Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:21 (1331298): wrapper (7.7.26015): starting
08:44:21 (1331298): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 08:44:21] Arguments: --nthreads 4
[2026-01-28 08:44:21] Threads: 4
[2026-01-28 08:44:21] Checking for CVMFS
[2026-01-28 08:44:21] No cvmfs_config command found, will try listing directly
[2026-01-28 08:44:21] CVMFS is ok
[2026-01-28 08:44:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 08:44:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 08:44:21] Further information can be found at the LHC@home message board.
[2026-01-28 08:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 08:44:21] Checking for apptainer binary...
[2026-01-28 08:44:21] which: no apptainer in ((null))
[2026-01-28 08:44:21] apptainer is not installed, using version from CVMFS
[2026-01-28 08:44:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 08:44:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-28 08:44:21] apptainer works
[2026-01-28 08:44:21] Set ATHENA_PROC_NUMBER=4
[2026-01-28 08:44:21] Set ATHENA_CORE_NUMBER=4
[2026-01-28 08:44:21] Starting ATLAS job with PandaID=6983326688
[2026-01-28 08:44:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 11:49:13]  *** The last 200 lines of the pilot log: ***
[2026-01-28 11:49:13] 2026-01-28 10:32:54,502 | INFO     | job 6983326688 has state=finished
[2026-01-28 11:49:13] 2026-01-28 10:32:54,503 | INFO     | preparing for final server update for job 6983326688 in state='finished'
[2026-01-28 11:49:13] 2026-01-28 10:32:54,503 | INFO     | reading metadata from: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6983326688/jobReport.json
[2026-01-28 11:49:13] 2026-01-28 10:32:54,506 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot60/slots/0/workernode_map.json
[2026-01-28 11:49:13] 2026-01-28 10:32:54,507 | INFO     | this job has now completed (state=finished)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,507 | INFO     | log transfer has been attempted: DONE
[2026-01-28 11:49:13] 2026-01-28 10:32:54,507 | INFO     | job 6983326688 has finished - writing final server update
[2026-01-28 11:49:13] 2026-01-28 10:32:54,508 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1362453/.job.ad'
[2026-01-28 11:49:13] 2026-01-28 10:32:54,508 | INFO     | total number of processed events: 400 (read)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,521 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6983326688/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,522 | INFO     | extracted standard info from prmon json
[2026-01-28 11:49:13] 2026-01-28 10:32:54,522 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 11:49:13] 2026-01-28 10:32:54,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 11:49:13] 2026-01-28 10:32:54,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 11:49:13] 2026-01-28 10:32:54,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 11:49:13] 2026-01-28 10:32:54,526 | INFO     | fitting pss+swap vs Time
[2026-01-28 11:49:13] 2026-01-28 10:32:54,527 | INFO     | sum of square deviations: 1392881930.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,528 | INFO     | sum of deviations: -23062706454.999996
[2026-01-28 11:49:13] 2026-01-28 10:32:54,528 | INFO     | mean x: 1769591305.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,528 | INFO     | mean y: 2383873.2848484847
[2026-01-28 11:49:13] 2026-01-28 10:32:54,528 | INFO     | intersect: 29302473086.543125
[2026-01-28 11:49:13] 2026-01-28 10:32:54,529 | INFO     | chi2: 1.6057104687656907
[2026-01-28 11:49:13] 2026-01-28 10:32:54,529 | INFO     | sum of square deviations: 1270051720.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,530 | INFO     | sum of deviations: -22167560399.500004
[2026-01-28 11:49:13] 2026-01-28 10:32:54,530 | INFO     | mean x: 1769591152.5
[2026-01-28 11:49:13] 2026-01-28 10:32:54,530 | INFO     | mean y: 2384984.98125
[2026-01-28 11:49:13] 2026-01-28 10:32:54,530 | INFO     | intersect: 30888937192.0556
[2026-01-28 11:49:13] 2026-01-28 10:32:54,531 | INFO     | chi2: 1.6002664990187732
[2026-01-28 11:49:13] 2026-01-28 10:32:54,531 | INFO     | current chi2=1.6002664990187732 (change=0.33903806774718853 %)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,531 | INFO     | right removable region: 159
[2026-01-28 11:49:13] 2026-01-28 10:32:54,531 | INFO     | sum of square deviations: 1270051720.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,532 | INFO     | sum of deviations: -40224977246.500015
[2026-01-28 11:49:13] 2026-01-28 10:32:54,532 | INFO     | mean x: 1769591457.5
[2026-01-28 11:49:13] 2026-01-28 10:32:54,532 | INFO     | mean y: 2404716.54375
[2026-01-28 11:49:13] 2026-01-28 10:32:54,532 | INFO     | intersect: 56048764870.70999
[2026-01-28 11:49:13] 2026-01-28 10:32:54,533 | INFO     | chi2: 0.33554923993429964
[2026-01-28 11:49:13] 2026-01-28 10:32:54,533 | INFO     | current chi2=0.33554923993429964 (change=79.10275566726321 %)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,533 | INFO     | sum of square deviations: 1154663510.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,534 | INFO     | sum of deviations: -32881700409.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,534 | INFO     | mean x: 1769591610.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,534 | INFO     | mean y: 2395001.729032258
[2026-01-28 11:49:13] 2026-01-28 10:32:54,534 | INFO     | intersect: 50395588050.93171
[2026-01-28 11:49:13] 2026-01-28 10:32:54,535 | INFO     | chi2: 0.3164917092509962
[2026-01-28 11:49:13] 2026-01-28 10:32:54,535 | INFO     | current chi2=0.3164917092509962 (change=5.679503457386735 %)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,535 | INFO     | left removable region: 20
[2026-01-28 11:49:13] 2026-01-28 10:32:54,535 | INFO     | sum of square deviations: 832722590.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,536 | INFO     | sum of deviations: -16283296079.999998
[2026-01-28 11:49:13] 2026-01-28 10:32:54,536 | INFO     | mean x: 1769591732.0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,536 | INFO     | mean y: 2372695.035971223
[2026-01-28 11:49:13] 2026-01-28 10:32:54,536 | INFO     | intersect: 34605476368.34452
[2026-01-28 11:49:13] 2026-01-28 10:32:54,537 | INFO     | chi2: 0.22402836663355497
[2026-01-28 11:49:13] 2026-01-28 10:32:54,537 | INFO     | current memory leak: -19.55 B/s (using 139 data points, chi2=0.22)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,537 | INFO     | could have reported an average CPU frequency of 2671 MHz (9 samples)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,537 | INFO     | ..............................
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . Timing measurements:
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . get job = 0 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . initial setup = 5 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . payload setup = 6 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . stage-in = 0 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . payload execution = 10069 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . stage-out = 1 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | . log creation = 0 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,538 | INFO     | ..............................
[2026-01-28 11:49:13] 2026-01-28 10:32:54,641 | INFO     | 
[2026-01-28 11:49:13] 2026-01-28 10:32:54,641 | INFO     | job summary report
[2026-01-28 11:49:13] 2026-01-28 10:32:54,641 | INFO     | --------------------------------------------------
[2026-01-28 11:49:13] 2026-01-28 10:32:54,641 | INFO     | PanDA job id: 6983326688
[2026-01-28 11:49:13] 2026-01-28 10:32:54,641 | INFO     | task id: 48310724
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | errors: (none)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | pilot state: finished 
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | transexitcode: 0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | exeerrorcode: 0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | exeerrordiag: 
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | exitcode: 0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | exitmsg: OK
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | cpuconsumptiontime: 38868 s
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | nevents: 400
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | neventsw: 0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | pid: 1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | pgrp: 1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | corecount: 4
[2026-01-28 11:49:13] 2026-01-28 10:32:54,642 | INFO     | event service: False
[2026-01-28 11:49:13] 2026-01-28 10:32:54,643 | INFO     | sizes: {0: 2283832, 1: 2284236, 11: 2284236, 10079: 2312815, 10080: 2312814, 10082: 2322102, 10084: 2322304}
[2026-01-28 11:49:13] 2026-01-28 10:32:54,643 | INFO     | --------------------------------------------------
[2026-01-28 11:49:13] 2026-01-28 10:32:54,643 | INFO     | 
[2026-01-28 11:49:13] 2026-01-28 10:32:54,643 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-28 11:49:13] 2026-01-28 10:32:54,665 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,665 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | job 6983326688 has completed (purged errors)
[2026-01-28 11:49:13] 2026-01-28 10:32:54,667 | INFO     | overall cleanup function is called
[2026-01-28 11:49:13] 2026-01-28 10:32:55,675 | INFO     | --- collectZombieJob: --- 10, [1340207]
[2026-01-28 11:49:13] 2026-01-28 10:32:55,676 | INFO     | zombie collector waiting for pid 1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:55,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 11:49:13] 2026-01-28 10:32:55,676 | INFO     | collected zombie processes
[2026-01-28 11:49:13] 2026-01-28 10:32:55,676 | INFO     | will attempt to kill all subprocesses of pid=1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:56,060 | INFO     | process IDs to be killed: [1340207] (in reverse order)
[2026-01-28 11:49:13] 2026-01-28 10:32:56,179 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 11:49:13] 2026-01-28 10:32:56,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 11:49:13] 2026-01-28 10:32:56,194 | INFO     | did not find any defunct processes belonging to 1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:56,207 | INFO     | did not find any defunct processes belonging to 1340207
[2026-01-28 11:49:13] 2026-01-28 10:32:56,208 | INFO     | ready for new job
[2026-01-28 11:49:13] 2026-01-28 10:32:56,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 11:49:13] 2026-01-28 10:32:56,210 | INFO     | **************************************
[2026-01-28 11:49:13] 2026-01-28 10:32:56,211 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 11:49:13] 2026-01-28 10:32:56,211 | INFO     | **************************************
[2026-01-28 11:49:13] 2026-01-28 10:32:56,211 | INFO     | 
[2026-01-28 11:49:13] 2026-01-28 10:32:56,215 | INFO     | architecture information:
[2026-01-28 11:49:13] 2026-01-28 10:32:56,215 | INFO     | executing command: cat /etc/os-release
[2026-01-28 11:49:13] 2026-01-28 10:32:56,232 | INFO     | cat /etc/os-release:
[2026-01-28 11:49:13] NAME="CentOS Linux"
[2026-01-28 11:49:13] VERSION="7 (Core)"
[2026-01-28 11:49:13] ID="centos"
[2026-01-28 11:49:13] ID_LIKE="rhel fedora"
[2026-01-28 11:49:13] VERSION_ID="7"
[2026-01-28 11:49:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 11:49:13] ANSI_COLOR="0;31"
[2026-01-28 11:49:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 11:49:13] HOME_URL="https://www.centos.org/"
[2026-01-28 11:49:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 11:49:13] 
[2026-01-28 11:49:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 11:49:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 11:49:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 11:49:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 11:49:13] 
[2026-01-28 11:49:13] 2026-01-28 10:32:56,233 | INFO     | **************************************
[2026-01-28 11:49:13] 2026-01-28 10:32:56,736 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-28 11:49:13] 2026-01-28 10:32:56,754 | INFO     | sufficient remaining disk space (680350711808 B)
[2026-01-28 11:49:13] 2026-01-28 10:32:56,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 11:49:13] 2026-01-28 10:32:56,755 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 11:49:13] 2026-01-28 10:32:56,755 | INFO     | update_server=False
[2026-01-28 11:49:13] 2026-01-28 10:32:56,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 11:49:13] 2026-01-28 10:32:56,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 11:49:13] 2026-01-28 10:32:56,756 | INFO     | aborting loop
[2026-01-28 11:49:13] 2026-01-28 10:32:57,264 | INFO     | all data control threads have been joined
[2026-01-28 11:49:13] 2026-01-28 10:32:57,272 | INFO     | all job control threads have been joined
[2026-01-28 11:49:13] 2026-01-28 10:32:57,760 | INFO     | [job] retrieve thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:57,761 | INFO     | [job] job monitor thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:57,847 | INFO     | [job] validate thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:57,867 | INFO     | all payload control threads have been joined
[2026-01-28 11:49:13] 2026-01-28 10:32:57,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 11:49:13] 2026-01-28 10:32:58,048 | INFO     | [payload] validate_post thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,078 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,270 | INFO     | [data] control thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,277 | INFO     | [job] control thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,291 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 11:49:13] 2026-01-28 10:32:58,774 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,774 | INFO     | [data] copytool_in thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:58,873 | INFO     | [payload] control thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:59,043 | INFO     | [payload] failed_post thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:32:59,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 11:49:13] 2026-01-28 10:32:59,901 | INFO     | [data] copytool_out thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:33:00,657 | INFO     | [job] queue monitor thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:33:02,509 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:33:06,820 | INFO     | job.realtimelogging is not enabled
[2026-01-28 11:49:13] 2026-01-28 10:33:07,826 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 11:49:13] 2026-01-28 10:33:27,377 | INFO     | PID=1335379 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 11:49:13] 2026-01-28 10:33:27,377 | INFO     | .. there are 3 such processes running
[2026-01-28 11:49:13] 2026-01-28 10:33:27,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 11:49:13] 2026-01-28 10:33:27,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 11:49:13] 2026-01-28 10:33:27,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 11:49:13] 2026-01-28 10:33:55,469 | INFO     | [monitor] cgroup control has ended
[2026-01-28 11:49:13] 2026-01-28 10:33:57,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22884707460928)>', '<ExcThread(monitor, started 22884461573888)>']
[2026-01-28 11:49:13] 2026-01-28 10:33:58,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 11:49:13] 2026-01-28 10:33:58,507 | INFO     | [monitor] control thread has ended
[2026-01-28 11:49:13] 2026-01-28 10:34:02,537 | INFO     | all workflow threads have been joined
[2026-01-28 11:49:13] 2026-01-28 10:34:02,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 11:49:13] 2026-01-28 10:34:02,538 | INFO     | traces error code: 0
[2026-01-28 11:49:13] 2026-01-28 10:34:02,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 11:49:13] 2026-01-28 10:34:02,782 [wrapper] ==== pilot stdout END ====
[2026-01-28 11:49:13] 2026-01-28 10:34:02,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 11:49:13] 2026-01-28 10:34:02,789 [wrapper] pilotpid: 1335379
[2026-01-28 11:49:13] 2026-01-28 10:34:02,792 [wrapper] Pilot exit status: 0
[2026-01-28 11:49:13] 2026-01-28 10:34:02,805 [wrapper] pandaids: 6983326688
[2026-01-28 11:49:13] 2026-01-28 10:34:02,888 [wrapper] cleanup supervisor_pilot 1436476 1335380
[2026-01-28 11:49:13] 2026-01-28 10:34:02,891 [wrapper] Test setup, not cleaning
[2026-01-28 11:49:13] 2026-01-28 10:34:02,894 [wrapper] apfmon messages muted
[2026-01-28 11:49:13] 2026-01-28 10:34:02,898 [wrapper] ==== wrapper stdout END ====
[2026-01-28 11:49:13] 2026-01-28 10:34:02,901 [wrapper] ==== wrapper stderr END ====
[2026-01-28 11:49:13]  *** Error codes and diagnostics ***
[2026-01-28 11:49:13]     "exeErrorCode": 0,
[2026-01-28 11:49:13]     "exeErrorDiag": "",
[2026-01-28 11:49:13]     "pilotErrorCode": 0,
[2026-01-28 11:49:13]     "pilotErrorDiag": "",
[2026-01-28 11:49:13]  *** Listing of results directory ***
[2026-01-28 11:49:13] total 672052
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-28 11:49:13] -rwx------ 1 boinc boinc     36322 Jan 25 19:48 runpilot2-wrapper.sh
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:48 queuedata.json
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc       100 Jan 28 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 11:49:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 08:44 run_atlas
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc       105 Jan 28 08:44 job.xml
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc      6639 Jan 28 08:44 init_data.xml
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc 501813084 Jan 28 08:44 EVNT.48310721._000007.pool.root.1
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc    597764 Jan 28 08:44 input.tar.gz
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc     15845 Jan 28 08:44 start_atlas.sh
[2026-01-28 11:49:13] drwxrwx--x 2 boinc boinc      4096 Jan 28 08:44 shared
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc         0 Jan 28 08:44 boinc_lockfile
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc      2531 Jan 28 08:44 pandaJob.out
[2026-01-28 11:49:13] -rw------- 1 boinc boinc   1004489 Jan 28 08:44 agis_schedconf.cvmfs.json
[2026-01-28 11:49:13] -rw------- 1 boinc boinc   1516246 Jan 28 08:44 agis_ddmendpoints.agis.ALL.json
[2026-01-28 11:49:13] -rw------- 1 boinc boinc       448 Jan 28 08:44 workernode_map.json
[2026-01-28 11:49:13] drwx------ 5 boinc boinc      4096 Jan 28 08:44 pilot3
[2026-01-28 11:49:13] -rw------- 1 boinc boinc 178783028 Jan 28 11:32 HITS.48310724._010368.pool.root.1
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc       529 Jan 28 11:32 boinc_task_state.xml
[2026-01-28 11:49:13] -rw------- 1 boinc boinc      1035 Jan 28 11:32 memory_monitor_summary.json
[2026-01-28 11:49:13] -rw------- 1 boinc boinc    389028 Jan 28 11:32 log.48310724._010368.job.log.tgz.1
[2026-01-28 11:49:13] -rw------- 1 boinc boinc      6397 Jan 28 11:32 heartbeat.json
[2026-01-28 11:49:13] -rw------- 1 boinc boinc        95 Jan 28 11:33 pilot_heartbeat.json
[2026-01-28 11:49:13] -rw------- 1 boinc boinc      4901 Jan 28 11:34 pilotlog.txt
[2026-01-28 11:49:13] -rw------- 1 boinc boinc   1431988 Jan 28 11:34 log.48310724._010368.job.log.1
[2026-01-28 11:49:13] -rw------- 1 boinc boinc       357 Jan 28 11:34 output.list
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc       620 Jan 28 11:34 runtime_log
[2026-01-28 11:49:13] -rw------- 1 boinc boinc   1843200 Jan 28 11:34 result.tar.gz
[2026-01-28 11:49:13] -rw------- 1 boinc boinc       664 Jan 28 11:34 UEUNDmYLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYR1KDmpbiAGo.diag
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc      9205 Jan 28 11:34 runtime_log.err
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc        26 Jan 28 11:48 wrapper_checkpoint.txt
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc      8192 Jan 28 11:49 boinc_mmap_file
[2026-01-28 11:49:13] -rw-r--r-- 1 boinc boinc     21102 Jan 28 11:49 stderr.txt
[2026-01-28 11:49:13] HITS file was successfully produced:
[2026-01-28 11:49:13] -rw------- 1 boinc boinc 178783028 Jan 28 11:32 shared/HITS.pool.root.1
[2026-01-28 11:49:13]  *** Contents of shared directory: ***
[2026-01-28 11:49:13] total 667056
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc 501813084 Jan 28 08:44 ATLAS.root_0
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc    597764 Jan 28 08:44 input.tar.gz
[2026-01-28 11:49:13] -rw-r--r-- 2 boinc boinc     15845 Jan 28 08:44 start_atlas.sh
[2026-01-28 11:49:13] -rw------- 1 boinc boinc 178783028 Jan 28 11:32 HITS.pool.root.1
[2026-01-28 11:49:13] -rw------- 1 boinc boinc   1843200 Jan 28 11:34 result.tar.gz
11:49:15 (1331298): run_atlas exited; CPU time 39312.336918
11:49:15 (1331298): called boinc_finish(0)

</stderr_txt>
]]>

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