848294480.630993
[2026-01-28 04:51:20] 2026-01-28 03:49:55,330 | INFO     | chi2: 0.7974503549422917
[2026-01-28 04:51:20] 2026-01-28 03:49:55,330 | INFO     | current chi2=0.7974503549422917 (change=60.51660923996328 %)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,330 | INFO     | sum of square deviations: 984941258.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,331 | INFO     | sum of deviations: -17122679382.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,331 | INFO     | mean x: 1769567728.0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,331 | INFO     | mean y: 2333068.238095238
[2026-01-28 04:51:20] 2026-01-28 03:49:55,331 | INFO     | intersect: 30765325891.591003
[2026-01-28 04:51:20] 2026-01-28 03:49:55,332 | INFO     | chi2: 0.7978808838282161
[2026-01-28 04:51:20] 2026-01-28 03:49:55,332 | INFO     | current chi2=0.7978808838282161 (change=-0.053988174092114635 %)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,332 | INFO     | left removable region: 20
[2026-01-28 04:51:20] 2026-01-28 03:49:55,332 | INFO     | sum of square deviations: 620244187.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,333 | INFO     | sum of deviations: -5007659244.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,333 | INFO     | mean x: 1769567697.5
[2026-01-28 04:51:20] 2026-01-28 03:49:55,333 | INFO     | mean y: 2343755.404761905
[2026-01-28 04:51:20] 2026-01-28 03:49:55,333 | INFO     | intersect: 14289284637.30453
[2026-01-28 04:51:20] 2026-01-28 03:49:55,333 | INFO     | chi2: 0.009713864318453246
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | current memory leak: -8.07 B/s (using 126 data points, chi2=0.01)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | could have reported an average CPU frequency of 2698 MHz (9 samples)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | ..............................
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | . Timing measurements:
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | . get job = 0 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | . initial setup = 8 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,334 | INFO     | . payload setup = 8 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,335 | INFO     | . stage-in = 0 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,335 | INFO     | . payload execution = 9527 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,335 | INFO     | . stage-out = 0 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,335 | INFO     | . log creation = 0 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,335 | INFO     | ..............................
[2026-01-28 04:51:20] 2026-01-28 03:49:55,429 | INFO     | 
[2026-01-28 04:51:20] 2026-01-28 03:49:55,429 | INFO     | job summary report
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | --------------------------------------------------
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | PanDA job id: 6983772385
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | task id: 48317872
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | errors: (none)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | pilot state: finished 
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | transexitcode: 0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,430 | INFO     | exeerrorcode: 0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | exeerrordiag: 
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | exitcode: 0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | exitmsg: OK
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | cpuconsumptiontime: 36459 s
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | nevents: 400
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | neventsw: 0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | pid: 2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | pgrp: 2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | corecount: 4
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | event service: False
[2026-01-28 04:51:20] 2026-01-28 03:49:55,431 | INFO     | sizes: {0: 2284244, 11: 2284244, 9539: 2312989, 9540: 2312988, 9542: 2322066, 9545: 2322122, 9547: 2322508}
[2026-01-28 04:51:20] 2026-01-28 03:49:55,432 | INFO     | --------------------------------------------------
[2026-01-28 04:51:20] 2026-01-28 03:49:55,432 | INFO     | 
[2026-01-28 04:51:20] 2026-01-28 03:49:55,432 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-28 04:51:20] 2026-01-28 03:49:55,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | job 6983772385 has completed (purged errors)
[2026-01-28 04:51:20] 2026-01-28 03:49:55,465 | INFO     | overall cleanup function is called
[2026-01-28 04:51:20] 2026-01-28 03:49:55,867 | WARNING  | process 2562044 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 04:51:20] 2026-01-28 03:49:56,476 | INFO     | --- collectZombieJob: --- 10, [2562044]
[2026-01-28 04:51:20] 2026-01-28 03:49:56,477 | INFO     | zombie collector waiting for pid 2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:56,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 04:51:20] 2026-01-28 03:49:56,477 | INFO     | collected zombie processes
[2026-01-28 04:51:20] 2026-01-28 03:49:56,477 | INFO     | will attempt to kill all subprocesses of pid=2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:56,558 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 04:51:20] 2026-01-28 03:49:56,559 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 04:51:20] 2026-01-28 03:49:56,560 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-28 04:51:20] 2026-01-28 03:49:56,560 | WARNING  | maxPSS not found in memory monitor output
[2026-01-28 04:51:20] 2026-01-28 03:49:56,561 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6983772385/payload.stdout) since it has not been created yet
[2026-01-28 04:51:20] 2026-01-28 03:49:56,561 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-28 04:51:20] 2026-01-28 03:49:56,586 | INFO     | sufficient remaining disk space (3325136207872 B)
[2026-01-28 04:51:20] 2026-01-28 03:49:56,587 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-28 04:51:20] 2026-01-28 03:49:56,587 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6983772385/HITS.48317872._001640.pool.root.1 since it does not exist
[2026-01-28 04:51:20] 2026-01-28 03:49:58,735 | INFO     | process IDs to be killed: [2562044] (in reverse order)
[2026-01-28 04:51:20] 2026-01-28 03:49:58,802 | INFO     | number of running child processes to parent process 2562044: 1
[2026-01-28 04:51:20] 2026-01-28 03:49:58,802 | INFO     | maximum number of monitored processes: 6
[2026-01-28 04:51:20] 2026-01-28 03:49:58,802 | INFO     | aborting job monitoring since job object (job id=6983772385) has expired
[2026-01-28 04:51:20] 2026-01-28 03:49:58,999 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 04:51:20] 2026-01-28 03:49:58,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 04:51:20] 2026-01-28 03:49:59,031 | INFO     | did not find any defunct processes belonging to 2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:59,063 | INFO     | did not find any defunct processes belonging to 2562044
[2026-01-28 04:51:20] 2026-01-28 03:49:59,064 | INFO     | ready for new job
[2026-01-28 04:51:20] 2026-01-28 03:49:59,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 04:51:20] 2026-01-28 03:49:59,067 | INFO     | **************************************
[2026-01-28 04:51:20] 2026-01-28 03:49:59,067 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 04:51:20] 2026-01-28 03:49:59,067 | INFO     | **************************************
[2026-01-28 04:51:20] 2026-01-28 03:49:59,067 | INFO     | 
[2026-01-28 04:51:20] 2026-01-28 03:49:59,076 | INFO     | architecture information:
[2026-01-28 04:51:20] 2026-01-28 03:49:59,076 | INFO     | executing command: cat /etc/os-release
[2026-01-28 04:51:20] 2026-01-28 03:49:59,099 | INFO     | cat /etc/os-release:
[2026-01-28 04:51:20] NAME="CentOS Linux"
[2026-01-28 04:51:20] VERSION="7 (Core)"
[2026-01-28 04:51:20] ID="centos"
[2026-01-28 04:51:20] ID_LIKE="rhel fedora"
[2026-01-28 04:51:20] VERSION_ID="7"
[2026-01-28 04:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 04:51:20] ANSI_COLOR="0;31"
[2026-01-28 04:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 04:51:20] HOME_URL="https://www.centos.org/"
[2026-01-28 04:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 04:51:20] 
[2026-01-28 04:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 04:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 04:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 04:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 04:51:20] 
[2026-01-28 04:51:20] 2026-01-28 03:49:59,099 | INFO     | **************************************
[2026-01-28 04:51:20] 2026-01-28 03:49:59,602 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-28 04:51:20] 2026-01-28 03:49:59,632 | INFO     | sufficient remaining disk space (3325135159296 B)
[2026-01-28 04:51:20] 2026-01-28 03:49:59,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 04:51:20] 2026-01-28 03:49:59,633 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 04:51:20] 2026-01-28 03:49:59,633 | INFO     | update_server=False
[2026-01-28 04:51:20] 2026-01-28 03:49:59,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 04:51:20] 2026-01-28 03:49:59,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 04:51:20] 2026-01-28 03:49:59,634 | INFO     | will abort loop
[2026-01-28 04:51:20] 2026-01-28 03:50:00,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 04:51:20] 2026-01-28 03:50:00,140 | INFO     | all payload control threads have been joined
[2026-01-28 04:51:20] 2026-01-28 03:50:00,377 | INFO     | all data control threads have been joined
[2026-01-28 04:51:20] 2026-01-28 03:50:00,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 04:51:20] 2026-01-28 03:50:00,639 | INFO     | [job] retrieve thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:00,640 | INFO     | [job] job monitor thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:00,791 | INFO     | [payload] failed_post thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:00,983 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,090 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 04:51:20] 2026-01-28 03:50:01,143 | INFO     | all job control threads have been joined
[2026-01-28 04:51:20] 2026-01-28 03:50:01,145 | INFO     | [payload] control thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,280 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,362 | INFO     | [data] copytool_in thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,383 | INFO     | [data] control thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:01,439 | INFO     | [job] queue monitor thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:02,118 | INFO     | [job] validate thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:02,148 | INFO     | [job] control thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:02,182 | INFO     | [payload] validate_post thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:03,118 | INFO     | [data] copytool_out thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:04,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:10,368 | INFO     | job.realtimelogging is not enabled
[2026-01-28 04:51:20] 2026-01-28 03:50:11,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 04:51:20] 2026-01-28 03:50:27,743 | INFO     | PID=2556520 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 04:51:20] 2026-01-28 03:50:27,744 | INFO     | .. there are 8 such processes running
[2026-01-28 04:51:20] 2026-01-28 03:50:27,744 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 04:51:20] 2026-01-28 03:50:27,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 04:51:20] 2026-01-28 03:50:27,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 04:51:20] 2026-01-28 03:50:51,806 | INFO     | [monitor] cgroup control has ended
[2026-01-28 04:51:20] 2026-01-28 03:50:52,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22416680904512)>', '<ExcThread(monitor, started 22416105404160)>']
[2026-01-28 04:51:20] 2026-01-28 03:50:52,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 04:51:20] 2026-01-28 03:50:52,860 | INFO     | [monitor] control thread has ended
[2026-01-28 04:51:20] 2026-01-28 03:50:57,655 | INFO     | all workflow threads have been joined
[2026-01-28 04:51:20] 2026-01-28 03:50:57,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 04:51:20] 2026-01-28 03:50:57,656 | INFO     | traces error code: 0
[2026-01-28 04:51:20] 2026-01-28 03:50:57,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 04:51:20] 2026-01-28 03:50:57,837 [wrapper] ==== pilot stdout END ====
[2026-01-28 04:51:20] 2026-01-28 03:50:57,841 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 04:51:20] 2026-01-28 03:50:57,845 [wrapper] pilotpid: 2556520
[2026-01-28 04:51:20] 2026-01-28 03:50:57,849 [wrapper] Pilot exit status: 0
[2026-01-28 04:51:20] 2026-01-28 03:50:57,872 [wrapper] pandaids: 6983772385
[2026-01-28 04:51:20] 2026-01-28 03:50:58,040 [wrapper] cleanup supervisor_pilot 2752103 2556521
[2026-01-28 04:51:20] 2026-01-28 03:50:58,044 [wrapper] Test setup, not cleaning
[2026-01-28 04:51:20] 2026-01-28 03:50:58,048 [wrapper] apfmon messages muted
[2026-01-28 04:51:20] 2026-01-28 03:50:58,051 [wrapper] ==== wrapper stdout END ====
[2026-01-28 04:51:20] 2026-01-28 03:50:58,055 [wrapper] ==== wrapper stderr END ====
[2026-01-28 04:51:20]  *** Error codes and diagnostics ***
[2026-01-28 04:51:20]     "exeErrorCode": 0,
[2026-01-28 04:51:20]     "exeErrorDiag": "",
[2026-01-28 04:51:20]     "pilotErrorCode": 0,
[2026-01-28 04:51:20]     "pilotErrorDiag": "",
[2026-01-28 04:51:20]  *** Listing of results directory ***
[2026-01-28 04:51:20] total 670076
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-28 04:51:20] -rwx------ 1 boinc boinc     36322 Jan 26 04:19 runpilot2-wrapper.sh
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:21 queuedata.json
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc       100 Jan 28 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 04:51:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 02:10 run_atlas
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc       105 Jan 28 02:10 job.xml
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc 494221727 Jan 28 02:10 EVNT.48317869._000033.pool.root.1
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc      6692 Jan 28 02:10 init_data.xml
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:10 start_atlas.sh
[2026-01-28 04:51:20] drwxrwx--x 2 boinc boinc      4096 Jan 28 02:10 shared
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc    597752 Jan 28 02:10 input.tar.gz
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc         0 Jan 28 02:10 boinc_lockfile
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc      2514 Jan 28 02:10 pandaJob.out
[2026-01-28 04:51:20] -rw------- 1 boinc boinc   1005240 Jan 28 02:10 agis_schedconf.cvmfs.json
[2026-01-28 04:51:20] -rw------- 1 boinc boinc   1516246 Jan 28 02:10 agis_ddmendpoints.agis.ALL.json
[2026-01-28 04:51:20] -rw------- 1 boinc boinc       444 Jan 28 02:10 workernode_map.json
[2026-01-28 04:51:20] drwx------ 5 boinc boinc      4096 Jan 28 02:10 pilot3
[2026-01-28 04:51:20] -rw------- 1 boinc boinc 184608357 Jan 28 04:49 HITS.48317872._001640.pool.root.1
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc       529 Jan 28 04:49 boinc_task_state.xml
[2026-01-28 04:51:20] -rw------- 1 boinc boinc        95 Jan 28 04:49 pilot_heartbeat.json
[2026-01-28 04:51:20] -rw------- 1 boinc boinc      1029 Jan 28 04:49 memory_monitor_summary.json
[2026-01-28 04:51:20] -rw------- 1 boinc boinc    354329 Jan 28 04:49 log.48317872._001640.job.log.tgz.1
[2026-01-28 04:51:20] -rw------- 1 boinc boinc      6355 Jan 28 04:49 heartbeat.json
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc        26 Jan 28 04:50 wrapper_checkpoint.txt
[2026-01-28 04:51:20] -rw------- 1 boinc boinc      4906 Jan 28 04:50 pilotlog.txt
[2026-01-28 04:51:20] -rw------- 1 boinc boinc   1338940 Jan 28 04:50 log.48317872._001640.job.log.1
[2026-01-28 04:51:20] -rw------- 1 boinc boinc       357 Jan 28 04:50 output.list
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc       620 Jan 28 04:50 runtime_log
[2026-01-28 04:51:20] -rw------- 1 boinc boinc   1710080 Jan 28 04:50 result.tar.gz
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc      9221 Jan 28 04:50 runtime_log.err
[2026-01-28 04:51:20] -rw------- 1 boinc boinc       663 Jan 28 04:50 WXkNDmiJS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJ08KDmCnvyVn.diag
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc      8192 Jan 28 04:51 boinc_mmap_file
[2026-01-28 04:51:20] -rw-r--r-- 1 boinc boinc     21277 Jan 28 04:51 stderr.txt
[2026-01-28 04:51:20] HITS file was successfully produced:
[2026-01-28 04:51:20] -rw------- 1 boinc boinc 184608357 Jan 28 04:49 shared/HITS.pool.root.1
[2026-01-28 04:51:20]  *** Contents of shared directory: ***
[2026-01-28 04:51:20] total 665204
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc 494221727 Jan 28 02:10 ATLAS.root_0
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:10 start_atlas.sh
[2026-01-28 04:51:20] -rw-r--r-- 2 boinc boinc    597752 Jan 28 02:10 input.tar.gz
[2026-01-28 04:51:20] -rw------- 1 boinc boinc 184608357 Jan 28 04:49 HITS.pool.root.1
[2026-01-28 04:51:20] -rw------- 1 boinc boinc   1710080 Jan 28 04:50 result.tar.gz
04:51:22 (2552044): run_atlas exited; CPU time 37161.852274
04:51:22 (2552044): called boinc_finish(0)

</stderr_txt>
]]>

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