Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:53 (26981): wrapper (7.7.26015): starting
13:40:53 (26981): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 13:40:53] Arguments: --nthreads 12
[2026-01-26 13:40:53] Threads: 12
[2026-01-26 13:40:53] Checking for CVMFS
[2026-01-26 13:40:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:40:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:40:53] 2.11.2.0 28623 368518 100944 155556 1 50 12224588 20275201 1 130560 4 158841884 99.949 21676536 16436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 13:40:53] CVMFS is ok
[2026-01-26 13:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 13:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 13:40:53] Further information can be found at the LHC@home message board.
[2026-01-26 13:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:40:53] Checking for apptainer binary...
[2026-01-26 13:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:40:53] Running /usr/bin/apptainer --version
[2026-01-26 13:40:53] apptainer version 1.3.2-1.el7
[2026-01-26 13:40:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:40:55] c-205-20.aglt2.org
[2026-01-26 13:40:55] apptainer works
[2026-01-26 13:40:55] Set ATHENA_PROC_NUMBER=12
[2026-01-26 13:40:55] Set ATHENA_CORE_NUMBER=12
[2026-01-26 13:40:55] Starting ATLAS job with PandaID=6983304253
[2026-01-26 13:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:59:34]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:59:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 14:59:34]  replicas=None
[2026-01-26 14:59:34]  scope=mc23_13p6TeV
[2026-01-26 14:59:34]  status=None
[2026-01-26 14:59:34]  status_code=0
[2026-01-26 14:59:34]  storage_token=
[2026-01-26 14:59:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983304253/log.48318042._000592.job.log.tgz.1
[2026-01-26 14:59:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/c5/log.48318042._000592.job.log.tgz.1
[2026-01-26 14:59:34]  workdir=None
[2026-01-26 14:59:34] ]
[2026-01-26 14:59:34] 2026-01-26 19:58:59,384 | INFO     | transferring file log.48318042._000592.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983304253/log.48318042._000592.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 14:59:34] 2026-01-26 19:58:59,384 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983304253/log.48318042._000592.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318042._000592.job
[2026-01-26 14:59:34] 2026-01-26 19:58:59,406 | INFO     | adding to output.list: log.48318042._000592.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/c5/log.48318042._000592.job.log.tg
[2026-01-26 14:59:34] 2026-01-26 19:58:59,407 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 14:59:34] 2026-01-26 19:58:59,407 | INFO     | summary of transferred files:
[2026-01-26 14:59:34] 2026-01-26 19:58:59,407 | INFO     |  -- lfn=log.48318042._000592.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 14:59:34] 2026-01-26 19:58:59,408 | INFO     | stage-out finished correctly
[2026-01-26 14:59:34] 2026-01-26 19:59:00,512 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 14:59:34] 2026-01-26 19:59:00,941 | INFO     | time since job start (4665s) is within the limit (349056.0s)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,232 | INFO     | job 6983304253 has state=finished
[2026-01-26 14:59:34] 2026-01-26 19:59:02,232 | INFO     | preparing for final server update for job 6983304253 in state='finished'
[2026-01-26 14:59:34] 2026-01-26 19:59:02,232 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983304253/jobReport.json
[2026-01-26 14:59:34] 2026-01-26 19:59:02,235 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 14:59:34] 2026-01-26 19:59:02,236 | INFO     | this job has now completed (state=finished)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,236 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,236 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:59:34] 2026-01-26 19:59:02,236 | INFO     | job 6983304253 has finished - writing final server update
[2026-01-26 14:59:34] 2026-01-26 19:59:02,237 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,239 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983304253/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,239 | INFO     | extracted standard info from prmon json
[2026-01-26 14:59:34] 2026-01-26 19:59:02,239 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:59:34] 2026-01-26 19:59:02,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:59:34] 2026-01-26 19:59:02,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:59:34] 2026-01-26 19:59:02,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:59:34] 2026-01-26 19:59:02,241 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:59:34] 2026-01-26 19:59:02,242 | INFO     | sum of square deviations: 101843770.0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,242 | INFO     | sum of deviations: -6659972680.000002
[2026-01-26 14:59:34] 2026-01-26 19:59:02,242 | INFO     | mean x: 1769455278.0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,242 | INFO     | mean y: 2758738.507246377
[2026-01-26 14:59:34] 2026-01-26 19:59:02,242 | INFO     | intersect: 115714537769.8786
[2026-01-26 14:59:34] 2026-01-26 19:59:02,243 | INFO     | chi2: 0.1193278396896247
[2026-01-26 14:59:34] 2026-01-26 19:59:02,243 | INFO     | current memory leak: -65.39 B/s (using 69 data points, chi2=0.12)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,243 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,243 | INFO     | ..............................
[2026-01-26 14:59:34] 2026-01-26 19:59:02,243 | INFO     | . Timing measurements:
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . get job = 0 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . initial setup = 7 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . payload setup = 7 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . stage-in = 0 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . payload execution = 4641 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . stage-out = 0 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | . log creation = 0 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,244 | INFO     | ..............................
[2026-01-26 14:59:34] 2026-01-26 19:59:02,321 | INFO     | 
[2026-01-26 14:59:34] 2026-01-26 19:59:02,321 | INFO     | job summary report
[2026-01-26 14:59:34] 2026-01-26 19:59:02,321 | INFO     | --------------------------------------------------
[2026-01-26 14:59:34] 2026-01-26 19:59:02,321 | INFO     | PanDA job id: 6983304253
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | task id: 48318042
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | errors: (none)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | pilot state: finished 
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | transexitcode: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | exeerrorcode: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,322 | INFO     | exeerrordiag: 
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | exitcode: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | exitmsg: OK
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | cpuconsumptiontime: 49592 s
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | nevents: 400
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | neventsw: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,323 | INFO     | pid: 2801
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | pgrp: 2801
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | corecount: 12
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | event service: False
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | sizes: {0: 2283758, 1: 2284275, 12: 2284275, 4651: 2310351, 4653: 2319349, 4654: 2319405, 4655: 2319727}
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | --------------------------------------------------
[2026-01-26 14:59:34] 2026-01-26 19:59:02,324 | INFO     | 
[2026-01-26 14:59:34] 2026-01-26 19:59:02,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 14:59:34] 2026-01-26 19:59:02,349 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:59:34] 2026-01-26 19:59:02,353 | INFO     | job 6983304253 has completed (purged errors)
[2026-01-26 14:59:34] 2026-01-26 19:59:02,353 | INFO     | overall cleanup function is called
[2026-01-26 14:59:34] 2026-01-26 19:59:03,361 | INFO     | --- collectZombieJob: --- 10, [2801]
[2026-01-26 14:59:34] 2026-01-26 19:59:03,362 | INFO     | zombie collector waiting for pid 2801
[2026-01-26 14:59:34] 2026-01-26 19:59:03,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:59:34] 2026-01-26 19:59:03,362 | INFO     | collected zombie processes
[2026-01-26 14:59:34] 2026-01-26 19:59:03,362 | INFO     | will attempt to kill all subprocesses of pid=2801
[2026-01-26 14:59:34] 2026-01-26 19:59:03,450 | INFO     | process IDs to be killed: [2801] (in reverse order)
[2026-01-26 14:59:34] 2026-01-26 19:59:03,500 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:59:34] 2026-01-26 19:59:03,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:59:34] 2026-01-26 19:59:03,504 | INFO     | did not find any defunct processes belonging to 2801
[2026-01-26 14:59:34] 2026-01-26 19:59:03,508 | INFO     | did not find any defunct processes belonging to 2801
[2026-01-26 14:59:34] 2026-01-26 19:59:03,508 | INFO     | ready for new job
[2026-01-26 14:59:34] 2026-01-26 19:59:03,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:59:34] 2026-01-26 19:59:03,509 | INFO     | **************************************
[2026-01-26 14:59:34] 2026-01-26 19:59:03,509 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:59:34] 2026-01-26 19:59:03,510 | INFO     | **************************************
[2026-01-26 14:59:34] 2026-01-26 19:59:03,510 | INFO     | 
[2026-01-26 14:59:34] 2026-01-26 19:59:03,510 | INFO     | architecture information:
[2026-01-26 14:59:34] 2026-01-26 19:59:03,511 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:59:34] 2026-01-26 19:59:03,525 | INFO     | cat /etc/os-release:
[2026-01-26 14:59:34] NAME="CentOS Linux"
[2026-01-26 14:59:34] VERSION="7 (Core)"
[2026-01-26 14:59:34] ID="centos"
[2026-01-26 14:59:34] ID_LIKE="rhel fedora"
[2026-01-26 14:59:34] VERSION_ID="7"
[2026-01-26 14:59:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:59:34] ANSI_COLOR="0;31"
[2026-01-26 14:59:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:59:34] HOME_URL="https://www.centos.org/"
[2026-01-26 14:59:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:59:34] 
[2026-01-26 14:59:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:59:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:59:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:59:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:59:34] 
[2026-01-26 14:59:34] 2026-01-26 19:59:03,526 | INFO     | **************************************
[2026-01-26 14:59:34] 2026-01-26 19:59:03,943 | WARNING  | process 2801 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:59:34] 2026-01-26 19:59:04,014 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:59:34] 2026-01-26 19:59:04,015 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:59:34] 2026-01-26 19:59:04,015 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 14:59:34] 2026-01-26 19:59:04,015 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 14:59:34] 2026-01-26 19:59:04,016 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983304253/payload.stdout) since it has not been created yet
[2026-01-26 14:59:34] 2026-01-26 19:59:04,016 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:59:34] 2026-01-26 19:59:04,029 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:59:34] 2026-01-26 19:59:04,033 | INFO     | sufficient remaining disk space (28775022592 B)
[2026-01-26 14:59:34] 2026-01-26 19:59:04,033 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 14:59:34] 2026-01-26 19:59:04,034 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983304253/HITS.48318042._000592.pool.root.1 since it does not exist
[2026-01-26 14:59:34] 2026-01-26 19:59:04,043 | INFO     | sufficient remaining disk space (28775022592 B)
[2026-01-26 14:59:34] 2026-01-26 19:59:04,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:59:34] 2026-01-26 19:59:04,044 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:59:34] 2026-01-26 19:59:04,044 | INFO     | update_server=False
[2026-01-26 14:59:34] 2026-01-26 19:59:04,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:59:34] 2026-01-26 19:59:04,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:59:34] 2026-01-26 19:59:04,124 | INFO     | number of running child processes to parent process 2801: 1
[2026-01-26 14:59:34] 2026-01-26 19:59:04,124 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:59:34] 2026-01-26 19:59:04,124 | INFO     | aborting job monitoring since job object (job id=6983304253) has expired
[2026-01-26 14:59:34] 2026-01-26 19:59:04,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:59:34] 2026-01-26 19:59:04,124 | INFO     | will abort loop
[2026-01-26 14:59:34] 2026-01-26 19:59:04,161 | INFO     | all payload control threads have been joined
[2026-01-26 14:59:34] 2026-01-26 19:59:04,571 | INFO     | all data control threads have been joined
[2026-01-26 14:59:34] 2026-01-26 19:59:04,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:59:34] 2026-01-26 19:59:05,049 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,050 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,128 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,160 | INFO     | all job control threads have been joined
[2026-01-26 14:59:34] 2026-01-26 19:59:05,167 | INFO     | [payload] control thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,276 | INFO     | [job] validate thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,538 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,576 | INFO     | [data] control thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,578 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,845 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:05,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:06,112 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:06,165 | INFO     | [job] control thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:06,449 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:06,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:59:34] 2026-01-26 19:59:06,598 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:07,000 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:10,601 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:59:34] 2026-01-26 19:59:21,982 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:59:34] 2026-01-26 19:59:23,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133823461184)>', '<ExcThread(monitor, started 140132493551360)>']
[2026-01-26 14:59:34] 2026-01-26 19:59:28,766 | INFO     | all workflow threads have been joined
[2026-01-26 14:59:34] 2026-01-26 19:59:28,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:59:34] 2026-01-26 19:59:28,766 | INFO     | traces error code: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:28,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:59:34] 2026-01-26 19:59:34,143 | INFO     | PID=30730 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 14:59:34] 2026-01-26 19:59:34,144 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:59:34] 2026-01-26 19:59:34,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:59:34] 2026-01-26 19:59:34,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:59:34] 2026-01-26 19:59:34,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:59:34] 2026-01-26 19:59:34,144 | INFO     | [monitor] control thread has ended
[2026-01-26 14:59:34] 2026-01-26 19:59:34,230 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:59:34] 2026-01-26 19:59:34,234 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:59:34] 2026-01-26 19:59:34,237 [wrapper] pilotpid: 30730
[2026-01-26 14:59:34] 2026-01-26 19:59:34,241 [wrapper] Pilot exit status: 0
[2026-01-26 14:59:34] 2026-01-26 19:59:34,257 [wrapper] pandaids: 6983304253
[2026-01-26 14:59:34] 2026-01-26 19:59:34,296 [wrapper] cleanup supervisor_pilot 24920 30731
[2026-01-26 14:59:34] 2026-01-26 19:59:34,300 [wrapper] Test setup, not cleaning
[2026-01-26 14:59:34] 2026-01-26 19:59:34,303 [wrapper] apfmon messages muted
[2026-01-26 14:59:34] 2026-01-26 19:59:34,307 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:59:34] 2026-01-26 19:59:34,311 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:59:34]  *** Error codes and diagnostics ***
[2026-01-26 14:59:34]     "exeErrorCode": 0,
[2026-01-26 14:59:34]     "exeErrorDiag": "",
[2026-01-26 14:59:34]     "pilotErrorCode": 0,
[2026-01-26 14:59:34]     "pilotErrorDiag": "",
[2026-01-26 14:59:34]  *** Listing of results directory ***
[2026-01-26 14:59:34] total 680192
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 14:59:34] -rwx------ 1 boincer umatlas     36322 Jan 25 11:29 runpilot2-wrapper.sh
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 11:30 queuedata.json
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas       100 Jan 26 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:59:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 13:40 run_atlas
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas       105 Jan 26 13:40 job.xml
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas 505384035 Jan 26 13:40 EVNT.48318040._000012.pool.root.1
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 13:40 start_atlas.sh
[2026-01-26 14:59:34] drwxrwx--x 2 boincer umatlas      4096 Jan 26 13:40 shared
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 13:40 input.tar.gz
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas         0 Jan 26 13:40 boinc_lockfile
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas      2531 Jan 26 13:40 pandaJob.out
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas        57 Jan 26 13:40 setup.sh.local
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas   1006384 Jan 26 13:41 agis_schedconf.cvmfs.json
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas   1516246 Jan 26 13:41 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas       434 Jan 26 13:41 workernode_map.json
[2026-01-26 14:59:34] drwx------ 5 boincer umatlas      4096 Jan 26 13:41 pilot3
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 14:58 init_data.xml
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas 185014006 Jan 26 14:58 HITS.48318042._000592.pool.root.1
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas       530 Jan 26 14:58 boinc_task_state.xml
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas      1043 Jan 26 14:58 memory_monitor_summary.json
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas    413791 Jan 26 14:58 log.48318042._000592.job.log.tgz.1
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas      6419 Jan 26 14:59 heartbeat.json
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 14:59 boinc_mmap_file
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas        27 Jan 26 14:59 wrapper_checkpoint.txt
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas        95 Jan 26 14:59 pilot_heartbeat.json
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas       745 Jan 26 14:59 pilotlog.txt
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas    677784 Jan 26 14:59 log.48318042._000592.job.log.1
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas       357 Jan 26 14:59 output.list
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas       620 Jan 26 14:59 runtime_log
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas   1105920 Jan 26 14:59 result.tar.gz
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas       659 Jan 26 14:59 xvPMDmfAI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKw7KDmywkw1m.diag
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 14:59 runtime_log.err
[2026-01-26 14:59:34] -rw-r--r-- 1 boincer umatlas     22059 Jan 26 14:59 stderr.txt
[2026-01-26 14:59:34] HITS file was successfully produced:
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas 185014006 Jan 26 14:58 shared/HITS.pool.root.1
[2026-01-26 14:59:34]  *** Contents of shared directory: ***
[2026-01-26 14:59:34] total 675904
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas 505384035 Jan 26 13:40 ATLAS.root_0
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 13:40 start_atlas.sh
[2026-01-26 14:59:34] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 13:40 input.tar.gz
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas 185014006 Jan 26 14:58 HITS.pool.root.1
[2026-01-26 14:59:34] -rw------- 1 boincer umatlas   1105920 Jan 26 14:59 result.tar.gz
14:59:35 (26981): run_atlas exited; CPU time 49575.690621
14:59:35 (26981): called boinc_finish(0)

</stderr_txt>
]]>

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