Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-27 05:51:34 (7656): vboxwrapper version 26210
2026-01-27 05:51:34 (7656): BOINC client version: 8.0.2
2026-01-27 05:51:34 (7656): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-27 05:51:35 (7656): Successfully copied 'init_data.xml' to the shared directory.
2026-01-27 05:51:35 (7656): Create VM. (boinc_1f03d12c4030a9b6, slot#6)
2026-01-27 05:51:35 (7656): Setting Memory Size for VM. (4700MB)
2026-01-27 05:51:36 (7656): Setting CPU Count for VM. (7)
2026-01-27 05:51:36 (7656): Setting Chipset Options for VM.
2026-01-27 05:51:36 (7656): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-27 05:51:36 (7656): Setting Boot Options for VM.
2026-01-27 05:51:37 (7656): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-27 05:51:37 (7656): Enabling VM Network Access.
2026-01-27 05:51:38 (7656): Disabling USB Support for VM.
2026-01-27 05:51:38 (7656): Disabling COM Port Support for VM.
2026-01-27 05:51:38 (7656): Disabling LPT Port Support for VM.
2026-01-27 05:51:38 (7656): Disabling Audio Support for VM.
2026-01-27 05:51:39 (7656): Disabling Clipboard Support for VM.
2026-01-27 05:51:39 (7656): Disabling Drag and Drop Support for VM.
2026-01-27 05:51:39 (7656): Adding storage controller(s) to VM.
2026-01-27 05:51:39 (7656): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-27 05:51:42 (7656): Adding VirtualBox Guest Additions to VM.
2026-01-27 05:51:42 (7656): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-27 05:51:42 (7656): forwarding host port 60978 to guest port 80
2026-01-27 05:51:42 (7656): Enabling remote desktop for VM.
2026-01-27 05:51:43 (7656): Required extension pack not installed, remote desktop not enabled.
2026-01-27 05:51:43 (7656): Enabling shared directory for VM.
2026-01-27 05:51:43 (7656): Starting VM using VBoxManage interface. (boinc_1f03d12c4030a9b6, slot#6)
2026-01-27 05:51:50 (7656): Successfully started VM. (PID = '9332')
2026-01-27 05:51:50 (7656): Reporting VM Process ID to BOINC.
2026-01-27 05:51:50 (7656): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-27 05:51:50 (7656): Guest Log: CPUID EDX: 0x178bfbff
2026-01-27 05:51:50 (7656): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-27 05:51:50 (7656): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-27 05:51:50 (7656): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-27 05:51:50 (7656): Detected: Web Application Enabled (http://localhost:60978)
2026-01-27 05:51:50 (7656): Preference change detected
2026-01-27 05:51:50 (7656): Setting CPU throttle for VM. (95%)
2026-01-27 05:51:50 (7656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 05:51:52 (7656): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-27 05:51:52 (7656): Guest Log: BIOS: Booting from Hard Disk...
2026-01-27 05:51:55 (7656): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-27 05:51:55 (7656): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-27 05:51:55 (7656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-27 05:52:04 (7656): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-27 05:52:04 (7656): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-27 05:52:13 (7656): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000206 main     Log opened 2026-01-27T05:52:11.192657000Z
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000407 main     OS Product: Linux
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000457 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000551 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000553 main     Process ID: 1356
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.000554 main     Package type: LINUX_64BITS_GENERIC
2026-01-27 05:52:13 (7656): Guest Log: 00:00:00.001757 main     5.2.32 r132073 started. Verbose level = 0
2026-01-27 05:52:13 (7656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-27 05:52:13 (7656): Guest Log: [INFO] Mounting shared directory
2026-01-27 05:52:13 (7656): Guest Log: [INFO] Checking for init_data.xml
2026-01-27 05:52:23 (7656): Guest Log: 00:00:10.004889 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 467 665 000ns (GuestNow=1 769 514 742 663 972 000 ns GuestLast=1 769 493 131 196 307 000 ns fSetTimeLastLoop=true )
2026-01-27 05:52:40 (7656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-27 05:52:40 (7656): Guest Log: [INFO] Detected branch: prod
2026-01-27 05:52:41 (7656): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-27 05:52:41 (7656): Guest Log: Copying input files
2026-01-27 05:52:45 (7656): Guest Log: Copied input files into RunAtlas.
2026-01-27 05:52:45 (7656): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-27 05:52:45 (7656): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-27 05:52:45 (7656): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-27 05:52:45 (7656): Guest Log: Further information can be found at the LHC@home message board.
2026-01-27 05:53:50 (7656): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-27 05:53:51 (7656): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-27 05:53:51 (7656): Guest Log: 2.6.3.0 1642 1 30152 155583 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-27 05:53:52 (7656): Guest Log: copied the webapp to /var/www
2026-01-27 05:53:52 (7656): Guest Log: ATHENA_PROC_NUMBER=7
2026-01-27 05:53:52 (7656): Guest Log: ATHENA_CORE_NUMBER=7
2026-01-27 05:53:53 (7656): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-27 05:53:53 (7656): Guest Log:  *** Starting ATLAS job. (PandaID=6983771790 taskID=48318042) ***
2026-01-27 07:31:55 (7656): Status Report: Elapsed Time: '6000.000000'
2026-01-27 07:31:55 (7656): Status Report: CPU Time: '29682.718750'
2026-01-27 09:12:01 (7656): Status Report: Elapsed Time: '12000.000000'
2026-01-27 09:12:01 (7656): Status Report: CPU Time: '71459.234375'
2026-01-27 10:52:06 (7656): Status Report: Elapsed Time: '18000.000000'
2026-01-27 10:52:06 (7656): Status Report: CPU Time: '113230.328125'
2026-01-27 11:23:32 (7656): Guest Log:  *** Job finished ***
2026-01-27 11:23:32 (7656): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:22:58,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:22:58,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:21,038 | INFO     | [monitor] cgroup control has ended
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:22,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713900386112)>', '<ExcThread(monitor, started 140712725182208)>']
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:23,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:23,736 | INFO     | [monitor] control thread has ended
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,774 | INFO     | all workflow threads have been joined
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,775 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,776 | INFO     | traces error code: 0
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,932 [wrapper] ==== pilot stdout END ====
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,938 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,944 [wrapper] pilotpid: 6143
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:27,950 [wrapper] Pilot exit status: 0
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,046 [wrapper] pandaids: 6983771790
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,105 [wrapper] cleanup supervisor_pilot 30165 6144
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,114 [wrapper] Test setup, not cleaning
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,120 [wrapper] apfmon messages muted
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,126 [wrapper] ==== wrapper stdout END ====
2026-01-27 11:23:32 (7656): Guest Log: 2026-01-27 17:23:28,132 [wrapper] ==== wrapper stderr END ====
2026-01-27 11:23:32 (7656): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 11:23:32 (7656): Guest Log:     "exeErrorCode": 0,
2026-01-27 11:23:32 (7656): Guest Log:     "exeErrorDiag": "",
2026-01-27 11:23:32 (7656): Guest Log:     "pilotErrorCode": 0,
2026-01-27 11:23:32 (7656): Guest Log:     "pilotErrorDiag": "",
2026-01-27 11:23:32 (7656): Guest Log:  *** Listing of results directory ***
2026-01-27 11:23:32 (7656): Guest Log: total 192292
2026-01-27 11:23:32 (7656): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 26 03:18 runpilot2-wrapper.sh
2026-01-27 11:23:32 (7656): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 26 03:19 queuedata.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 26 03:19 pilot3.tar.gz
2026-01-27 11:23:32 (7656): Guest Log: -rwxr-xr-x. 1 atlas atlas      7115 Jan 27 11:52 init_data.xml
2026-01-27 11:23:32 (7656): Guest Log: -rwxr-xr-x. 1 atlas atlas    597764 Jan 27 11:52 input.tar.gz
2026-01-27 11:23:32 (7656): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 27 11:52 start_atlas.sh
2026-01-27 11:23:32 (7656): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 27 11:52 EVNT.48318040._000032.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 11:23:32 (7656): Guest Log: -rw-r--r--. 1 atlas atlas      2533 Jan 27 11:53 pandaJob.out
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas   1002853 Jan 27 11:59 agis_schedconf.cvmfs.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas       438 Jan 27 11:59 workernode_map.json
2026-01-27 11:23:32 (7656): Guest Log: drwx------. 5 atlas atlas      4096 Jan 27 12:00 pilot3
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas 186629607 Jan 27 17:21 HITS.48318042._001612.pool.root.1
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas      1034 Jan 27 17:22 memory_monitor_summary.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 17:22 agis_ddmendpoints.agis.ALL.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas    554636 Jan 27 17:22 log.48318042._001612.job.log.tgz.1
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas      6392 Jan 27 17:22 heartbeat.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 17:22 pilot_heartbeat.json
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 27 17:23 pilotlog.txt
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas   2651728 Jan 27 17:23 log.48318042._001612.job.log.1
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 17:23 output.list
2026-01-27 11:23:32 (7656): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 17:23 runtime_log
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas   3225600 Jan 27 17:23 result.tar.gz
2026-01-27 11:23:32 (7656): Guest Log: -rw-r--r--. 1 atlas atlas      8776 Jan 27 17:23 runtime_log.err
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas       667 Jan 27 17:23 8W2LDmIIS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtN2KDmlE8Kkm.diag
2026-01-27 11:23:32 (7656): Guest Log: Looking for outputfile HITS.48318042._001612.pool.root.1
2026-01-27 11:23:32 (7656): Guest Log: HITS file was successfully produced
2026-01-27 11:23:32 (7656): Guest Log: -rw-------. 1 atlas atlas 186629607 Jan 27 17:21 /home/atlas/RunAtlas/HITS.48318042._001612.pool.root.1
2026-01-27 11:23:33 (7656): Guest Log: Successfully finished the ATLAS job!
2026-01-27 11:23:33 (7656): Guest Log: Copying the results back to the shared directory!
2026-01-27 11:23:34 (7656): Guest Log:  *** Contents of shared directory: ***
2026-01-27 11:23:34 (7656): Guest Log: total 679860
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root 505693359 Jan 27 11:51 ATLAS.root_0
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root 186629607 Jan 27 17:23 HITS.pool.root.1
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root      7115 Jan 27 11:51 init_data.xml
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root    597764 Jan 26 19:15 input.tar.gz
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root   3225600 Jan 27 17:23 result.tar.gz
2026-01-27 11:23:34 (7656): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 19:15 start_atlas.sh
2026-01-27 11:23:34 (7656): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 11:23:34 (7656): VM Completion File Detected.
2026-01-27 11:23:34 (7656): Powering off VM.
2026-01-27 11:23:35 (7656): Successfully stopped VM.
2026-01-27 11:23:35 (7656): Deregistering VM. (boinc_1f03d12c4030a9b6, slot#6)
2026-01-27 11:23:35 (7656): Removing network bandwidth throttle group from VM.
2026-01-27 11:23:35 (7656): Removing VM from VirtualBox.
2026-01-27 11:23:40 (7656): called boinc_finish(0)

</stderr_txt>
]]>

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